The gene/protein map for NC_008750 is currently unavailable.
Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120598218

Identifier: 120598218

GI number: 120598218

Start: 1584534

End: 1585160

Strand: Direct

Name: 120598218

Synonym: Sputw3181_1395

Alternate gene names: NA

Gene position: 1584534-1585160 (Clockwise)

Preceding gene: 120598217

Following gene: 120598222

Centisome position: 33.65

GC content: 34.29

Gene sequence:

>627_bases
GTGATTGCAGCTGCAGGTATGGGAGCGAGAATTGGTCTTGGCATTCCGAAATGTATGATTGATATTGAAGGAGCAAATCT
CTTATCAAGGTTGATTAATTTACTTGATAGCTATTGCAAAAATATAGTTGTAGTTGTTGGTTATCGTGAAGAAATGGTTG
TTGAATATTGTTCTGTTTATCACCGTAATGTTATTATTGCAAGAAATCCTGATTATGCAACGACTAATACAGCTTATAGT
TATTATCAAGGAGCTAAAAATTTAGTAGGGAAAACATTATATATAGATGGTGATCTATTAGTTGAAAAAAATAGCATGCT
AGCTTTTCTTAAGAGTGCAAGCTCTGTTGATGTTTTAATAGGGGTGGCAAAAGCAAATAGTGAACAAGCTGTATACGTTG
GGTTGGAAGGCGAATCTGTCACCTATTTTAATCGAAATTATCAAGGTGAAGAGTATGAGTGGGCAAATGTTTTTGTCGCG
CCTAGTAACTTCTTGACAAAAATAGATGGTTATGTTTTTGAATCAATAGAGTTAACTTTACCACTTCCTTCAAAAGAGAT
CGTATTAAGGGAAGTTGATACTAAAGATGATCTAGAACAAGCTATTCTATTTTGTCGTTCTTGGTGA

Upstream 100 bases:

>100_bases
TTGCATTTGGGGCGATTCATCACCCTCCTAAATCACTCGTAAATTTAGCAAATTATATTGTTCATAGTGGGGATTCTTTA
TGCAACTTATTGAAAATGTT

Downstream 100 bases:

>100_bases
TCTTTTTAAGATGGAATATTAAAAGTAGATAGTTATTTCTATCTGCTTTTAAGTTGAAAACTCTGCTCGAATGGGTTGCT
TTTGTAATAAAATGGGGATT

Product: putative sugar nucleotidyltransferase

Products: NA

Alternate protein names: Nucleotidyl Transferase

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MIAAAGMGARIGLGIPKCMIDIEGANLLSRLINLLDSYCKNIVVVVGYREEMVVEYCSVYHRNVIIARNPDYATTNTAYS
YYQGAKNLVGKTLYIDGDLLVEKNSMLAFLKSASSVDVLIGVAKANSEQAVYVGLEGESVTYFNRNYQGEEYEWANVFVA
PSNFLTKIDGYVFESIELTLPLPSKEIVLREVDTKDDLEQAILFCRSW

Sequences:

>Translated_208_residues
MIAAAGMGARIGLGIPKCMIDIEGANLLSRLINLLDSYCKNIVVVVGYREEMVVEYCSVYHRNVIIARNPDYATTNTAYS
YYQGAKNLVGKTLYIDGDLLVEKNSMLAFLKSASSVDVLIGVAKANSEQAVYVGLEGESVTYFNRNYQGEEYEWANVFVA
PSNFLTKIDGYVFESIELTLPLPSKEIVLREVDTKDDLEQAILFCRSW
>Mature_208_residues
MIAAAGMGARIGLGIPKCMIDIEGANLLSRLINLLDSYCKNIVVVVGYREEMVVEYCSVYHRNVIIARNPDYATTNTAYS
YYQGAKNLVGKTLYIDGDLLVEKNSMLAFLKSASSVDVLIGVAKANSEQAVYVGLEGESVTYFNRNYQGEEYEWANVFVA
PSNFLTKIDGYVFESIELTLPLPSKEIVLREVDTKDDLEQAILFCRSW

Specific function: Unknown

COG id: COG1213

COG function: function code M; Predicted sugar nucleotidyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23184; Mature: 23184

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAAAGMGARIGLGIPKCMIDIEGANLLSRLINLLDSYCKNIVVVVGYREEMVVEYCSVY
CEECCCCCCEECCCCCEEEEEECCHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHH
HRNVIIARNPDYATTNTAYSYYQGAKNLVGKTLYIDGDLLVEKNSMLAFLKSASSVDVLI
HCCEEEEECCCCCCCCCHHHHHHHHHHHCCEEEEECCEEEEECCHHEEEHHCCCCEEEEE
GVAKANSEQAVYVGLEGESVTYFNRNYQGEEYEWANVFVAPSNFLTKIDGYVFESIELTL
EEEECCCCCEEEEEECCCEEEEECCCCCCCCEEEEEEEEECCHHHHHHCCEEEEEEEEEE
PLPSKEIVLREVDTKDDLEQAILFCRSW
CCCCCCEEEEECCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MIAAAGMGARIGLGIPKCMIDIEGANLLSRLINLLDSYCKNIVVVVGYREEMVVEYCSVY
CEECCCCCCEECCCCCEEEEEECCHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHH
HRNVIIARNPDYATTNTAYSYYQGAKNLVGKTLYIDGDLLVEKNSMLAFLKSASSVDVLI
HCCEEEEECCCCCCCCCHHHHHHHHHHHCCEEEEECCEEEEECCHHEEEHHCCCCEEEEE
GVAKANSEQAVYVGLEGESVTYFNRNYQGEEYEWANVFVAPSNFLTKIDGYVFESIELTL
EEEECCCCCEEEEEECCCEEEEECCCCCCCCEEEEEEEEECCHHHHHHCCEEEEEEEEEE
PLPSKEIVLREVDTKDDLEQAILFCRSW
CCCCCCEEEEECCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA