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The map label for this gene is rodZ [H]

Identifier: 120598177

GI number: 120598177

Start: 1533342

End: 1534427

Strand: Direct

Name: rodZ [H]

Synonym: Sputw3181_1354

Alternate gene names: 120598177

Gene position: 1533342-1534427 (Clockwise)

Preceding gene: 120598176

Following gene: 120598178

Centisome position: 32.57

GC content: 45.95

Gene sequence:

>1086_bases
ATGAAAGATCACGAAACCAACGCGTCAATTGAAGTTAACGAAACAGAAACCACGACGCCTGATGTAACGCTCGGAAATAT
TTTAAAAAATGCCCGTGAGGAAAAGGGATTCAGCATTGCCGATGCCGCAGTGAAATTGCATTTGCGTCCGGGTATTGTTG
AAGACCTTGAAGCTGATAATTTTACCAATATAGCGTCACCCACCTATGTTCGTGGTTATGTGAAAAACTATGCACGCATG
TTGGGTATTGACTATGCACCAATAGAGGCTTGCCTCGCTAAGCAAGTACCTTTAGTGACATCCCCCGCGATGCAAAGCTT
TTCACGCAAAACAACCTATCAAGCGAGCGATACTAAATTAAAGTGGGTCAGCATATTTATTGTCATCGTATTACTCGGGT
TGTTGGTTGTATGGTGGATGCAAAAATCGACGTTACTGACAACGGTCGATGTATCACAACCGACAATGGAAGAGGTTGCC
GCAGCAAACCTCACGCTACCTGGCGATGTGTTGTTGACTGAAACGGATGTTAGCCAAGGGCTGACTGATATCGCAGTCAA
TGGATCAATGTCGATAGATGGTCCCATCAAGGATACGGATGCAAACACGATTGATCCAAATCCGATGGATACTGATGTAT
TAGAGTCTAATGCGTTAACGGCCGGAAATACTCATAGTGTCGCCAGTGGTAATGTTGGTGTGCCTGCGACTTCAAATCAA
GCTGTGGTGGCTAATACTCCTCACACTAACAATGCCACAGGTAACATATCTACAGCCTCGTCTTCGGCGACCTTACCCGC
GACGAATGCGCCTACAGCGCAAGGCACAATTGCCGTTGCTGGGCAGTCTAATCTTAATATTCAACTAGCAGGTGATTGCT
GGATTAATATTGTTGATGCTCAGGGCAAAGTGTTAGTTGATGGTGTAAGAGGGGCAGGGGCAAATATCCAAGTGAACGGT
ACTGCACCGTTTAAAGTAATTTTAGGGGCCCCCCATGTAGCGACACTAAGTATGGATGGCCAAGCCGTAAGCCTAGCTGA
TTTTCCTAAAGGCCGAGTTGCTCGTTTAACGCTTCCTAAAGCGTAA

Upstream 100 bases:

>100_bases
CAATGAATGATGATGCTGCCGTTAAGAAATTTGGTATTTTATTGCTTGCCAAATTTCCAGCATCACCTCAGGCCAAGCAA
TACAGAGTTAATTTGCATCA

Downstream 100 bases:

>100_bases
GATTGACTAACAGGCGCAGCAGAACGTACCGAAATAGAGCGTATTAAGTATGTATAATGAAACTCCCATAAAAAGACGTC
CTTCCACCCGCATTTATGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MKDHETNASIEVNETETTTPDVTLGNILKNAREEKGFSIADAAVKLHLRPGIVEDLEADNFTNIASPTYVRGYVKNYARM
LGIDYAPIEACLAKQVPLVTSPAMQSFSRKTTYQASDTKLKWVSIFIVIVLLGLLVVWWMQKSTLLTTVDVSQPTMEEVA
AANLTLPGDVLLTETDVSQGLTDIAVNGSMSIDGPIKDTDANTIDPNPMDTDVLESNALTAGNTHSVASGNVGVPATSNQ
AVVANTPHTNNATGNISTASSSATLPATNAPTAQGTIAVAGQSNLNIQLAGDCWINIVDAQGKVLVDGVRGAGANIQVNG
TAPFKVILGAPHVATLSMDGQAVSLADFPKGRVARLTLPKA

Sequences:

>Translated_361_residues
MKDHETNASIEVNETETTTPDVTLGNILKNAREEKGFSIADAAVKLHLRPGIVEDLEADNFTNIASPTYVRGYVKNYARM
LGIDYAPIEACLAKQVPLVTSPAMQSFSRKTTYQASDTKLKWVSIFIVIVLLGLLVVWWMQKSTLLTTVDVSQPTMEEVA
AANLTLPGDVLLTETDVSQGLTDIAVNGSMSIDGPIKDTDANTIDPNPMDTDVLESNALTAGNTHSVASGNVGVPATSNQ
AVVANTPHTNNATGNISTASSSATLPATNAPTAQGTIAVAGQSNLNIQLAGDCWINIVDAQGKVLVDGVRGAGANIQVNG
TAPFKVILGAPHVATLSMDGQAVSLADFPKGRVARLTLPKA
>Mature_361_residues
MKDHETNASIEVNETETTTPDVTLGNILKNAREEKGFSIADAAVKLHLRPGIVEDLEADNFTNIASPTYVRGYVKNYARM
LGIDYAPIEACLAKQVPLVTSPAMQSFSRKTTYQASDTKLKWVSIFIVIVLLGLLVVWWMQKSTLLTTVDVSQPTMEEVA
AANLTLPGDVLLTETDVSQGLTDIAVNGSMSIDGPIKDTDANTIDPNPMDTDVLESNALTAGNTHSVASGNVGVPATSNQ
AVVANTPHTNNATGNISTASSSATLPATNAPTAQGTIAVAGQSNLNIQLAGDCWINIVDAQGKVLVDGVRGAGANIQVNG
TAPFKVILGAPHVATLSMDGQAVSLADFPKGRVARLTLPKA

Specific function: Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis [H]

COG id: COG1426

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein. Note=Forms helical filaments along the long axis of the cell (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788864, Length=362, Percent_Identity=28.7292817679558, Blast_Score=109, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 37817; Mature: 37817

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDHETNASIEVNETETTTPDVTLGNILKNAREEKGFSIADAAVKLHLRPGIVEDLEADN
CCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEEEECCCCHHHCCCCC
FTNIASPTYVRGYVKNYARMLGIDYAPIEACLAKQVPLVTSPAMQSFSRKTTYQASDTKL
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEECHHHHHHHHCCCCCCCCCCH
KWVSIFIVIVLLGLLVVWWMQKSTLLTTVDVSQPTMEEVAAANLTLPGDVLLTETDVSQG
HHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHCCCCCCCCEEEEECHHHCC
LTDIAVNGSMSIDGPIKDTDANTIDPNPMDTDVLESNALTAGNTHSVASGNVGVPATSNQ
CEEEEECCCEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
AVVANTPHTNNATGNISTASSSATLPATNAPTAQGTIAVAGQSNLNIQLAGDCWINIVDA
EEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCEEEEEEEC
QGKVLVDGVRGAGANIQVNGTAPFKVILGAPHVATLSMDGQAVSLADFPKGRVARLTLPK
CCCEEEEECCCCCCEEEECCCCCEEEEECCCCEEEEECCCCEEEEECCCCCCEEEEECCC
A
C
>Mature Secondary Structure
MKDHETNASIEVNETETTTPDVTLGNILKNAREEKGFSIADAAVKLHLRPGIVEDLEADN
CCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEEEECCCCHHHCCCCC
FTNIASPTYVRGYVKNYARMLGIDYAPIEACLAKQVPLVTSPAMQSFSRKTTYQASDTKL
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEECHHHHHHHHCCCCCCCCCCH
KWVSIFIVIVLLGLLVVWWMQKSTLLTTVDVSQPTMEEVAAANLTLPGDVLLTETDVSQG
HHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHCCCCCCCCEEEEECHHHCC
LTDIAVNGSMSIDGPIKDTDANTIDPNPMDTDVLESNALTAGNTHSVASGNVGVPATSNQ
CEEEEECCCEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
AVVANTPHTNNATGNISTASSSATLPATNAPTAQGTIAVAGQSNLNIQLAGDCWINIVDA
EEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCEEEEEEEC
QGKVLVDGVRGAGANIQVNGTAPFKVILGAPHVATLSMDGQAVSLADFPKGRVARLTLPK
CCCEEEEECCCCCCEEEECCCCCEEEEECCCCEEEEECCCCEEEEECCCCCCEEEEECCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA