| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is 120598167
Identifier: 120598167
GI number: 120598167
Start: 1524334
End: 1524636
Strand: Direct
Name: 120598167
Synonym: Sputw3181_1344
Alternate gene names: NA
Gene position: 1524334-1524636 (Clockwise)
Preceding gene: 120598166
Following gene: 120598168
Centisome position: 32.37
GC content: 40.59
Gene sequence:
>303_bases ATGATGGCAAAATTAGTAAAATTAGCAGCAGTAGCAACCTTAGCCTTAGGTATGTCAAGTGCTTGGGCACAGGGCGTAAC CCATGAAGGAACTGTTGTTGATACAATGAACGGCGGTGGTTACACCTATGTTCAGATTAAAGAGGCAGATCAGACTTTTT GGGCTGCAGGTCCTCAAACTGAAGTTAACAAAGGTGATAAAGTGGCCGTTGTTGAACAAATGTGGATGAACGAGTTCACC AGTAAAACATTAAATCGTACCTTCGATAAGTTGCTTTTTGTTGGACAAATCGAAAAGAAATAA
Upstream 100 bases:
>100_bases ACTTTTGCGATAGGTGTTGTATTTCGTGATAGAGATTGGCGATTTATTGCTTTTGACATGCTTTAATGAAGCATATTAGC AAAACAAAAGGAACGTAGGC
Downstream 100 bases:
>100_bases TCGCGTTAATATTGCCATTGGCGAACGCCAGTTATTAAACGGCCTCGAAAATTTCGAGGCCGTTTTGTTTTCAGTGGCGT ATTCCCTGCTTATTTAGAGT
Product: NrfJ-like protein
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MMAKLVKLAAVATLALGMSSAWAQGVTHEGTVVDTMNGGGYTYVQIKEADQTFWAAGPQTEVNKGDKVAVVEQMWMNEFT SKTLNRTFDKLLFVGQIEKK
Sequences:
>Translated_100_residues MMAKLVKLAAVATLALGMSSAWAQGVTHEGTVVDTMNGGGYTYVQIKEADQTFWAAGPQTEVNKGDKVAVVEQMWMNEFT SKTLNRTFDKLLFVGQIEKK >Mature_100_residues MMAKLVKLAAVATLALGMSSAWAQGVTHEGTVVDTMNGGGYTYVQIKEADQTFWAAGPQTEVNKGDKVAVVEQMWMNEFT SKTLNRTFDKLLFVGQIEKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10960; Mature: 10960
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMAKLVKLAAVATLALGMSSAWAQGVTHEGTVVDTMNGGGYTYVQIKEADQTFWAAGPQT CHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCEEEECCCCCEEEEEEECCCCEEECCCCCC EVNKGDKVAVVEQMWMNEFTSKTLNRTFDKLLFVGQIEKK CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MMAKLVKLAAVATLALGMSSAWAQGVTHEGTVVDTMNGGGYTYVQIKEADQTFWAAGPQT CHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCEEEECCCCCEEEEEEECCCCEEECCCCCC EVNKGDKVAVVEQMWMNEFTSKTLNRTFDKLLFVGQIEKK CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA