The gene/protein map for NC_008750 is currently unavailable.
Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120598128

Identifier: 120598128

GI number: 120598128

Start: 1489088

End: 1489660

Strand: Direct

Name: 120598128

Synonym: Sputw3181_1305

Alternate gene names: NA

Gene position: 1489088-1489660 (Clockwise)

Preceding gene: 120598127

Following gene: 120598129

Centisome position: 31.63

GC content: 41.54

Gene sequence:

>573_bases
ATGACGCTGAAAAAGTTAGTCTGTTTGTACTCTTACTTTGTATTTGTAGGAACTATGCCATTTGGGACATTATCTGCGCA
GGATAAAGCCCCTCAATCTGCCAAGGCTATATCCGTTCAGCATTTGAACTCACCTTTGATTGAAGTTGGGCGAGGAGAGA
TGGATTGGCTATGGTTGAGTTTATACAAAGCGAAGTTGATGACTGCTACAGGACATTATCAACAGGAGCAGTACCCCCAA
TTATTAGAGATTGAGTATTATCGCGACATTGATTCTGAGGATCTTTTGCAAGCAACACGGGAACAGTGGCAAAAACTAGG
ATTTTCTAAGACCGATATTGAACGCTGGCTGAGTGTATTAGCGTCTATCTGGCCCGATGTAAAGCAAGGTGATTACTTGA
GCTTTATGGTTATCGATGGGAAAACTAGCCAATTTTTTTATAACCAGCAACCGCTTAATATGATTGATGATGCGCATTTT
GCCCAAGCTTTTTTAGCCATTTGGTTATCACCTAAAACAAGCCGCCCGAGTTTGAGGGCACAATTACTCGGAGAAAAATC
ATGCGACTGTTAA

Upstream 100 bases:

>100_bases
ACTGCACCTTACGCATTCAAATAGCCTGATGGCTTTTAAGACGCTGTTATTGAGTTGCCAAAGAGTATTCAATCGTGGCA
CGGATAGAAGGTTATAACCT

Downstream 100 bases:

>100_bases
AACACTTTTTGGGGCAAAAATGGATTTTGGTTTTATTGATGATTACGGGGCTTTCGAGTTGTTCATCGGTTGAGGTGACT
GATTACCAAGAGACTCATCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MTLKKLVCLYSYFVFVGTMPFGTLSAQDKAPQSAKAISVQHLNSPLIEVGRGEMDWLWLSLYKAKLMTATGHYQQEQYPQ
LLEIEYYRDIDSEDLLQATREQWQKLGFSKTDIERWLSVLASIWPDVKQGDYLSFMVIDGKTSQFFYNQQPLNMIDDAHF
AQAFLAIWLSPKTSRPSLRAQLLGEKSCDC

Sequences:

>Translated_190_residues
MTLKKLVCLYSYFVFVGTMPFGTLSAQDKAPQSAKAISVQHLNSPLIEVGRGEMDWLWLSLYKAKLMTATGHYQQEQYPQ
LLEIEYYRDIDSEDLLQATREQWQKLGFSKTDIERWLSVLASIWPDVKQGDYLSFMVIDGKTSQFFYNQQPLNMIDDAHF
AQAFLAIWLSPKTSRPSLRAQLLGEKSCDC
>Mature_189_residues
TLKKLVCLYSYFVFVGTMPFGTLSAQDKAPQSAKAISVQHLNSPLIEVGRGEMDWLWLSLYKAKLMTATGHYQQEQYPQL
LEIEYYRDIDSEDLLQATREQWQKLGFSKTDIERWLSVLASIWPDVKQGDYLSFMVIDGKTSQFFYNQQPLNMIDDAHFA
QAFLAIWLSPKTSRPSLRAQLLGEKSCDC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21892; Mature: 21761

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLKKLVCLYSYFVFVGTMPFGTLSAQDKAPQSAKAISVQHLNSPLIEVGRGEMDWLWLS
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHCCCCHHHHHHH
LYKAKLMTATGHYQQEQYPQLLEIEYYRDIDSEDLLQATREQWQKLGFSKTDIERWLSVL
HHHHHHHHHCCCCCHHCCCCCEEEHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
ASIWPDVKQGDYLSFMVIDGKTSQFFYNQQPLNMIDDAHFAQAFLAIWLSPKTSRPSLRA
HHHCCCCCCCCEEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHH
QLLGEKSCDC
HHHCCCCCCC
>Mature Secondary Structure 
TLKKLVCLYSYFVFVGTMPFGTLSAQDKAPQSAKAISVQHLNSPLIEVGRGEMDWLWLS
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHCCCCHHHHHHH
LYKAKLMTATGHYQQEQYPQLLEIEYYRDIDSEDLLQATREQWQKLGFSKTDIERWLSVL
HHHHHHHHHCCCCCHHCCCCCEEEHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
ASIWPDVKQGDYLSFMVIDGKTSQFFYNQQPLNMIDDAHFAQAFLAIWLSPKTSRPSLRA
HHHCCCCCCCCEEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHH
QLLGEKSCDC
HHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]