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The map label for this gene is traU [H]

Identifier: 120597967

GI number: 120597967

Start: 1292672

End: 1293700

Strand: Direct

Name: traU [H]

Synonym: Sputw3181_1144

Alternate gene names: 120597967

Gene position: 1292672-1293700 (Clockwise)

Preceding gene: 120597966

Following gene: 120597968

Centisome position: 27.45

GC content: 50.63

Gene sequence:

>1029_bases
ATGAAAAAGCTCAATAATACGTATCGTCTGTTGCGGACTCTCATTGTCATGTTTGTCCTTGGCGCATCTATTCCTGCAAA
AGCCGAACTGACCTGCCCAGACGCGGGTTTATTGTCGGGTAAGTTGCTGACGGATGTTTGCTGGTCATGCATTTTTCCTA
TCCGAGTTGCGGGTCTTCCTCTTGGCTCTGGCAGTGTCCCAAGCGGCGCATCAAACAAGTCATTTTGCTTATGTGAAGAT
AACTTAGGCGTGCCAAGGCCAGGTATTGTTACCAGCATGTGGGAGCCAGCGCGTTTAATTGAACTGGTCAGAACGCCGGG
TTGCTCGCCTTCCCTGGGAGGGATTCGTTTACCGTTAGGTGATAGGCGGCTGCAAGGTGGTCATGGCGAGGGTGAATACG
ATACCGGTGATCTCGCTTTCTACCATTACCATTATTACGCCTTTCCGCTTTTGGTCATGCTCGATTTGTTCATGGATGGC
AATTGCAATGCCGATGGTTACATGGACTTTGACTTGATGTATTTGTCCGAATTGGACCCCACATGGATGAACGATGAACT
GGCCTTTTTTACTCAGCCTGAAGCTGCTGCCGTTGCCAATCCATTGGCTATATCTGCTTGTACCGCTGACGCTGCTTCAT
CAACGCTTGGTAAACCCATCGATCAGTTGTTTTGGTGTGCTGGCAGTTGGGGCCATCTCTATCCCTTATCTGGCCACACC
TTAGCCTTTGGCTCATTAGCAGAAAACACCAGCCATTTAGCAGCGCGAGCAATCGCGGCTCAACACAGGCGTGGTCTTGC
AAGGCGAACAATGGGGAACAGTGCGCTATGCCGACCTGTTATCGAACCCATGCTGCCGAAATCCCAATACAAGATGAGTA
TGTTCTTCCCTGTACCGGAAACTGAAAGTGCGCATGTCATCGGTGAAAGCACCATGAAATGGGGAGAGTGGCGAACGATC
CCCGGTGCCGGTGAAGATGCGCTCTACATTTTGTGGCGCTGGCAAGACTGCTGTAACTCGGGAGGTTAA

Upstream 100 bases:

>100_bases
TCGCTAAAGCAGCGCTTTGATTTGCAAGTCACCCCGTCGTTTGTTCAAGCAAAGGGGCTCGCGTTTGAAATAGAAGAAAT
TCCAGCAAAGGAGCTTGTTC

Downstream 100 bases:

>100_bases
CCATGAAACCAACACTTTTTACCCGAGTTTTAGCGGGTATTTTATCAATCACTATGGCGTGCCTGCCCTTACATGGTGTG
GCCGCTGATGTGCAGCGCCA

Product: TraU family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MKKLNNTYRLLRTLIVMFVLGASIPAKAELTCPDAGLLSGKLLTDVCWSCIFPIRVAGLPLGSGSVPSGASNKSFCLCED
NLGVPRPGIVTSMWEPARLIELVRTPGCSPSLGGIRLPLGDRRLQGGHGEGEYDTGDLAFYHYHYYAFPLLVMLDLFMDG
NCNADGYMDFDLMYLSELDPTWMNDELAFFTQPEAAAVANPLAISACTADAASSTLGKPIDQLFWCAGSWGHLYPLSGHT
LAFGSLAENTSHLAARAIAAQHRRGLARRTMGNSALCRPVIEPMLPKSQYKMSMFFPVPETESAHVIGESTMKWGEWRTI
PGAGEDALYILWRWQDCCNSGG

Sequences:

>Translated_342_residues
MKKLNNTYRLLRTLIVMFVLGASIPAKAELTCPDAGLLSGKLLTDVCWSCIFPIRVAGLPLGSGSVPSGASNKSFCLCED
NLGVPRPGIVTSMWEPARLIELVRTPGCSPSLGGIRLPLGDRRLQGGHGEGEYDTGDLAFYHYHYYAFPLLVMLDLFMDG
NCNADGYMDFDLMYLSELDPTWMNDELAFFTQPEAAAVANPLAISACTADAASSTLGKPIDQLFWCAGSWGHLYPLSGHT
LAFGSLAENTSHLAARAIAAQHRRGLARRTMGNSALCRPVIEPMLPKSQYKMSMFFPVPETESAHVIGESTMKWGEWRTI
PGAGEDALYILWRWQDCCNSGG
>Mature_342_residues
MKKLNNTYRLLRTLIVMFVLGASIPAKAELTCPDAGLLSGKLLTDVCWSCIFPIRVAGLPLGSGSVPSGASNKSFCLCED
NLGVPRPGIVTSMWEPARLIELVRTPGCSPSLGGIRLPLGDRRLQGGHGEGEYDTGDLAFYHYHYYAFPLLVMLDLFMDG
NCNADGYMDFDLMYLSELDPTWMNDELAFFTQPEAAAVANPLAISACTADAASSTLGKPIDQLFWCAGSWGHLYPLSGHT
LAFGSLAENTSHLAARAIAAQHRRGLARRTMGNSALCRPVIEPMLPKSQYKMSMFFPVPETESAHVIGESTMKWGEWRTI
PGAGEDALYILWRWQDCCNSGG

Specific function: Appears to be more essential to conjugal DNA transfer than to assembly of pilus filaments. Required for F plasmid conjugative transfer [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009649 [H]

Pfam domain/function: PF06834 TraU [H]

EC number: NA

Molecular weight: Translated: 37281; Mature: 37281

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLNNTYRLLRTLIVMFVLGASIPAKAELTCPDAGLLSGKLLTDVCWSCIFPIRVAGLP
CCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCC
LGSGSVPSGASNKSFCLCEDNLGVPRPGIVTSMWEPARLIELVRTPGCSPSLGGIRLPLG
CCCCCCCCCCCCCEEEEEECCCCCCCCCCHHCCCCHHHHHHHHHCCCCCCCCCCEECCCC
DRRLQGGHGEGEYDTGDLAFYHYHYYAFPLLVMLDLFMDGNCNADGYMDFDLMYLSELDP
CCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEHHCCC
TWMNDELAFFTQPEAAAVANPLAISACTADAASSTLGKPIDQLFWCAGSWGHLYPLSGHT
CCCCCCEEEEECCCHHHHCCCCEEEECCCHHHHHHHCCHHHHHHHHCCCCCCEEECCCCE
LAFGSLAENTSHLAARAIAAQHRRGLARRTMGNSALCRPVIEPMLPKSQYKMSMFFPVPE
EEECHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEECCCC
TESAHVIGESTMKWGEWRTIPGAGEDALYILWRWQDCCNSGG
CCCCEEECCCCCCCCCEEECCCCCCCEEEEEEEEHHHHCCCC
>Mature Secondary Structure
MKKLNNTYRLLRTLIVMFVLGASIPAKAELTCPDAGLLSGKLLTDVCWSCIFPIRVAGLP
CCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCC
LGSGSVPSGASNKSFCLCEDNLGVPRPGIVTSMWEPARLIELVRTPGCSPSLGGIRLPLG
CCCCCCCCCCCCCEEEEEECCCCCCCCCCHHCCCCHHHHHHHHHCCCCCCCCCCEECCCC
DRRLQGGHGEGEYDTGDLAFYHYHYYAFPLLVMLDLFMDGNCNADGYMDFDLMYLSELDP
CCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEHHCCC
TWMNDELAFFTQPEAAAVANPLAISACTADAASSTLGKPIDQLFWCAGSWGHLYPLSGHT
CCCCCCEEEEECCCHHHHCCCCEEEECCCHHHHHHHCCHHHHHHHHCCCCCCEEECCCCE
LAFGSLAENTSHLAARAIAAQHRRGLARRTMGNSALCRPVIEPMLPKSQYKMSMFFPVPE
EEECHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEECCCC
TESAHVIGESTMKWGEWRTIPGAGEDALYILWRWQDCCNSGG
CCCCEEECCCCCCCCCEEECCCCCCCEEEEEEEEHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2198250; 7915817; 2050638; 1355084 [H]