Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597885

Identifier: 120597885

GI number: 120597885

Start: 1200069

End: 1200581

Strand: Direct

Name: 120597885

Synonym: Sputw3181_1055

Alternate gene names: NA

Gene position: 1200069-1200581 (Clockwise)

Preceding gene: 120597884

Following gene: 120597886

Centisome position: 25.49

GC content: 45.81

Gene sequence:

>513_bases
ATGCGTTATCTTATTTGCACCATTGCAGCCAGTGCAATGTTAATGAGCTCAGCGGCATTTGCTGCGCCGAAAATGACAGT
TGATTTGACTTTACCTGAAATTACCGAAGGGCAATACCATAGGCCTTATGTTGCTGTATGGGTTGAAAACGCCCAAGGGC
AACCTGTTAAAACCTTAAGTCTATGGGTATGGAATGAAGGGTATAAATGGCTAAAAGATATCCGTCGCTGGTGGCGTAAA
GCGGGGCGTGAAGATATGAGTTTTGTGGATGGTATCGCGTCAGCTACCCGTCCAGCAGGCCGATACAAAATTGATTGGGA
TCTAAAAGATGACGCTGGTAAATCCATAGAACTTGGTACTTACACACTCTTTGTTGAAGTGGTGCGTGAGCATGGGGGGC
GTGATTTAGTGCGTCAAAATATTGATTTGAGCGCGGGGGACTTTTCGGTACAGATCCCTGCAACAACTGAAACTGGCATT
ATCGATATCCGCTTAAGCGGAATGACTCGCTAA

Upstream 100 bases:

>100_bases
AACAAAACGTCTTAAAAAATCATTGCTATACATGGTGTTAGTCAGCGGAAGCTGCGGACTTGTGTATGTTTATTTTGTTC
CATAAGGAGTGTAGGCGAGT

Downstream 100 bases:

>100_bases
GCTCGCTATAGTTGATTGTTTAACTTAAGGAAAAAATATGAAATTACGTCTGATTGCATTATTCACCTCGCTCTGCATTA
GCCCTTTGGCAAGCAGCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MRYLICTIAASAMLMSSAAFAAPKMTVDLTLPEITEGQYHRPYVAVWVENAQGQPVKTLSLWVWNEGYKWLKDIRRWWRK
AGREDMSFVDGIASATRPAGRYKIDWDLKDDAGKSIELGTYTLFVEVVREHGGRDLVRQNIDLSAGDFSVQIPATTETGI
IDIRLSGMTR

Sequences:

>Translated_170_residues
MRYLICTIAASAMLMSSAAFAAPKMTVDLTLPEITEGQYHRPYVAVWVENAQGQPVKTLSLWVWNEGYKWLKDIRRWWRK
AGREDMSFVDGIASATRPAGRYKIDWDLKDDAGKSIELGTYTLFVEVVREHGGRDLVRQNIDLSAGDFSVQIPATTETGI
IDIRLSGMTR
>Mature_170_residues
MRYLICTIAASAMLMSSAAFAAPKMTVDLTLPEITEGQYHRPYVAVWVENAQGQPVKTLSLWVWNEGYKWLKDIRRWWRK
AGREDMSFVDGIASATRPAGRYKIDWDLKDDAGKSIELGTYTLFVEVVREHGGRDLVRQNIDLSAGDFSVQIPATTETGI
IDIRLSGMTR

Specific function: Unknown

COG id: COG3656

COG function: function code S; Predicted periplasmic protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19200; Mature: 19200

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYLICTIAASAMLMSSAAFAAPKMTVDLTLPEITEGQYHRPYVAVWVENAQGQPVKTLS
CEEEEEEHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCEEEEE
LWVWNEGYKWLKDIRRWWRKAGREDMSFVDGIASATRPAGRYKIDWDLKDDAGKSIELGT
EEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEECHH
YTLFVEVVREHGGRDLVRQNIDLSAGDFSVQIPATTETGIIDIRLSGMTR
HHHHHHHHHHCCCHHHHHHCCCCCCCCEEEEECCCCCCCEEEEEECCCCC
>Mature Secondary Structure
MRYLICTIAASAMLMSSAAFAAPKMTVDLTLPEITEGQYHRPYVAVWVENAQGQPVKTLS
CEEEEEEHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCEEEEE
LWVWNEGYKWLKDIRRWWRKAGREDMSFVDGIASATRPAGRYKIDWDLKDDAGKSIELGT
EEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEECHH
YTLFVEVVREHGGRDLVRQNIDLSAGDFSVQIPATTETGIIDIRLSGMTR
HHHHHHHHHHCCCHHHHHHCCCCCCCCEEEEECCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA