Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597846

Identifier: 120597846

GI number: 120597846

Start: 1162494

End: 1163423

Strand: Direct

Name: 120597846

Synonym: Sputw3181_1016

Alternate gene names: NA

Gene position: 1162494-1163423 (Clockwise)

Preceding gene: 120597845

Following gene: 120597849

Centisome position: 24.69

GC content: 43.23

Gene sequence:

>930_bases
ATGTTAGATGCGATTTGTGAACTCGATGTAGAGCAAGGCGACGCAATTCGAGTGACATACAGCGTATTTACGTTTCAGCA
CTTGTCCGAAGCGGATATTGAGCGTCTGCGTCAAAGGTTATTTTGCCCTGCCTGTGGCGGTAAAGCCTATTTCCGTAAAG
CCTCAAAAGATGGCAAAGCTGCCTGCTTTGGATCCCGCTATCATCAAATTGATTGCATTGAATTTAAACCTTCGGCACAA
AAATCCCGAGAAGAGCAAGATGCTATCGAAGTGCATCAACAGCTGGTGGATGCCGATGCGCTGATGATCGATTTTAGCCG
TAAACCGAGAATAGCTAAATCTAGCACTGCCAAGTCAAAGGAACACGCAGATAAAACCATACTTAATTCAGCGCAGATTG
CGGATATTGAAGTAAAAAAGGTTAACGCTGACACAGTGCAAGAAGCCCCGATGCAATATCAGGTCGACACGCCAAAAGAT
ACCCCACTCAAAGAAAAACGTGTCCCAAGCCAAGGGCTCGAAAAGTTGCTCCACAGTTTACTGCGTGGTTCCGATTTAGC
CACATCCAACCTCTGGGTATATACAGATAGTGAGCGTAAATACCGTTGGCGGGCAAAGAATCTATTTGTGAATTTTGCCG
ATGCCGATCCCACAGATAATAAGCCTCATATGTATTGGGGGACGATTTCACATACGGATCCAACCATGAATTGGCTCAAT
CCCGCAGACAGTAAAGATATAGGTATTCCTATCGATGGGGTAAAGGCAAAACTATTAAAGCAATTTGCCATTGAAGATAA
ACGTGATTTAGAAGGCGCAGGGCTGATTTTATTTGGCAAGTGTTTTTGGAATAAAGAAAAGACCCGCAAAATTATTCAGT
TATGGAATAACGATTTACAGCGAATTTTTATCTCACCAATTGAGGATTAA

Upstream 100 bases:

>100_bases
GTCATTGGGATGTTGTTTTTATTAGGACTAGTGACGTTCGGGGTTAATACATGGCTTTAAGCTCAAAAATACTTAAGCCA
TAAAAAGGGAGAGGGGCGCT

Downstream 100 bases:

>100_bases
CCGAGCTATTAATGGTTTAAATAGGATTTAGCGGGAAAAGAGAAGTGAAAAGGGGCTTATTCTCGTGGCAGCAAAAAGAC
CCTATTAAAGTGATGTACTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MLDAICELDVEQGDAIRVTYSVFTFQHLSEADIERLRQRLFCPACGGKAYFRKASKDGKAACFGSRYHQIDCIEFKPSAQ
KSREEQDAIEVHQQLVDADALMIDFSRKPRIAKSSTAKSKEHADKTILNSAQIADIEVKKVNADTVQEAPMQYQVDTPKD
TPLKEKRVPSQGLEKLLHSLLRGSDLATSNLWVYTDSERKYRWRAKNLFVNFADADPTDNKPHMYWGTISHTDPTMNWLN
PADSKDIGIPIDGVKAKLLKQFAIEDKRDLEGAGLILFGKCFWNKEKTRKIIQLWNNDLQRIFISPIED

Sequences:

>Translated_309_residues
MLDAICELDVEQGDAIRVTYSVFTFQHLSEADIERLRQRLFCPACGGKAYFRKASKDGKAACFGSRYHQIDCIEFKPSAQ
KSREEQDAIEVHQQLVDADALMIDFSRKPRIAKSSTAKSKEHADKTILNSAQIADIEVKKVNADTVQEAPMQYQVDTPKD
TPLKEKRVPSQGLEKLLHSLLRGSDLATSNLWVYTDSERKYRWRAKNLFVNFADADPTDNKPHMYWGTISHTDPTMNWLN
PADSKDIGIPIDGVKAKLLKQFAIEDKRDLEGAGLILFGKCFWNKEKTRKIIQLWNNDLQRIFISPIED
>Mature_309_residues
MLDAICELDVEQGDAIRVTYSVFTFQHLSEADIERLRQRLFCPACGGKAYFRKASKDGKAACFGSRYHQIDCIEFKPSAQ
KSREEQDAIEVHQQLVDADALMIDFSRKPRIAKSSTAKSKEHADKTILNSAQIADIEVKKVNADTVQEAPMQYQVDTPKD
TPLKEKRVPSQGLEKLLHSLLRGSDLATSNLWVYTDSERKYRWRAKNLFVNFADADPTDNKPHMYWGTISHTDPTMNWLN
PADSKDIGIPIDGVKAKLLKQFAIEDKRDLEGAGLILFGKCFWNKEKTRKIIQLWNNDLQRIFISPIED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35250; Mature: 35250

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDAICELDVEQGDAIRVTYSVFTFQHLSEADIERLRQRLFCPACGGKAYFRKASKDGKA
CCCCCEECCCCCCCEEEEEEEEHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCE
ACFGSRYHQIDCIEFKPSAQKSREEQDAIEVHQQLVDADALMIDFSRKPRIAKSSTAKSK
EEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCH
EHADKTILNSAQIADIEVKKVNADTVQEAPMQYQVDTPKDTPLKEKRVPSQGLEKLLHSL
HHHHHHHHCCCEEEEEEEEECCCHHHHHCCCEEEECCCCCCCCHHHCCCHHHHHHHHHHH
LRGSDLATSNLWVYTDSERKYRWRAKNLFVNFADADPTDNKPHMYWGTISHTDPTMNWLN
HCCCCCCCCEEEEEECCCCCEEEEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCC
PADSKDIGIPIDGVKAKLLKQFAIEDKRDLEGAGLILFGKCFWNKEKTRKIIQLWNNDLQ
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCHH
RIFISPIED
EEEECCCCC
>Mature Secondary Structure
MLDAICELDVEQGDAIRVTYSVFTFQHLSEADIERLRQRLFCPACGGKAYFRKASKDGKA
CCCCCEECCCCCCCEEEEEEEEHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCE
ACFGSRYHQIDCIEFKPSAQKSREEQDAIEVHQQLVDADALMIDFSRKPRIAKSSTAKSK
EEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCH
EHADKTILNSAQIADIEVKKVNADTVQEAPMQYQVDTPKDTPLKEKRVPSQGLEKLLHSL
HHHHHHHHCCCEEEEEEEEECCCHHHHHCCCEEEECCCCCCCCHHHCCCHHHHHHHHHHH
LRGSDLATSNLWVYTDSERKYRWRAKNLFVNFADADPTDNKPHMYWGTISHTDPTMNWLN
HCCCCCCCCEEEEEECCCCCEEEEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCC
PADSKDIGIPIDGVKAKLLKQFAIEDKRDLEGAGLILFGKCFWNKEKTRKIIQLWNNDLQ
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCHH
RIFISPIED
EEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA