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The map label for this gene is 120597845

Identifier: 120597845

GI number: 120597845

Start: 1161390

End: 1162295

Strand: Direct

Name: 120597845

Synonym: Sputw3181_1015

Alternate gene names: NA

Gene position: 1161390-1162295 (Clockwise)

Preceding gene: 120597844

Following gene: 120597846

Centisome position: 24.67

GC content: 45.58

Gene sequence:

>906_bases
ATGAAGTTAATGAAGTATTGCCTTTCACCCAATAAGTTAGCTTGGCTACGTCAGGAGCTAGGCGAGAATGCCGATGGTTT
GATTGCGGTAATGGATGCGGCGGGTAGCGCCTATTTGGTCCAAGCAGCACAGTCTGATACTTCAGTTGCAGTAGATGCTT
TGCCTAAATTAATAGGGCCTGAGCTTAAGTTATTGTGGTTTAAACAAAAGCTTGCACTTATCACTCGTCTTGATGATATT
GAGTTATCCCAATTAGCCCCTTTCGAGCTTGAGGGCGCGCGAGTTATTGTGGTTCAGCCTGATGAATTAACAACAGTGCT
GCAAAGCATAAGCAAGCAGCGTGTCATTGGGTTTGATACCGAAACTCGCGCAAGTTTTGAGCGCGGAGTGCAGCATCCCT
TAAGTTTGATCCAAATCGCGACCCATGACACCTGCTATTTGTTTCAACATGCGCTGTTAGCTGAGCAGTTAGGGTTATTA
AAACCTGTGCTTGAGGATGAGAATATTTTGAAAGTGGGTGTTGGCCTTAGAAGTGACGGTCAAGCATTAACGCGGGAGTG
GGGGATTAATGTCACGCCGAGGTTAGATTTGAACTGGGTTCTAGCACAGCTTGGGGCGGGTAAAGAAATGGGTACTCGTC
AACTGGTCGCCACGTTACTGCAAAAGCGTATCGATAAGCCTAAAAAAGTGACCCTATCGAATTGGCAACAGGTACCTCTA
ACCTCTACACAAATTGTTTATGCCGCCTTAGATGCATTGGCAGCGCAGCATTGTTTTAGCGAGTTAATCGACAAACTTAA
GCCATTTTATCTGGCATCATTAGAAGCGAATACTCAGTTGCTTACTCAAAACCTCACGGTTCGACTGGCGAGCTATTTTG
AACAGGACAATGAGGTAACGGGATGA

Upstream 100 bases:

>100_bases
TCAAAAGCTGCGTAGTTAATTGCTAGTTTTGGTGGAAGATAGTTCGATATAGGAATGGTTTCTAACGGAAGTTATTCTTT
AAGCTCTCAAGGACGGTGTC

Downstream 100 bases:

>100_bases
TTTTGAATACCAAGGAAACTCGGGCTAAGTTGAAAGCGGATCCACTTAACTCCAATGTTAGCTCACAGGGAACCAGCACT
TTGGGCTTGATATACCGAGT

Product: 3'-5' exonuclease

Products: NA

Alternate protein names: 3-5' Exonuclease Domain Protein; 3- 5' Exonuclease Domain Protein; Ribonuclease D; 3 Exoribonuclease Family Protein; Exonuclease

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MKLMKYCLSPNKLAWLRQELGENADGLIAVMDAAGSAYLVQAAQSDTSVAVDALPKLIGPELKLLWFKQKLALITRLDDI
ELSQLAPFELEGARVIVVQPDELTTVLQSISKQRVIGFDTETRASFERGVQHPLSLIQIATHDTCYLFQHALLAEQLGLL
KPVLEDENILKVGVGLRSDGQALTREWGINVTPRLDLNWVLAQLGAGKEMGTRQLVATLLQKRIDKPKKVTLSNWQQVPL
TSTQIVYAALDALAAQHCFSELIDKLKPFYLASLEANTQLLTQNLTVRLASYFEQDNEVTG

Sequences:

>Translated_301_residues
MKLMKYCLSPNKLAWLRQELGENADGLIAVMDAAGSAYLVQAAQSDTSVAVDALPKLIGPELKLLWFKQKLALITRLDDI
ELSQLAPFELEGARVIVVQPDELTTVLQSISKQRVIGFDTETRASFERGVQHPLSLIQIATHDTCYLFQHALLAEQLGLL
KPVLEDENILKVGVGLRSDGQALTREWGINVTPRLDLNWVLAQLGAGKEMGTRQLVATLLQKRIDKPKKVTLSNWQQVPL
TSTQIVYAALDALAAQHCFSELIDKLKPFYLASLEANTQLLTQNLTVRLASYFEQDNEVTG
>Mature_301_residues
MKLMKYCLSPNKLAWLRQELGENADGLIAVMDAAGSAYLVQAAQSDTSVAVDALPKLIGPELKLLWFKQKLALITRLDDI
ELSQLAPFELEGARVIVVQPDELTTVLQSISKQRVIGFDTETRASFERGVQHPLSLIQIATHDTCYLFQHALLAEQLGLL
KPVLEDENILKVGVGLRSDGQALTREWGINVTPRLDLNWVLAQLGAGKEMGTRQLVATLLQKRIDKPKKVTLSNWQQVPL
TSTQIVYAALDALAAQHCFSELIDKLKPFYLASLEANTQLLTQNLTVRLASYFEQDNEVTG

Specific function: Unknown

COG id: COG0349

COG function: function code J; Ribonuclease D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI110735439, Length=149, Percent_Identity=34.2281879194631, Blast_Score=75, Evalue=7e-14,
Organism=Drosophila melanogaster, GI21356549, Length=172, Percent_Identity=31.3953488372093, Blast_Score=79, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33388; Mature: 33388

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLMKYCLSPNKLAWLRQELGENADGLIAVMDAAGSAYLVQAAQSDTSVAVDALPKLIGP
CCHHHHHCCCCHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHCC
ELKLLWFKQKLALITRLDDIELSQLAPFELEGARVIVVQPDELTTVLQSISKQRVIGFDT
CHHHHHHHHHHHHHHHCCCCCHHHCCCEEECCCEEEEECCHHHHHHHHHHHHCCEECCCC
ETRASFERGVQHPLSLIQIATHDTCYLFQHALLAEQLGLLKPVLEDENILKVGVGLRSDG
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
QALTREWGINVTPRLDLNWVLAQLGAGKEMGTRQLVATLLQKRIDKPKKVTLSNWQQVPL
HHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCC
TSTQIVYAALDALAAQHCFSELIDKLKPFYLASLEANTQLLTQNLTVRLASYFEQDNEVT
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCC
G
C
>Mature Secondary Structure
MKLMKYCLSPNKLAWLRQELGENADGLIAVMDAAGSAYLVQAAQSDTSVAVDALPKLIGP
CCHHHHHCCCCHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHCC
ELKLLWFKQKLALITRLDDIELSQLAPFELEGARVIVVQPDELTTVLQSISKQRVIGFDT
CHHHHHHHHHHHHHHHCCCCCHHHCCCEEECCCEEEEECCHHHHHHHHHHHHCCEECCCC
ETRASFERGVQHPLSLIQIATHDTCYLFQHALLAEQLGLLKPVLEDENILKVGVGLRSDG
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
QALTREWGINVTPRLDLNWVLAQLGAGKEMGTRQLVATLLQKRIDKPKKVTLSNWQQVPL
HHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCC
TSTQIVYAALDALAAQHCFSELIDKLKPFYLASLEANTQLLTQNLTVRLASYFEQDNEVT
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA