Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597824

Identifier: 120597824

GI number: 120597824

Start: 1135201

End: 1136238

Strand: Direct

Name: 120597824

Synonym: Sputw3181_0994

Alternate gene names: NA

Gene position: 1135201-1136238 (Clockwise)

Preceding gene: 120597823

Following gene: 120597825

Centisome position: 24.11

GC content: 48.07

Gene sequence:

>1038_bases
ATGAATAAACGTATTGTGATTTGTGCCGATGGGACTTGGAATCGGCCCGAGAAAGATCTTAAGGTCGATTTCCCAACCAA
TGTGCTGCGCCTCGCGCGGGCGATTAGCCCCTTGGCCAGTGACGGCAAACCCCAGCAAGTGTTTTATGACTGGGGTGTGG
GTTCCTATTACGATCAAACCATCGGTGGTGCGACAGGGCGCGGTTTACATAAAAACATCATGGATGGTTATCGCTATATA
GTGCAAAACTATTCCCCCGGCGATGAGATTTACCTCTTTGGCTTTAGTCGTGGTGCTTACACAGTGCGTTGCCTGTGTGG
CTTGATTAATAACTGCGGCATACTCAAACGTCCCGATGCGGCGTTGATTCAACAAGCTTTCGACCACTATAAAAAAAGCA
GTGCGCCCTTTGCGCCTGATGGTGAAAAATCCCTCGAGTTTAGAGCGAGATACAGTCATGAATCTCGGGAAATCAAGTTT
GTTGGCGTGTGGGATACCGTGGGTGCTATGGGGATCCCTATCTCGTTTTTAGGCTTGTTCGAAGATAAAGACGAGTTTTA
CGATACTAAAATTGGCCGCAATGTGCGCGTTGCCCGTCATGCCTTAGCCATAGATGAACACCGCAGTGATTTTGAGCCGA
CCATTTGGCAACTACGCGACAATATGGACATGCAGCAAGTGTGGTTTGCGGGTGCCCATAGCAATATTGGCGGCAGTTAT
AAACCTGATAAAGACGGCTCATTGCTGTCGGATATTGCACTGTTGTGGATGATATCCGAGGCGCAGAAATTTAATTTAAG
CCTAGAGCCACATTTAACGGCAAGTTTACATCCTAATCCGCTCGCGACTTTACATGACTCACGGCGCAGTTTTTATCGGA
TAAAGCAGGCGTACTTGCGGCCACTGGATCCTTCGACTGTTCCTGTGTTACTGCACCATTCAGTGAAAATCCGCTGGGAG
CGAGACCCCCAATATCGGCCAAAAAATCTAAAAGTTTACTTGGATCGCTATGGCTGGCCGACTGAGCTAATCAATTAA

Upstream 100 bases:

>100_bases
AAGGATAGCGAGGCTGTTATTCCTTGGTAAAACCCGTTAGCGTCTGTATCGACAGCTTTTTACCTGTGAGATTGGGCATC
TGTGACTCAAGGATGATGCG

Downstream 100 bases:

>100_bases
CCACTTAAGGAATAATATGTATATACAAGGCGTTATTGGGCTGTTTTTCTGTCTATATCTGTTGTGTTCGACTGATGTAC
TGGCGCAGCCCGCTAAACGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MNKRIVICADGTWNRPEKDLKVDFPTNVLRLARAISPLASDGKPQQVFYDWGVGSYYDQTIGGATGRGLHKNIMDGYRYI
VQNYSPGDEIYLFGFSRGAYTVRCLCGLINNCGILKRPDAALIQQAFDHYKKSSAPFAPDGEKSLEFRARYSHESREIKF
VGVWDTVGAMGIPISFLGLFEDKDEFYDTKIGRNVRVARHALAIDEHRSDFEPTIWQLRDNMDMQQVWFAGAHSNIGGSY
KPDKDGSLLSDIALLWMISEAQKFNLSLEPHLTASLHPNPLATLHDSRRSFYRIKQAYLRPLDPSTVPVLLHHSVKIRWE
RDPQYRPKNLKVYLDRYGWPTELIN

Sequences:

>Translated_345_residues
MNKRIVICADGTWNRPEKDLKVDFPTNVLRLARAISPLASDGKPQQVFYDWGVGSYYDQTIGGATGRGLHKNIMDGYRYI
VQNYSPGDEIYLFGFSRGAYTVRCLCGLINNCGILKRPDAALIQQAFDHYKKSSAPFAPDGEKSLEFRARYSHESREIKF
VGVWDTVGAMGIPISFLGLFEDKDEFYDTKIGRNVRVARHALAIDEHRSDFEPTIWQLRDNMDMQQVWFAGAHSNIGGSY
KPDKDGSLLSDIALLWMISEAQKFNLSLEPHLTASLHPNPLATLHDSRRSFYRIKQAYLRPLDPSTVPVLLHHSVKIRWE
RDPQYRPKNLKVYLDRYGWPTELIN
>Mature_345_residues
MNKRIVICADGTWNRPEKDLKVDFPTNVLRLARAISPLASDGKPQQVFYDWGVGSYYDQTIGGATGRGLHKNIMDGYRYI
VQNYSPGDEIYLFGFSRGAYTVRCLCGLINNCGILKRPDAALIQQAFDHYKKSSAPFAPDGEKSLEFRARYSHESREIKF
VGVWDTVGAMGIPISFLGLFEDKDEFYDTKIGRNVRVARHALAIDEHRSDFEPTIWQLRDNMDMQQVWFAGAHSNIGGSY
KPDKDGSLLSDIALLWMISEAQKFNLSLEPHLTASLHPNPLATLHDSRRSFYRIKQAYLRPLDPSTVPVLLHHSVKIRWE
RDPQYRPKNLKVYLDRYGWPTELIN

Specific function: Unknown

COG id: COG3673

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6320812, Length=232, Percent_Identity=27.1551724137931, Blast_Score=82, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39488; Mature: 39488

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKRIVICADGTWNRPEKDLKVDFPTNVLRLARAISPLASDGKPQQVFYDWGVGSYYDQT
CCCEEEEECCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHH
IGGATGRGLHKNIMDGYRYIVQNYSPGDEIYLFGFSRGAYTVRCLCGLINNCGILKRPDA
CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCH
ALIQQAFDHYKKSSAPFAPDGEKSLEFRARYSHESREIKFVGVWDTVGAMGIPISFLGLF
HHHHHHHHHHHHCCCCCCCCCCCCHHHHEECCCCCCEEEEEEEHHCCCCCCCCHHEEEEE
EDKDEFYDTKIGRNVRVARHALAIDEHRSDFEPTIWQLRDNMDMQQVWFAGAHSNIGGSY
CCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHEECCCCCCCCCC
KPDKDGSLLSDIALLWMISEAQKFNLSLEPHLTASLHPNPLATLHDSRRSFYRIKQAYLR
CCCCCCHHHHHHHHHHHHHHHHHCCEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHC
PLDPSTVPVLLHHSVKIRWERDPQYRPKNLKVYLDRYGWPTELIN
CCCCCCCEEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCHHHCC
>Mature Secondary Structure
MNKRIVICADGTWNRPEKDLKVDFPTNVLRLARAISPLASDGKPQQVFYDWGVGSYYDQT
CCCEEEEECCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHH
IGGATGRGLHKNIMDGYRYIVQNYSPGDEIYLFGFSRGAYTVRCLCGLINNCGILKRPDA
CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCH
ALIQQAFDHYKKSSAPFAPDGEKSLEFRARYSHESREIKFVGVWDTVGAMGIPISFLGLF
HHHHHHHHHHHHCCCCCCCCCCCCHHHHEECCCCCCEEEEEEEHHCCCCCCCCHHEEEEE
EDKDEFYDTKIGRNVRVARHALAIDEHRSDFEPTIWQLRDNMDMQQVWFAGAHSNIGGSY
CCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHEECCCCCCCCCC
KPDKDGSLLSDIALLWMISEAQKFNLSLEPHLTASLHPNPLATLHDSRRSFYRIKQAYLR
CCCCCCHHHHHHHHHHHHHHHHHCCEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHC
PLDPSTVPVLLHHSVKIRWERDPQYRPKNLKVYLDRYGWPTELIN
CCCCCCCEEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA