| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is 120597796
Identifier: 120597796
GI number: 120597796
Start: 1099606
End: 1099989
Strand: Direct
Name: 120597796
Synonym: Sputw3181_0966
Alternate gene names: NA
Gene position: 1099606-1099989 (Clockwise)
Preceding gene: 120597793
Following gene: 120597797
Centisome position: 23.35
GC content: 44.79
Gene sequence:
>384_bases ATGACTTTGTTAAAGCACGGAATTTCGATCGGTATTGAGCGTTATGGTGATGATGATTTTTTCGTTGCCTTTAAAGCTAT TGGTACCTTAACTCACCAAGACTACGAAAGGATGGTGCCCGTGTTGGAATCGGCACTGGCAGGCGTAAAAGATCCCGATA TCTTCGCCTTGGTTGATGTCACTGAGTTGGATGGCTTGGAACTACAAGCCGCTTGGGACGATATTAAACTTGGGGTGAAG CATATTCGCCATTTCGAGAAAATTGCCATTGTCGGTAAGACAACATTGCAGGAAGTGTTGGCTAAGTTGGCAAACTGGTT TACGCCTGCTGAGGTAAGGTTTTTTGTCGATAATGGTGATGCGGTAGCTTGGTTACGAGATTAG
Upstream 100 bases:
>100_bases GAGGCAGCGCAAGATATCTGGTGTATTTTTGAGCAAGATCACGGCTTGTTATAGCGTTAGCTTCTACACTGAATCAAAGG TTCTCACATAAGGAGTATGT
Downstream 100 bases:
>100_bases TTCTATTACCTAAGTTTTACCTTCACTTAGTAATTCAGTTGCGCCATAGAAGGAGTACAGATTATGCGTAAAGGTCAAAT ACTCTGGCCCACAGATTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MTLLKHGISIGIERYGDDDFFVAFKAIGTLTHQDYERMVPVLESALAGVKDPDIFALVDVTELDGLELQAAWDDIKLGVK HIRHFEKIAIVGKTTLQEVLAKLANWFTPAEVRFFVDNGDAVAWLRD
Sequences:
>Translated_127_residues MTLLKHGISIGIERYGDDDFFVAFKAIGTLTHQDYERMVPVLESALAGVKDPDIFALVDVTELDGLELQAAWDDIKLGVK HIRHFEKIAIVGKTTLQEVLAKLANWFTPAEVRFFVDNGDAVAWLRD >Mature_126_residues TLLKHGISIGIERYGDDDFFVAFKAIGTLTHQDYERMVPVLESALAGVKDPDIFALVDVTELDGLELQAAWDDIKLGVKH IRHFEKIAIVGKTTLQEVLAKLANWFTPAEVRFFVDNGDAVAWLRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14242; Mature: 14111
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLLKHGISIGIERYGDDDFFVAFKAIGTLTHQDYERMVPVLESALAGVKDPDIFALVDV CCHHHCCHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE TELDGLELQAAWDDIKLGVKHIRHFEKIAIVGKTTLQEVLAKLANWFTPAEVRFFVDNGD CCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC AVAWLRD EEEEECC >Mature Secondary Structure TLLKHGISIGIERYGDDDFFVAFKAIGTLTHQDYERMVPVLESALAGVKDPDIFALVDV CHHHCCHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE TELDGLELQAAWDDIKLGVKHIRHFEKIAIVGKTTLQEVLAKLANWFTPAEVRFFVDNGD CCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC AVAWLRD EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA