| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
Click here to switch to the map view.
The map label for this gene is csgG [H]
Identifier: 120597793
GI number: 120597793
Start: 1096428
End: 1097234
Strand: Direct
Name: csgG [H]
Synonym: Sputw3181_0963
Alternate gene names: 120597793
Gene position: 1096428-1097234 (Clockwise)
Preceding gene: 120597792
Following gene: 120597796
Centisome position: 23.29
GC content: 48.08
Gene sequence:
>807_bases ATGGCTCGTTTAGTGTTAGTGAGTTTATGGTTATTAAGCCTGTCGGCCTGCAGTTTGATCCCTAAACCTGATTTGAATAT CACGGCTGCCGAGGTTAACCCTTTAAGTGAAGTGATGCGTGGATTACAAGCTCAGCCTGGGCCTAAGTTCCCCATTCCTG TCGCTGTATATTCCTTTCGCGATCAAACGGGACAATATAAACCACAGGCTAACGTGAGTTCGTTTTCGACCGCGGTTACT CAGGGCGCAACGTCGATGTTGATGCAGACTTTGCTCGACTCTAAATGGTTTACACCTGTGGAGCGTGAAGGGCTGCAAAA TTTGCTTACCGAGCGCAAGATCAGCAATAAACAAACGGGAACTAAGGGTGATGACGTACCTGTATTGTCTACTGCCAGAT TGTTGCTTGAAGGTGGGATCATCAGCTATGAGACTAACACCAGTACGGGAGGTGCGGGCGTTGAGTATTACGGCATTGGT GCCTCTGAAATGTACCGTGAAGATCTGGTGACGATTTATCTGCGTGCGGTCGATGTGCACACGGGTAAAGTGATGATGTC AGTCTCAACCAGTAAGCGTGTTTTATCCCAAGAAATGCGTGCGGGGTTATTCCGTTACACGAGTTTAAATCGCCTTGCCG AGGCAGAAGTCGGTTTTACTACCAATGAACCAGTGCAATTTTGTGTGTTGCAGGCCATTGAATTGGCGGTCGCTGAGATG ATTGATAAGGGCATCAAACAAGGTTACTGGAGCCCAACTCAAGTCACCCAGCCAGCCGAAAAAGCGCAGGAGTTGAGTCA GAGTTAA
Upstream 100 bases:
>100_bases AGGTGGCTTCTACGGGTAATGGCGTGATGTTAACTATCACTAACACTCAAACTGGTGAAATTACAGTGATAGAAATGCCG ACGTTTGGAGGTCTTAGCTA
Downstream 100 bases:
>100_bases GTACGTGCGCCGAAATTAGGATAAGCGCTGGAGTTTAGCTGTAGACCCCAGCGTTTACCTAAGGCAGCAATTGAGAGTCA ATAGCCTGATATTGGGCTAT
Product: curli production assembly/transport component CsgG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MARLVLVSLWLLSLSACSLIPKPDLNITAAEVNPLSEVMRGLQAQPGPKFPIPVAVYSFRDQTGQYKPQANVSSFSTAVT QGATSMLMQTLLDSKWFTPVEREGLQNLLTERKISNKQTGTKGDDVPVLSTARLLLEGGIISYETNTSTGGAGVEYYGIG ASEMYREDLVTIYLRAVDVHTGKVMMSVSTSKRVLSQEMRAGLFRYTSLNRLAEAEVGFTTNEPVQFCVLQAIELAVAEM IDKGIKQGYWSPTQVTQPAEKAQELSQS
Sequences:
>Translated_268_residues MARLVLVSLWLLSLSACSLIPKPDLNITAAEVNPLSEVMRGLQAQPGPKFPIPVAVYSFRDQTGQYKPQANVSSFSTAVT QGATSMLMQTLLDSKWFTPVEREGLQNLLTERKISNKQTGTKGDDVPVLSTARLLLEGGIISYETNTSTGGAGVEYYGIG ASEMYREDLVTIYLRAVDVHTGKVMMSVSTSKRVLSQEMRAGLFRYTSLNRLAEAEVGFTTNEPVQFCVLQAIELAVAEM IDKGIKQGYWSPTQVTQPAEKAQELSQS >Mature_267_residues ARLVLVSLWLLSLSACSLIPKPDLNITAAEVNPLSEVMRGLQAQPGPKFPIPVAVYSFRDQTGQYKPQANVSSFSTAVTQ GATSMLMQTLLDSKWFTPVEREGLQNLLTERKISNKQTGTKGDDVPVLSTARLLLEGGIISYETNTSTGGAGVEYYGIGA SEMYREDLVTIYLRAVDVHTGKVMMSVSTSKRVLSQEMRAGLFRYTSLNRLAEAEVGFTTNEPVQFCVLQAIELAVAEMI DKGIKQGYWSPTQVTQPAEKAQELSQS
Specific function: May be involved in the biogenesis of curli organelles [H]
COG id: COG1462
COG function: function code M; Uncharacterized protein involved in formation of curli polymers
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CsgG family [H]
Homologues:
Organism=Escherichia coli, GI1787274, Length=257, Percent_Identity=43.9688715953307, Blast_Score=211, Evalue=5e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005534 [H]
Pfam domain/function: PF03783 CsgG [H]
EC number: NA
Molecular weight: Translated: 29308; Mature: 29177
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLVLVSLWLLSLSACSLIPKPDLNITAAEVNPLSEVMRGLQAQPGPKFPIPVAVYSFR CHHHHHHHHHHHHHHHHHCCCCCCCCEEHHCCCHHHHHHHHHCCCCCCCCCCCEEEEEHH DQTGQYKPQANVSSFSTAVTQGATSMLMQTLLDSKWFTPVEREGLQNLLTERKISNKQTG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC TKGDDVPVLSTARLLLEGGIISYETNTSTGGAGVEYYGIGASEMYREDLVTIYLRAVDVH CCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHEEC TGKVMMSVSTSKRVLSQEMRAGLFRYTSLNRLAEAEVGFTTNEPVQFCVLQAIELAVAEM CCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH IDKGIKQGYWSPTQVTQPAEKAQELSQS HHHHHHHCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure ARLVLVSLWLLSLSACSLIPKPDLNITAAEVNPLSEVMRGLQAQPGPKFPIPVAVYSFR HHHHHHHHHHHHHHHHHCCCCCCCCEEHHCCCHHHHHHHHHCCCCCCCCCCCEEEEEHH DQTGQYKPQANVSSFSTAVTQGATSMLMQTLLDSKWFTPVEREGLQNLLTERKISNKQTG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC TKGDDVPVLSTARLLLEGGIISYETNTSTGGAGVEYYGIGASEMYREDLVTIYLRAVDVH CCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHEEC TGKVMMSVSTSKRVLSQEMRAGLFRYTSLNRLAEAEVGFTTNEPVQFCVLQAIELAVAEM CCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH IDKGIKQGYWSPTQVTQPAEKAQELSQS HHHHHHHCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA