Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597792

Identifier: 120597792

GI number: 120597792

Start: 1096033

End: 1096428

Strand: Direct

Name: 120597792

Synonym: Sputw3181_0962

Alternate gene names: NA

Gene position: 1096033-1096428 (Clockwise)

Preceding gene: 120597791

Following gene: 120597793

Centisome position: 23.28

GC content: 43.94

Gene sequence:

>396_bases
ATGACATACAGGACGTTACTTGCCCTTGTCACGTTATATGTGGCGAGCAGTGGTCAAGCCACTGAATTGATTTACACCCC
CATTAATCCCAGTTTTGGCGGTAATCCACAAAATGGGACTTTTCTATTAAATAAAGCCCAAGCCCAGAATGACAATAAAT
CTAGCTCGACCGAGAAGGACTTTGTCACCCGCTTTAAAGAATCCCTAGAGCGTAACATTATTAACTCCATCACCCGCGGT
GTGGCCGATGGTGAGATCAAAGATGGCGTTTATGATACTGGGGATTTTCGTATTGAGGTGGCTTCTACGGGTAATGGCGT
GATGTTAACTATCACTAACACTCAAACTGGTGAAATTACAGTGATAGAAATGCCGACGTTTGGAGGTCTTAGCTAA

Upstream 100 bases:

>100_bases
CAGGCGATTTTGCTCACGATTGATTATTTAGCGCAAATCAGAGCCAATGCCATAACAGGTGATTTTTCAGGAACATCGGA
CGATTTTTAGGATAAAAATA

Downstream 100 bases:

>100_bases
TGGCTCGTTTAGTGTTAGTGAGTTTATGGTTATTAAGCCTGTCGGCCTGCAGTTTGATCCCTAAACCTGATTTGAATATC
ACGGCTGCCGAGGTTAACCC

Product: curli production assembly/transport component CsgF

Products: NA

Alternate protein names: Curli Production Assembly/Transport Component; Curli Fiber Protein CsgF; Assembly/Transport Component In Curli Production CsgF

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MTYRTLLALVTLYVASSGQATELIYTPINPSFGGNPQNGTFLLNKAQAQNDNKSSSTEKDFVTRFKESLERNIINSITRG
VADGEIKDGVYDTGDFRIEVASTGNGVMLTITNTQTGEITVIEMPTFGGLS

Sequences:

>Translated_131_residues
MTYRTLLALVTLYVASSGQATELIYTPINPSFGGNPQNGTFLLNKAQAQNDNKSSSTEKDFVTRFKESLERNIINSITRG
VADGEIKDGVYDTGDFRIEVASTGNGVMLTITNTQTGEITVIEMPTFGGLS
>Mature_130_residues
TYRTLLALVTLYVASSGQATELIYTPINPSFGGNPQNGTFLLNKAQAQNDNKSSSTEKDFVTRFKESLERNIINSITRGV
ADGEIKDGVYDTGDFRIEVASTGNGVMLTITNTQTGEITVIEMPTFGGLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14148; Mature: 14017

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYRTLLALVTLYVASSGQATELIYTPINPSFGGNPQNGTFLLNKAQAQNDNKSSSTEKD
CCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHH
FVTRFKESLERNIINSITRGVADGEIKDGVYDTGDFRIEVASTGNGVMLTITNTQTGEIT
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCEE
VIEMPTFGGLS
EEEECCCCCCC
>Mature Secondary Structure 
TYRTLLALVTLYVASSGQATELIYTPINPSFGGNPQNGTFLLNKAQAQNDNKSSSTEKD
CHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHH
FVTRFKESLERNIINSITRGVADGEIKDGVYDTGDFRIEVASTGNGVMLTITNTQTGEIT
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCEE
VIEMPTFGGLS
EEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA