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The map label for this gene is ybjZ [C]

Identifier: 120597787

GI number: 120597787

Start: 1089486

End: 1090796

Strand: Direct

Name: ybjZ [C]

Synonym: Sputw3181_0957

Alternate gene names: 120597787

Gene position: 1089486-1090796 (Clockwise)

Preceding gene: 120597786

Following gene: 120597788

Centisome position: 23.14

GC content: 45.08

Gene sequence:

>1311_bases
ATGTTTTTTTATTATGTTGATTTAGCGTGGCGCAGCATTAAGAAAACCCCAGTGTTGTCAATGTTGATGGTGTTGGCGAT
TTCCATTGGTATCGGTATCACTATCACTACCTTAAACGTGTATAAGATGATGTCGTTTAACCCTGCGGGTGAACGTTCTG
ACGAGTTAAATGCGGTACAGCTTTGGAGCCAAGGTCCCGATTCTTGGGATGAGTTAAACTCATTAGTGACTTACCAAGAC
GCGATGAATCTGCGCAACAATACCTTACCTAAACGCCAAGCTGCGATGTTTCGCACTGGGATGGCAGTGCAAACGGACGA
TGTTAATTTTGCGCCTATTTTAGAAAGCATTCGGGTGACGGACAGTGACTTTTTTAAGCTGTTTGACGTGCCATTTTTAT
ACGGTAATGCGTGGGATAAATCGGTGGACACTGAGCCTGCTTATCAAGTGGTGATTAACGATAAACTCAATCAAAAGTTG
TTTGCGGGTCAAAACAGTGTTGGCAAAGTGGTTTATCTTAATCGTAAACCTTATCAAGTGGTTGGAGTAATTAAATCCTG
GGATCCTAAGCCTAAATATTATGATCCCACTAACGGCGCCTTTAACGACACGGAACAAATTTTTGTGCCGTTTTCGCTGA
CGCCTATCGAAGAGTTTGATATATGGGGTAACACTTCGGGTTGGAAGTTTGAGCCGATGAATAGCTACAGCGATCGCCTT
CACTCTGAAAAAGTGTGGTTGCTCTATTGGGTTGAGTTGCCCAATAAAGACGCAGTAGCCAGTTACCGTTCTTGGCTCAG
CAATTATGTGGCGGAACAAAAAGCCCTAGGCCGTTTTACGGATAATAAATCTGCCGCTGATTCAGTCAAAGTATCCGATG
TGGCAACTTGGCTTGAATACAATCATGTGGTGCCAGAAGACAATAAAATCTTGGTCGGTTTGAGTGTTCTGTTTTTAAGT
GTTTGTTTAGTCAATATATTAGGTTTGATGCTGACCAAGTTTCTCAAGCGCGCGCCCGAAGTGGGTGTACGCCGCGCCAT
TGGCGCTAGCCGAGGTCAAATCTTCGCTCAATATATGGTTGAAGTGGGCATGATTGGTTTATTCGGTGGTTTGCTGGGAC
TGGCTTGGGCCTATGCTTCGCTTTATGGGTTATCGGCCCAGTTTGAGGTCGCGAAGGGGTTAACCCAGTTATCGGCAAGT
ATGTGGATTATCACCCCAAGTATTGCGGTGGGCACAGCGTTATTGGCTGGTTTGTATCCTGCGTGGGTGGTGTGTCGCAC
TAAGCCTAGCGTTTATCTTAAAAGCCAGTAG

Upstream 100 bases:

>100_bases
TGTGTGATTTTACGATGTATCAGCCCCGTGGCAGCGCACAAATTGCGACGACAGATCCACTAGACAAACTTGTCGCTAAC
GCAGACTAAGGATACGCATT

Downstream 100 bases:

>100_bases
GGGACTTATTATGTTGCATATTAAACCTATTCTCAGCAGTTTATTGCGCAGTAAAAGCGGTCCAATCTTACTGCTTATTC
AAATTATTTTGTCAGTGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: ABC Transporter Permease; ABC Transporter Permease Protein; ABC-Type Transport System ATPase And Permease

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MFFYYVDLAWRSIKKTPVLSMLMVLAISIGIGITITTLNVYKMMSFNPAGERSDELNAVQLWSQGPDSWDELNSLVTYQD
AMNLRNNTLPKRQAAMFRTGMAVQTDDVNFAPILESIRVTDSDFFKLFDVPFLYGNAWDKSVDTEPAYQVVINDKLNQKL
FAGQNSVGKVVYLNRKPYQVVGVIKSWDPKPKYYDPTNGAFNDTEQIFVPFSLTPIEEFDIWGNTSGWKFEPMNSYSDRL
HSEKVWLLYWVELPNKDAVASYRSWLSNYVAEQKALGRFTDNKSAADSVKVSDVATWLEYNHVVPEDNKILVGLSVLFLS
VCLVNILGLMLTKFLKRAPEVGVRRAIGASRGQIFAQYMVEVGMIGLFGGLLGLAWAYASLYGLSAQFEVAKGLTQLSAS
MWIITPSIAVGTALLAGLYPAWVVCRTKPSVYLKSQ

Sequences:

>Translated_436_residues
MFFYYVDLAWRSIKKTPVLSMLMVLAISIGIGITITTLNVYKMMSFNPAGERSDELNAVQLWSQGPDSWDELNSLVTYQD
AMNLRNNTLPKRQAAMFRTGMAVQTDDVNFAPILESIRVTDSDFFKLFDVPFLYGNAWDKSVDTEPAYQVVINDKLNQKL
FAGQNSVGKVVYLNRKPYQVVGVIKSWDPKPKYYDPTNGAFNDTEQIFVPFSLTPIEEFDIWGNTSGWKFEPMNSYSDRL
HSEKVWLLYWVELPNKDAVASYRSWLSNYVAEQKALGRFTDNKSAADSVKVSDVATWLEYNHVVPEDNKILVGLSVLFLS
VCLVNILGLMLTKFLKRAPEVGVRRAIGASRGQIFAQYMVEVGMIGLFGGLLGLAWAYASLYGLSAQFEVAKGLTQLSAS
MWIITPSIAVGTALLAGLYPAWVVCRTKPSVYLKSQ
>Mature_436_residues
MFFYYVDLAWRSIKKTPVLSMLMVLAISIGIGITITTLNVYKMMSFNPAGERSDELNAVQLWSQGPDSWDELNSLVTYQD
AMNLRNNTLPKRQAAMFRTGMAVQTDDVNFAPILESIRVTDSDFFKLFDVPFLYGNAWDKSVDTEPAYQVVINDKLNQKL
FAGQNSVGKVVYLNRKPYQVVGVIKSWDPKPKYYDPTNGAFNDTEQIFVPFSLTPIEEFDIWGNTSGWKFEPMNSYSDRL
HSEKVWLLYWVELPNKDAVASYRSWLSNYVAEQKALGRFTDNKSAADSVKVSDVATWLEYNHVVPEDNKILVGLSVLFLS
VCLVNILGLMLTKFLKRAPEVGVRRAIGASRGQIFAQYMVEVGMIGLFGGLLGLAWAYASLYGLSAQFEVAKGLTQLSAS
MWIITPSIAVGTALLAGLYPAWVVCRTKPSVYLKSQ

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48958; Mature: 48958

Theoretical pI: Translated: 7.39; Mature: 7.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFYYVDLAWRSIKKTPVLSMLMVLAISIGIGITITTLNVYKMMSFNPAGERSDELNAVQ
CEEEEEEHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCCCCCCCCCCCCEE
LWSQGPDSWDELNSLVTYQDAMNLRNNTLPKRQAAMFRTGMAVQTDDVNFAPILESIRVT
EECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHCCC
DSDFFKLFDVPFLYGNAWDKSVDTEPAYQVVINDKLNQKLFAGQNSVGKVVYLNRKPYQV
CCHHHHHHCCCEEECCCCCCCCCCCCCEEEEECCCCCHHHHCCCCCCCEEEEECCCCEEE
VGVIKSWDPKPKYYDPTNGAFNDTEQIFVPFSLTPIEEFDIWGNTSGWKFEPMNSYSDRL
EEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHCCCCCCCCCCEECCCCHHHHHH
HSEKVWLLYWVELPNKDAVASYRSWLSNYVAEQKALGRFTDNKSAADSVKVSDVATWLEY
CCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHH
NHVVPEDNKILVGLSVLFLSVCLVNILGLMLTKFLKRAPEVGVRRAIGASRGQIFAQYMV
CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHH
EVGMIGLFGGLLGLAWAYASLYGLSAQFEVAKGLTQLSASMWIITPSIAVGTALLAGLYP
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHCC
AWVVCRTKPSVYLKSQ
CEEEEECCCCEEEECC
>Mature Secondary Structure
MFFYYVDLAWRSIKKTPVLSMLMVLAISIGIGITITTLNVYKMMSFNPAGERSDELNAVQ
CEEEEEEHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCCCCCCCCCCCCEE
LWSQGPDSWDELNSLVTYQDAMNLRNNTLPKRQAAMFRTGMAVQTDDVNFAPILESIRVT
EECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHCCC
DSDFFKLFDVPFLYGNAWDKSVDTEPAYQVVINDKLNQKLFAGQNSVGKVVYLNRKPYQV
CCHHHHHHCCCEEECCCCCCCCCCCCCEEEEECCCCCHHHHCCCCCCCEEEEECCCCEEE
VGVIKSWDPKPKYYDPTNGAFNDTEQIFVPFSLTPIEEFDIWGNTSGWKFEPMNSYSDRL
EEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHCCCCCCCCCCEECCCCHHHHHH
HSEKVWLLYWVELPNKDAVASYRSWLSNYVAEQKALGRFTDNKSAADSVKVSDVATWLEY
CCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHH
NHVVPEDNKILVGLSVLFLSVCLVNILGLMLTKFLKRAPEVGVRRAIGASRGQIFAQYMV
CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHH
EVGMIGLFGGLLGLAWAYASLYGLSAQFEVAKGLTQLSASMWIITPSIAVGTALLAGLYP
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHCC
AWVVCRTKPSVYLKSQ
CEEEEECCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA