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The map label for this gene is emrA [C]

Identifier: 120597784

GI number: 120597784

Start: 1086979

End: 1088286

Strand: Direct

Name: emrA [C]

Synonym: Sputw3181_0954

Alternate gene names: 120597784

Gene position: 1086979-1088286 (Clockwise)

Preceding gene: 120597777

Following gene: 120597785

Centisome position: 23.09

GC content: 47.94

Gene sequence:

>1308_bases
ATGCGTTCCGGCACTGATGATTCCAACAGGGAAGCGAGTAAAGCCATGATTAAAGATACTAGCGGCCAAGATACAGTACT
TGTGCCATCCACCACTAAACGTCTTAAATTACCTCTGTTAATTAGCGGCTGCGCCTTATTAGTTAGCGCCTTAGTGTGGG
CAAGTTTAGGCTCTGATAGTGTTAGCAAATCCTTAAGCCGTAGCGATATCACCACGGCAACACTTTATGTGGGAACCTTA
ACCCGCGATGTGGCGACCACAGGTAAAATTGTGGCGGCCAATGCGCCGATTTTGTATAGCACCGAAGAAGGTACAGTGAC
CCTACTGAGTAATCCTGGCGATACAGTCAATAAGGGCGATGTGGTTGCCAAACTCGATAGTCCAAGACTCACTAATCAGC
TAGAGCAAGCCAAATCCGTATTAGCGGGCATGGAAAGTGCGTTAGAGCGCGCTAAGTTAGATGCGAGACGCGATCAATTA
CAAGCTTATCAAACCTTAGATATGGCTACGGTCGATCTTGAGGCGGCCGAGCGAGAAAGTCGTCGAGGTGAGCTGCTGAT
TCAAAGCCAACTTATTGGCCAGATTGATTATGAAAAGGGCAAAGATGATTTACACAAAGCCAAGCTGAAGTTTAAACATG
CCGAGCAAGAAGTCGCGTTAACGAAAGATACCTTAACTTTTGAGGTAAAAAATAAAGCCCTCGAAGTTGAACGTCAAACC
CTCGCGGTGCGTGAACTAGAACGCCAAGTCGAAGCCTTGAATATTGTCGCACCCGTTAATGGGATTATCGGCAACTGGAT
CACCGAGCAGAAAACCCGTCTTAGTGCCAACCAACCGATTTTAACCGTCGTGGATTTAAGCGCCTATGAAGCTGAGTTGG
CCGTGCCAGAAAGCTATGCCGACGATTTAGGTTTAGGTATGGAAGTCGAGTTGAGTTTTGGCAGTATTAAGTTAATGGGC
AAGTTATCGTCGATTTCCCCTGAAGTGCGTAACCGTGAAGTGACCGCAAGGGTGCAATTTGATCAAAATGACAGCCTGAA
ACTGCGTCAGAATCAACGTATCTCGGCCCGAGTGTTATTAGAGCACAGACCCAATGTACTGATGGTAAAACGCGGCGCCT
TTATGACCAGCGGTGGCGGGGAGGAAACTTATCAAGTCGAAGGCGATTTAGCGACCCGCCGTGCGATAAAACTGGGTAGT
ACGAGCCTGAGCCAAGTGGAAGTTCTGGATGGCGGTAAAGCGGGAGATGAGTGGGTGATCTCAAGCCTCGATCCCTTTAA
TCGTGCTGAGCAGGTAAGAATGAACTGA

Upstream 100 bases:

>100_bases
TATCTGCGATTTTTTATTAAGATTATGAAAGTAAATGATTTTACTTGTTTGGCATAGGCTTTGCTAACTCTAGGGTAGAG
ATTTCCAATAGTGTCCGTTG

Downstream 100 bases:

>100_bases
ATCATGCGAAACAAGGCATCCCTAATCAGTTGAGTCCCTTAGGTGAGCAATAAAAGTACAGCGCCATGCATTAAATAGGA
GCCAGATATGCGACATAACC

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: Efflux Transporter RND Family MFP Subunit; ABC Transporter Permease; HlyD Family Secretion Protein; Efflux Transporter MFP Component RND Family; Secretion Protein HlyD; Efflux Transporter Rnd Family Mfp Subunit; ABC Transporter Component Protein; Efflux Transporter MFP Subunit; Efflux Transporter MFP Component RND Family Protein; Membrane-Fusion Protein; Membrane Fusion Protein; ABC Transporter Permease Protein; Efflux Transporter; PAS/PAC Sensor Protein; HlyD Family Transporter Protein; HlyD Family Transporter

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MRSGTDDSNREASKAMIKDTSGQDTVLVPSTTKRLKLPLLISGCALLVSALVWASLGSDSVSKSLSRSDITTATLYVGTL
TRDVATTGKIVAANAPILYSTEEGTVTLLSNPGDTVNKGDVVAKLDSPRLTNQLEQAKSVLAGMESALERAKLDARRDQL
QAYQTLDMATVDLEAAERESRRGELLIQSQLIGQIDYEKGKDDLHKAKLKFKHAEQEVALTKDTLTFEVKNKALEVERQT
LAVRELERQVEALNIVAPVNGIIGNWITEQKTRLSANQPILTVVDLSAYEAELAVPESYADDLGLGMEVELSFGSIKLMG
KLSSISPEVRNREVTARVQFDQNDSLKLRQNQRISARVLLEHRPNVLMVKRGAFMTSGGGEETYQVEGDLATRRAIKLGS
TSLSQVEVLDGGKAGDEWVISSLDPFNRAEQVRMN

Sequences:

>Translated_435_residues
MRSGTDDSNREASKAMIKDTSGQDTVLVPSTTKRLKLPLLISGCALLVSALVWASLGSDSVSKSLSRSDITTATLYVGTL
TRDVATTGKIVAANAPILYSTEEGTVTLLSNPGDTVNKGDVVAKLDSPRLTNQLEQAKSVLAGMESALERAKLDARRDQL
QAYQTLDMATVDLEAAERESRRGELLIQSQLIGQIDYEKGKDDLHKAKLKFKHAEQEVALTKDTLTFEVKNKALEVERQT
LAVRELERQVEALNIVAPVNGIIGNWITEQKTRLSANQPILTVVDLSAYEAELAVPESYADDLGLGMEVELSFGSIKLMG
KLSSISPEVRNREVTARVQFDQNDSLKLRQNQRISARVLLEHRPNVLMVKRGAFMTSGGGEETYQVEGDLATRRAIKLGS
TSLSQVEVLDGGKAGDEWVISSLDPFNRAEQVRMN
>Mature_435_residues
MRSGTDDSNREASKAMIKDTSGQDTVLVPSTTKRLKLPLLISGCALLVSALVWASLGSDSVSKSLSRSDITTATLYVGTL
TRDVATTGKIVAANAPILYSTEEGTVTLLSNPGDTVNKGDVVAKLDSPRLTNQLEQAKSVLAGMESALERAKLDARRDQL
QAYQTLDMATVDLEAAERESRRGELLIQSQLIGQIDYEKGKDDLHKAKLKFKHAEQEVALTKDTLTFEVKNKALEVERQT
LAVRELERQVEALNIVAPVNGIIGNWITEQKTRLSANQPILTVVDLSAYEAELAVPESYADDLGLGMEVELSFGSIKLMG
KLSSISPEVRNREVTARVQFDQNDSLKLRQNQRISARVLLEHRPNVLMVKRGAFMTSGGGEETYQVEGDLATRRAIKLGS
TSLSQVEVLDGGKAGDEWVISSLDPFNRAEQVRMN

Specific function: The Emr Locus Confers Resistance To Substances Of High Hydrophobicity. Emra Probably Participate In A Transport System To Extrude Toxins And Drugs From The Cell. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47528; Mature: 47528

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSGTDDSNREASKAMIKDTSGQDTVLVPSTTKRLKLPLLISGCALLVSALVWASLGSDS
CCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCEECHHHHHHHHHHHHHHHHHHCCCHH
VSKSLSRSDITTATLYVGTLTRDVATTGKIVAANAPILYSTEEGTVTLLSNPGDTVNKGD
HHHHHHHCCCEEEEEEEEHHHHHHHCCCEEEEECCCEEEECCCCEEEEECCCCCCCCCCC
VVAKLDSPRLTNQLEQAKSVLAGMESALERAKLDARRDQLQAYQTLDMATVDLEAAERES
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEHHHHHHHC
RRGELLIQSQLIGQIDYEKGKDDLHKAKLKFKHAEQEVALTKDTLTFEVKNKALEVERQT
CCCCEEEEEHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECEEEEEECCCHHHHHHHH
LAVRELERQVEALNIVAPVNGIIGNWITEQKTRLSANQPILTVVDLSAYEAELAVPESYA
HHHHHHHHHHHHHEEEECCCHHHCCCHHHHHHHCCCCCCEEEEEECCHHCCEECCCCHHH
DDLGLGMEVELSFGSIKLMGKLSSISPEVRNREVTARVQFDQNDSLKLRQNQRISARVLL
HHCCCCEEEEEECCCEEEEEEHHHCCCCCCCCEEEEEEEECCCCCEEECCCCCCEEEEEE
EHRPNVLMVKRGAFMTSGGGEETYQVEGDLATRRAIKLGSTSLSQVEVLDGGKAGDEWVI
ECCCCEEEEECCCEEECCCCCCEEEECCCHHHHHEEECCCCCCCEEEEECCCCCCCCCEE
SSLDPFNRAEQVRMN
CCCCCCCCCHHCCCC
>Mature Secondary Structure
MRSGTDDSNREASKAMIKDTSGQDTVLVPSTTKRLKLPLLISGCALLVSALVWASLGSDS
CCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCEECHHHHHHHHHHHHHHHHHHCCCHH
VSKSLSRSDITTATLYVGTLTRDVATTGKIVAANAPILYSTEEGTVTLLSNPGDTVNKGD
HHHHHHHCCCEEEEEEEEHHHHHHHCCCEEEEECCCEEEECCCCEEEEECCCCCCCCCCC
VVAKLDSPRLTNQLEQAKSVLAGMESALERAKLDARRDQLQAYQTLDMATVDLEAAERES
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEHHHHHHHC
RRGELLIQSQLIGQIDYEKGKDDLHKAKLKFKHAEQEVALTKDTLTFEVKNKALEVERQT
CCCCEEEEEHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECEEEEEECCCHHHHHHHH
LAVRELERQVEALNIVAPVNGIIGNWITEQKTRLSANQPILTVVDLSAYEAELAVPESYA
HHHHHHHHHHHHHEEEECCCHHHCCCHHHHHHHCCCCCCEEEEEECCHHCCEECCCCHHH
DDLGLGMEVELSFGSIKLMGKLSSISPEVRNREVTARVQFDQNDSLKLRQNQRISARVLL
HHCCCCEEEEEECCCEEEEEEHHHCCCCCCCCEEEEEEEECCCCCEEECCCCCCEEEEEE
EHRPNVLMVKRGAFMTSGGGEETYQVEGDLATRRAIKLGSTSLSQVEVLDGGKAGDEWVI
ECCCCEEEEECCCEEECCCCCCEEEECCCHHHHHEEECCCCCCCEEEEECCCCCCCCCEE
SSLDPFNRAEQVRMN
CCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA