| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is glnE [H]
Identifier: 120597688
GI number: 120597688
Start: 966743
End: 969607
Strand: Direct
Name: glnE [H]
Synonym: Sputw3181_0858
Alternate gene names: 120597688
Gene position: 966743-969607 (Clockwise)
Preceding gene: 120597679
Following gene: 120597689
Centisome position: 20.53
GC content: 45.17
Gene sequence:
>2865_bases ATGACCATGCAAAAAGACAGTAAGAAGTCATTGTCTACACTCATCACACAAACCGCAGAGCGCCATTGGCAGCGGCTAGA GGATGTATGGTCCGATGGGCTGTCACATTTGACACCAACAGCTAAACAAGAATTAAAAACGGTACTGGGGTTAAGTGATT ATGTGGCCGCGCAGTTAAGTAGACATCCCGAATGGATTAATCGACTATTCATGGGAGACTTAACGGATGTTAATCGTAAA CATTATGATGTTGAATTACATGAGTTGCTAAGTAATGCGACTAGCGAGGATATGGCTAAATCCGTATTACGTCGTTTTCG TAATTATCAAATGGTACGCTTAGCTTGGCGTGATTTTTTAGATTACACCAGTTTAGAAACCTCCCTTCTCGATTTATCTG CACTGGCTGAAGCGTTAGTGATCTGTGCCCGCGATTGGCTTTACAAAGAGATGTGCGCGCAATATGGCACACCAATGGAT AAAGCTGGTAATCCGCAACCGCTGCTGATTTTAGGTATGGGGAAACTCGGTGGTCGTGAGCTTAACTTTTCCTCGGATAT CGATCTGATTTTCACTTTTCCCGAGCATGGCGAAACCCTTGGTGGCCGTCGGAGTTTAGATAACCAACAATTTTTTATTC GTATGGGGCAAAGGCTTGTCAATCTACTCGATCAAATAACGGTCGATGGTTTTGTTTTCAGAGTCGATATGCGTTTGCGT CCTTATGGTGAGAGTGGTCCACTGGTGGTGAGTTTTAGTGCACTTGAGGATTATTACCAAGAGCAGGGGCGTGATTGGGA ACGCTATGCCATGGTTAAAGCCCGCGCACTTGGTCCGTGGAATCATTTTTCCGATGAACTACACAGTTTACTTCGCCCCT TTGTGTACCGCCGTTATATTGATTTTTCGGCTATCGACTCCCTACGAAAAATGAAGCAGCTTATCGCTCAAGAGGTACGT CGTCGTCAGCTAACTGACAATATCAAACTCGGTGCTGGCGGTATTCGAGAAGTGGAATTCGTGGTGCAAAGTTTTCAACT TATTCGCGGTGGAAGAGAGCCAGCACTTCGCCAACAGAGTTTATTTGGCGCTATGGACACGCTTTATAGTCTTGGGCAGT TTGAATACCTGGCGGTGGACGAATTAAAACACAGTTACTTGCTGCTGCGCCGAGTCGAAAATCTACTACAAGCGATTGAT GATAAACAGACTCAAACCTTACCGAATAATCCCCTCGATTGGGCAAGATTATGTCATGTACTCGATATGGCAAATGAGGT TGAGTTACGCAGTCATATTGAAGCGGCAATGGCGAAAATACACCGTCATTTTAAAGCGACCGTTGGGGGTGAAGAAGGGG AAGAAAAAACAGAGCATTGGACTGTGCAATTGTGGAATGTACAGCAGGATGATCATGCACTTGCATTGTTTGCCGAGCAA CAGATCGAAGATGACAAGCTATGGCCTATGCTTAGCTGTTGGCGTGAAACGGTGATAAAGCGATCTATTGGACCTCGAGG CCGGGAAACTTTAGATAAATTAATGCCAAGATTATTGGAGGAGCTTCTCAATCAACACAGTCCGTCGGCGGCCTTCGAAC CCGTTTCTAAGGTACTTGAACAGATTTTAACGCGCACCACTTACCTCGAGCTTTTATGCGAAAACCCTGGTGCGCGTCAA CAATTAGTGAGCTTGTGTTGTGCAAGTCCTTGGATTGCGACTCAGTTAGCTAAATTTCCTATGTTATTGGATGAGCTTAT CGATCCCGCGCATTTGTACGACACCACTTCATTGGACGATTATCCCAGCGAGTTGCGCCAATATCTGCTTAGGGTGCCGG AAGATGATATGGAGCAGCAAATGGAGGCGCTGCGACAATTTAAACTTTCACAACAACTTAAGATTGCCGCAGCCGATGTC ACAGGCGTATTACCTGTGATGCAAGTCAGTGATCATTTAACCTTTTTAGCTGAAGCTATTATTGAGCAGGTTGTGATGCA AGCATGGCAACAGGTGGCGCAACGTCATGGTGTGCCTGGGTATCTTGAGAGTAGTGATACTGGTTTTGCCGTTATTGGTT ACGGTAAGTTAGGCGGTATTGAACTTGGGTATGGATCGGATCTGGATTTGGTATTCCTATACGAAGCCCATAAAAATATG GAAAACAGCCTAACTAATGGCGATAGACCGATAGAAGTAGGACATTTTTACCTTAAACTTGCCCAACGCATTTTGCATTT ATTCTCCACTCGCACCACATCAGGAGAATTGTATGAGGTCGATATGCGTCTGCGCCCCTCTGGCGCCTCGGGGTTGATGG TCAGTGAGATTGAACGCTTCGGGGAATATCAAGCTAATGAGGCTTGGACTTGGGAGCATCAAGCCTTAGTTCGCTCACGT TTTGTTTTTGGTGACAATAGTTTAGCGGTTAAGTTTAGTCATATCCGAGCCTCAGTGTTAGAACAGTCGAGGGATAAAGC GGAGCTTAAAAAAGCCGTGCGTGAGATGCGCCAGAAGATGCGTGATCATTTGTTAAAAGTGACTGAAGGCCAATTCGATT TAAAACAAAGCATTGGTGGAATCGCCGATATTGAATTTATTGCTCAGTATCTTGTGCTTGCTAATGCCCATGAGTATCCA GAACTATCGATTTGGTCTGATAATGTGCGAATTTTTGCTGTGTTAGCCGAACTTGCGCTTTTACCTATTATGAGTGCGCA ACATTTAACTCAATCCTATTGTTGGCTAAGGGATGAGAATCACCGACTTACACTACAGCAAAAGTCGGGGCAGTTGCCTT ACATTGAGGTTGCAGAACATGCCGAGCGGGTACTGAACATCTATCGAGCCGTGCTTGAATCGTAA
Upstream 100 bases:
>100_bases ATTTGTGTGTTACATCAGGTAGCTGCAAGTCTCGTTGAACATGTCAATCTATATCATTTACGACATAATATGTCGATAGT TTAATTTGTTAGGGATTATT
Downstream 100 bases:
>100_bases ACTTTTGTCTATTCAAATTCTCTAGGTCGGGGGATTTGGTCTAAAGTTTAATGCAGAGCAGCTATTAGAGAGTGCCATGG AATTACCTCCCATCCCAGAA
Product: bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase
Products: NA
Alternate protein names: Glutamine-synthetase adenylyltransferase; ATase; [Glutamate--ammonia-ligase] adenylyltransferase [H]
Number of amino acids: Translated: 954; Mature: 953
Protein sequence:
>954_residues MTMQKDSKKSLSTLITQTAERHWQRLEDVWSDGLSHLTPTAKQELKTVLGLSDYVAAQLSRHPEWINRLFMGDLTDVNRK HYDVELHELLSNATSEDMAKSVLRRFRNYQMVRLAWRDFLDYTSLETSLLDLSALAEALVICARDWLYKEMCAQYGTPMD KAGNPQPLLILGMGKLGGRELNFSSDIDLIFTFPEHGETLGGRRSLDNQQFFIRMGQRLVNLLDQITVDGFVFRVDMRLR PYGESGPLVVSFSALEDYYQEQGRDWERYAMVKARALGPWNHFSDELHSLLRPFVYRRYIDFSAIDSLRKMKQLIAQEVR RRQLTDNIKLGAGGIREVEFVVQSFQLIRGGREPALRQQSLFGAMDTLYSLGQFEYLAVDELKHSYLLLRRVENLLQAID DKQTQTLPNNPLDWARLCHVLDMANEVELRSHIEAAMAKIHRHFKATVGGEEGEEKTEHWTVQLWNVQQDDHALALFAEQ QIEDDKLWPMLSCWRETVIKRSIGPRGRETLDKLMPRLLEELLNQHSPSAAFEPVSKVLEQILTRTTYLELLCENPGARQ QLVSLCCASPWIATQLAKFPMLLDELIDPAHLYDTTSLDDYPSELRQYLLRVPEDDMEQQMEALRQFKLSQQLKIAAADV TGVLPVMQVSDHLTFLAEAIIEQVVMQAWQQVAQRHGVPGYLESSDTGFAVIGYGKLGGIELGYGSDLDLVFLYEAHKNM ENSLTNGDRPIEVGHFYLKLAQRILHLFSTRTTSGELYEVDMRLRPSGASGLMVSEIERFGEYQANEAWTWEHQALVRSR FVFGDNSLAVKFSHIRASVLEQSRDKAELKKAVREMRQKMRDHLLKVTEGQFDLKQSIGGIADIEFIAQYLVLANAHEYP ELSIWSDNVRIFAVLAELALLPIMSAQHLTQSYCWLRDENHRLTLQQKSGQLPYIEVAEHAERVLNIYRAVLES
Sequences:
>Translated_954_residues MTMQKDSKKSLSTLITQTAERHWQRLEDVWSDGLSHLTPTAKQELKTVLGLSDYVAAQLSRHPEWINRLFMGDLTDVNRK HYDVELHELLSNATSEDMAKSVLRRFRNYQMVRLAWRDFLDYTSLETSLLDLSALAEALVICARDWLYKEMCAQYGTPMD KAGNPQPLLILGMGKLGGRELNFSSDIDLIFTFPEHGETLGGRRSLDNQQFFIRMGQRLVNLLDQITVDGFVFRVDMRLR PYGESGPLVVSFSALEDYYQEQGRDWERYAMVKARALGPWNHFSDELHSLLRPFVYRRYIDFSAIDSLRKMKQLIAQEVR RRQLTDNIKLGAGGIREVEFVVQSFQLIRGGREPALRQQSLFGAMDTLYSLGQFEYLAVDELKHSYLLLRRVENLLQAID DKQTQTLPNNPLDWARLCHVLDMANEVELRSHIEAAMAKIHRHFKATVGGEEGEEKTEHWTVQLWNVQQDDHALALFAEQ QIEDDKLWPMLSCWRETVIKRSIGPRGRETLDKLMPRLLEELLNQHSPSAAFEPVSKVLEQILTRTTYLELLCENPGARQ QLVSLCCASPWIATQLAKFPMLLDELIDPAHLYDTTSLDDYPSELRQYLLRVPEDDMEQQMEALRQFKLSQQLKIAAADV TGVLPVMQVSDHLTFLAEAIIEQVVMQAWQQVAQRHGVPGYLESSDTGFAVIGYGKLGGIELGYGSDLDLVFLYEAHKNM ENSLTNGDRPIEVGHFYLKLAQRILHLFSTRTTSGELYEVDMRLRPSGASGLMVSEIERFGEYQANEAWTWEHQALVRSR FVFGDNSLAVKFSHIRASVLEQSRDKAELKKAVREMRQKMRDHLLKVTEGQFDLKQSIGGIADIEFIAQYLVLANAHEYP ELSIWSDNVRIFAVLAELALLPIMSAQHLTQSYCWLRDENHRLTLQQKSGQLPYIEVAEHAERVLNIYRAVLES >Mature_953_residues TMQKDSKKSLSTLITQTAERHWQRLEDVWSDGLSHLTPTAKQELKTVLGLSDYVAAQLSRHPEWINRLFMGDLTDVNRKH YDVELHELLSNATSEDMAKSVLRRFRNYQMVRLAWRDFLDYTSLETSLLDLSALAEALVICARDWLYKEMCAQYGTPMDK AGNPQPLLILGMGKLGGRELNFSSDIDLIFTFPEHGETLGGRRSLDNQQFFIRMGQRLVNLLDQITVDGFVFRVDMRLRP YGESGPLVVSFSALEDYYQEQGRDWERYAMVKARALGPWNHFSDELHSLLRPFVYRRYIDFSAIDSLRKMKQLIAQEVRR RQLTDNIKLGAGGIREVEFVVQSFQLIRGGREPALRQQSLFGAMDTLYSLGQFEYLAVDELKHSYLLLRRVENLLQAIDD KQTQTLPNNPLDWARLCHVLDMANEVELRSHIEAAMAKIHRHFKATVGGEEGEEKTEHWTVQLWNVQQDDHALALFAEQQ IEDDKLWPMLSCWRETVIKRSIGPRGRETLDKLMPRLLEELLNQHSPSAAFEPVSKVLEQILTRTTYLELLCENPGARQQ LVSLCCASPWIATQLAKFPMLLDELIDPAHLYDTTSLDDYPSELRQYLLRVPEDDMEQQMEALRQFKLSQQLKIAAADVT GVLPVMQVSDHLTFLAEAIIEQVVMQAWQQVAQRHGVPGYLESSDTGFAVIGYGKLGGIELGYGSDLDLVFLYEAHKNME NSLTNGDRPIEVGHFYLKLAQRILHLFSTRTTSGELYEVDMRLRPSGASGLMVSEIERFGEYQANEAWTWEHQALVRSRF VFGDNSLAVKFSHIRASVLEQSRDKAELKKAVREMRQKMRDHLLKVTEGQFDLKQSIGGIADIEFIAQYLVLANAHEYPE LSIWSDNVRIFAVLAELALLPIMSAQHLTQSYCWLRDENHRLTLQQKSGQLPYIEVAEHAERVLNIYRAVLES
Specific function: Adenylation and deadenylation of glutamate--ammonia ligase [H]
COG id: COG1391
COG function: function code OT; Glutamine synthetase adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glnE family [H]
Homologues:
Organism=Escherichia coli, GI1789433, Length=931, Percent_Identity=53.4908700322234, Blast_Score=926, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023057 - InterPro: IPR005190 - InterPro: IPR013546 [H]
Pfam domain/function: PF08335 GlnD_UR_UTase; PF03710 GlnE [H]
EC number: =2.7.7.42 [H]
Molecular weight: Translated: 109599; Mature: 109467
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMQKDSKKSLSTLITQTAERHWQRLEDVWSDGLSHLTPTAKQELKTVLGLSDYVAAQLS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHH RHPEWINRLFMGDLTDVNRKHYDVELHELLSNATSEDMAKSVLRRFRNYQMVRLAWRDFL CCHHHHHHHHHCCHHHCCCHHCCHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH DYTSLETSLLDLSALAEALVICARDWLYKEMCAQYGTPMDKAGNPQPLLILGMGKLGGRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCC LNFSSDIDLIFTFPEHGETLGGRRSLDNQQFFIRMGQRLVNLLDQITVDGFVFRVDMRLR CCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEC PYGESGPLVVSFSALEDYYQEQGRDWERYAMVKARALGPWNHFSDELHSLLRPFVYRRYI CCCCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH DFSAIDSLRKMKQLIAQEVRRRQLTDNIKLGAGGIREVEFVVQSFQLIRGGREPALRQQS HHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHH LFGAMDTLYSLGQFEYLAVDELKHSYLLLRRVENLLQAIDDKQTQTLPNNPLDWARLCHV HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHH LDMANEVELRSHIEAAMAKIHRHFKATVGGEEGEEKTEHWTVQLWNVQQDDHALALFAEQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHH QIEDDKLWPMLSCWRETVIKRSIGPRGRETLDKLMPRLLEELLNQHSPSAAFEPVSKVLE HCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH QILTRTTYLELLCENPGARQQLVSLCCASPWIATQLAKFPMLLDELIDPAHLYDTTSLDD HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCC YPSELRQYLLRVPEDDMEQQMEALRQFKLSQQLKIAAADVTGVLPVMQVSDHLTFLAEAI CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IEQVVMQAWQQVAQRHGVPGYLESSDTGFAVIGYGKLGGIELGYGSDLDLVFLYEAHKNM HHHHHHHHHHHHHHHCCCCCEECCCCCCEEEEEECCCCCEEECCCCCCCEEEEEHHHCCH ENSLTNGDRPIEVGHFYLKLAQRILHLFSTRTTSGELYEVDMRLRPSGASGLMVSEIERF HHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHHHH GEYQANEAWTWEHQALVRSRFVFGDNSLAVKFSHIRASVLEQSRDKAELKKAVREMRQKM CCCCCCCCCCHHHHHHHHHHHEECCCCEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHH RDHLLKVTEGQFDLKQSIGGIADIEFIAQYLVLANAHEYPELSIWSDNVRIFAVLAELAL HHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHH LPIMSAQHLTQSYCWLRDENHRLTLQQKSGQLPYIEVAEHAERVLNIYRAVLES HHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TMQKDSKKSLSTLITQTAERHWQRLEDVWSDGLSHLTPTAKQELKTVLGLSDYVAAQLS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHH RHPEWINRLFMGDLTDVNRKHYDVELHELLSNATSEDMAKSVLRRFRNYQMVRLAWRDFL CCHHHHHHHHHCCHHHCCCHHCCHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH DYTSLETSLLDLSALAEALVICARDWLYKEMCAQYGTPMDKAGNPQPLLILGMGKLGGRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCC LNFSSDIDLIFTFPEHGETLGGRRSLDNQQFFIRMGQRLVNLLDQITVDGFVFRVDMRLR CCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEC PYGESGPLVVSFSALEDYYQEQGRDWERYAMVKARALGPWNHFSDELHSLLRPFVYRRYI CCCCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH DFSAIDSLRKMKQLIAQEVRRRQLTDNIKLGAGGIREVEFVVQSFQLIRGGREPALRQQS HHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHH LFGAMDTLYSLGQFEYLAVDELKHSYLLLRRVENLLQAIDDKQTQTLPNNPLDWARLCHV HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHH LDMANEVELRSHIEAAMAKIHRHFKATVGGEEGEEKTEHWTVQLWNVQQDDHALALFAEQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHH QIEDDKLWPMLSCWRETVIKRSIGPRGRETLDKLMPRLLEELLNQHSPSAAFEPVSKVLE HCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH QILTRTTYLELLCENPGARQQLVSLCCASPWIATQLAKFPMLLDELIDPAHLYDTTSLDD HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCC YPSELRQYLLRVPEDDMEQQMEALRQFKLSQQLKIAAADVTGVLPVMQVSDHLTFLAEAI CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IEQVVMQAWQQVAQRHGVPGYLESSDTGFAVIGYGKLGGIELGYGSDLDLVFLYEAHKNM HHHHHHHHHHHHHHHCCCCCEECCCCCCEEEEEECCCCCEEECCCCCCCEEEEEHHHCCH ENSLTNGDRPIEVGHFYLKLAQRILHLFSTRTTSGELYEVDMRLRPSGASGLMVSEIERF HHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHHHH GEYQANEAWTWEHQALVRSRFVFGDNSLAVKFSHIRASVLEQSRDKAELKKAVREMRQKM CCCCCCCCCCHHHHHHHHHHHEECCCCEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHH RDHLLKVTEGQFDLKQSIGGIADIEFIAQYLVLANAHEYPELSIWSDNVRIFAVLAELAL HHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHH LPIMSAQHLTQSYCWLRDENHRLTLQQKSGQLPYIEVAEHAERVLNIYRAVLES HHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]