| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is 120597659
Identifier: 120597659
GI number: 120597659
Start: 932358
End: 932819
Strand: Direct
Name: 120597659
Synonym: Sputw3181_0828
Alternate gene names: NA
Gene position: 932358-932819 (Clockwise)
Preceding gene: 120597658
Following gene: 120597660
Centisome position: 19.8
GC content: 41.77
Gene sequence:
>462_bases GTGAAAATCTCTGAATTACAAAAAGAACGAGGCATAGAATTGCCAAGCGATTATCTTGAGTTTGTCGCAGGTATCGACGC TGGCGAAGATTACTGCTTTAACGAATTCCCAGATGAGTACCCAGATTTCGAGGGAAGGTGCTGGGCGTTTTTTGACGAAG AGTTACTTTGTGAAAACATTGAAATGTCAGGAGTAGGCAACGCTCCAGCACATCGACAATTGGAACTATATTTAAAATGC TACCAAGAGTTCTCGAACAGTGAGTTTGTTCATTCATCAGAGGGTAAGCTCCCTATAAACAGAGTAGCCAATGGGTTTGT TGTTGCAGAAGAAAACGGTGATCTATTGTACTTAGACCCAGAAGACAACTTCTCAGTATGGATATTCCATCATGATGGTA GTGATGTTAAAAAGGTATCAAATTCAATGAGCGAGTGGTTGGCTCGTACCACCACCGCTTAA
Upstream 100 bases:
>100_bases GTTCTTTTCATACAGATAGTTAACTGTGCGCGTTTCACTGGTCTAATGAGGTTAACGCGCAGCGCATAAATACGAAGACG TTAAGCGAAAAGGAAGAATC
Downstream 100 bases:
>100_bases CAAGTCGGCCAAAATAGCTCGGCCAAAACGGCCAAAATGGACACCCAGCCTTAATGGCGCTTCAATAAACCTCCGACTAT GCTTTGGTTAAGCATTAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MKISELQKERGIELPSDYLEFVAGIDAGEDYCFNEFPDEYPDFEGRCWAFFDEELLCENIEMSGVGNAPAHRQLELYLKC YQEFSNSEFVHSSEGKLPINRVANGFVVAEENGDLLYLDPEDNFSVWIFHHDGSDVKKVSNSMSEWLARTTTA
Sequences:
>Translated_153_residues MKISELQKERGIELPSDYLEFVAGIDAGEDYCFNEFPDEYPDFEGRCWAFFDEELLCENIEMSGVGNAPAHRQLELYLKC YQEFSNSEFVHSSEGKLPINRVANGFVVAEENGDLLYLDPEDNFSVWIFHHDGSDVKKVSNSMSEWLARTTTA >Mature_153_residues MKISELQKERGIELPSDYLEFVAGIDAGEDYCFNEFPDEYPDFEGRCWAFFDEELLCENIEMSGVGNAPAHRQLELYLKC YQEFSNSEFVHSSEGKLPINRVANGFVVAEENGDLLYLDPEDNFSVWIFHHDGSDVKKVSNSMSEWLARTTTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17522; Mature: 17522
Theoretical pI: Translated: 4.02; Mature: 4.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKISELQKERGIELPSDYLEFVAGIDAGEDYCFNEFPDEYPDFEGRCWAFFDEELLCENI CCHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHCCC EMSGVGNAPAHRQLELYLKCYQEFSNSEFVHSSEGKLPINRVANGFVVAEENGDLLYLDP CCCCCCCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHCCCCEEEEECCCCEEEECC EDNFSVWIFHHDGSDVKKVSNSMSEWLARTTTA CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKISELQKERGIELPSDYLEFVAGIDAGEDYCFNEFPDEYPDFEGRCWAFFDEELLCENI CCHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHCCC EMSGVGNAPAHRQLELYLKCYQEFSNSEFVHSSEGKLPINRVANGFVVAEENGDLLYLDP CCCCCCCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHCCCCEEEEECCCCEEEECC EDNFSVWIFHHDGSDVKKVSNSMSEWLARTTTA CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA