| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is fusA2 [H]
Identifier: 120597620
GI number: 120597620
Start: 885680
End: 887773
Strand: Direct
Name: fusA2 [H]
Synonym: Sputw3181_0789
Alternate gene names: 120597620
Gene position: 885680-887773 (Clockwise)
Preceding gene: 120597619
Following gene: 120597622
Centisome position: 18.81
GC content: 45.89
Gene sequence:
>2094_bases ATGACCGAATTATCCAAATACAGAAACATTGGTATCTTCGCTCACGTTGACGCGGGTAAAACCACGACCACCGAGCGTAT TCTTAAGCTAACTGGTAGAATTCACAAAGCTGGTGAAACACACGATGGTGAATCTACAACAGACTTCATGGTTCAGGAAG CTGAGCGCGGTATTACCATTCAATCAGCAGCAGTAAGCTGTTTCTGGAAAGAACACCGTTTCAACGTTATTGATACCCCA GGGCACGTTGACTTCACCGTTGAAGTTTACCGTTCTCTGAAAGTACTCGACGGCGGTATAGGTGTATTCTGTGGTAGCGG CGGTGTTGAGCCTCAATCAGAAACTAACTGGCGCTATGCTAACGAATCTGAAGTTGCTCGTATCATCTTCGTAAACAAGT TAGACCGTATGGGTGCTGACTTCCTGCGTGTTGTTAAGCAGACTAGAGATGTTTTAGCGGCTAACCCACTGGTTATGGTT CTGCCTATCGGTATCGAAGACGAGTTTAAAGGTGTTGTTGACCTATTAACCCGTAAAGCCTACATATGGGATGATTCAGG TTTACCAGAAAACTTCAGTGTGACAGACGTTCCAGCTGACATGGTTGATCAAGTTGAAGAATACCGTGAAATGCTGATCG AATCTGCTGTTGAGCAAGATGACGATCTGATGGAAGCCTACATGGAAGGCGAAGAGCCATCGATTGAAGACCTGAAACGT TGTATCCGTAAGGGTACTCGTACAATGGCTTTATTCCCAACATACTGTGGTTCTGCGTTCAAGAACAAGGGTATGCAACT GGTTCTAGACGCTGTTGTTGATTACTTACCAGCGCCAAACGAAGTTGATCCACAACCTTTAACAGACGAAGAAGGTAACG AAACTGGCGAACACGCTATCGTTTCTGCCGATGAGCCATTGAAAGCGTTAGCGTTCAAAATTATGGACGACCGTTTCGGT GCTCTGACCTTCGTACGTGTTTATTCTGGCCGTTTGAAGAAAGGCGATACCATTCTTAACAGTGCGACTGGTAAGACTGA ACGTATCGGCCGTATGTGCGAAATGCACGCAAACGACCGTATCGAAATTGAATCGGCTGAAGCTGGTGACATTATCGCTA TCGTGGGCATGAAGAACGTGCAAACGGGTCACACTCTGTGTGATGTTAAGCACCCATGTACATTAGAAGCCATGGTGTTC CCTGAGCCTGTAATCTCTATCGCAGTAGCGCCAAAAGATAAAGGTGGTAGCGAGAAGATGGCTATCGCTATCGGTAAGAT GATCGCTGAAGATCCATCTTTCCGCGTAGAAACAGACGAAGATTCAGGTGAAACCATCCTTAAAGGTATGGGTGAACTGC ACTTAGATATCAAAGTTGACATCTTGAAGCGTACTTACGGCGTTGAGTTGATCGTAGGTGAGCCACAAGTGGCCTACCGC GAAACCATTACTCAAATGGTTGAAGACCAATACACCCACAAGAAACAATCTGGTGGTTCTGGTCAATTCGGTAAGATTGA ATACATCATCCGTCCTGGTGAGCCAAATTCTGGTTTCGTATTCAAATCTTCAGTTGTGGGTGGTAGTGTTCCTAAGGAAT TCTGGCCTGCAGTTGAGAAAGGTTTTGCGAGCATGATGAACACGGGTACTATCGCTGGCTTCCCAGTGTTAGACGTAGAG TTCGAATTAACTGACGGTGCTTACCACGCAGTTGACTCATCAGCTATCGCGTTCGAAATCGCTGCTAAAGCGGCATTCCG TCAGTCTATCGCTAAAGCTAAGCCACAACTTCTTGAGCCAATCATGAAAGTTGACGTGTTCAGCCCAGAAGACAACGTGG GTGATGTGATCGGTGACTTAAACCGTCGTCGCGGTATGATCAAAGACCAAATCGCAGGTGTGACTGGTGTTCGTATTAAG GCTGACGTACCGTTATCAGAAATGTTCGGTTATATCGGTACTCTACGTACAATGACTTCTGGTCGTGGTCAGTTCTCTAT GGAGTTCTCACACTACACACCATGTCCAAACAGCGTAGCTGAAAAAGTAGTTGAGCAAGTTAAAGAGCGTAAAGCTGCTG AAGCTAAGAAGTAA
Upstream 100 bases:
>100_bases TCCAATTTACAATATGCGCCTAAAATAATCTGATGTGCGGTGTGTCGGTGGTTTGTCGCATACTCCGTCTACTTCTTAAA CTAATCATTAAAGTTGAATC
Downstream 100 bases:
>100_bases TTCTTAACTCAACACGAATAGAGACCGCTGCTAAGCCCTAGGCTAGCAGCGGTTTTTTTATGGGCGTACATTCTGGTAGA CGGTAGACGGTAGACGGTAG
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: EF-G 2 [H]
Number of amino acids: Translated: 697; Mature: 696
Protein sequence:
>697_residues MTELSKYRNIGIFAHVDAGKTTTTERILKLTGRIHKAGETHDGESTTDFMVQEAERGITIQSAAVSCFWKEHRFNVIDTP GHVDFTVEVYRSLKVLDGGIGVFCGSGGVEPQSETNWRYANESEVARIIFVNKLDRMGADFLRVVKQTRDVLAANPLVMV LPIGIEDEFKGVVDLLTRKAYIWDDSGLPENFSVTDVPADMVDQVEEYREMLIESAVEQDDDLMEAYMEGEEPSIEDLKR CIRKGTRTMALFPTYCGSAFKNKGMQLVLDAVVDYLPAPNEVDPQPLTDEEGNETGEHAIVSADEPLKALAFKIMDDRFG ALTFVRVYSGRLKKGDTILNSATGKTERIGRMCEMHANDRIEIESAEAGDIIAIVGMKNVQTGHTLCDVKHPCTLEAMVF PEPVISIAVAPKDKGGSEKMAIAIGKMIAEDPSFRVETDEDSGETILKGMGELHLDIKVDILKRTYGVELIVGEPQVAYR ETITQMVEDQYTHKKQSGGSGQFGKIEYIIRPGEPNSGFVFKSSVVGGSVPKEFWPAVEKGFASMMNTGTIAGFPVLDVE FELTDGAYHAVDSSAIAFEIAAKAAFRQSIAKAKPQLLEPIMKVDVFSPEDNVGDVIGDLNRRRGMIKDQIAGVTGVRIK ADVPLSEMFGYIGTLRTMTSGRGQFSMEFSHYTPCPNSVAEKVVEQVKERKAAEAKK
Sequences:
>Translated_697_residues MTELSKYRNIGIFAHVDAGKTTTTERILKLTGRIHKAGETHDGESTTDFMVQEAERGITIQSAAVSCFWKEHRFNVIDTP GHVDFTVEVYRSLKVLDGGIGVFCGSGGVEPQSETNWRYANESEVARIIFVNKLDRMGADFLRVVKQTRDVLAANPLVMV LPIGIEDEFKGVVDLLTRKAYIWDDSGLPENFSVTDVPADMVDQVEEYREMLIESAVEQDDDLMEAYMEGEEPSIEDLKR CIRKGTRTMALFPTYCGSAFKNKGMQLVLDAVVDYLPAPNEVDPQPLTDEEGNETGEHAIVSADEPLKALAFKIMDDRFG ALTFVRVYSGRLKKGDTILNSATGKTERIGRMCEMHANDRIEIESAEAGDIIAIVGMKNVQTGHTLCDVKHPCTLEAMVF PEPVISIAVAPKDKGGSEKMAIAIGKMIAEDPSFRVETDEDSGETILKGMGELHLDIKVDILKRTYGVELIVGEPQVAYR ETITQMVEDQYTHKKQSGGSGQFGKIEYIIRPGEPNSGFVFKSSVVGGSVPKEFWPAVEKGFASMMNTGTIAGFPVLDVE FELTDGAYHAVDSSAIAFEIAAKAAFRQSIAKAKPQLLEPIMKVDVFSPEDNVGDVIGDLNRRRGMIKDQIAGVTGVRIK ADVPLSEMFGYIGTLRTMTSGRGQFSMEFSHYTPCPNSVAEKVVEQVKERKAAEAKK >Mature_696_residues TELSKYRNIGIFAHVDAGKTTTTERILKLTGRIHKAGETHDGESTTDFMVQEAERGITIQSAAVSCFWKEHRFNVIDTPG HVDFTVEVYRSLKVLDGGIGVFCGSGGVEPQSETNWRYANESEVARIIFVNKLDRMGADFLRVVKQTRDVLAANPLVMVL PIGIEDEFKGVVDLLTRKAYIWDDSGLPENFSVTDVPADMVDQVEEYREMLIESAVEQDDDLMEAYMEGEEPSIEDLKRC IRKGTRTMALFPTYCGSAFKNKGMQLVLDAVVDYLPAPNEVDPQPLTDEEGNETGEHAIVSADEPLKALAFKIMDDRFGA LTFVRVYSGRLKKGDTILNSATGKTERIGRMCEMHANDRIEIESAEAGDIIAIVGMKNVQTGHTLCDVKHPCTLEAMVFP EPVISIAVAPKDKGGSEKMAIAIGKMIAEDPSFRVETDEDSGETILKGMGELHLDIKVDILKRTYGVELIVGEPQVAYRE TITQMVEDQYTHKKQSGGSGQFGKIEYIIRPGEPNSGFVFKSSVVGGSVPKEFWPAVEKGFASMMNTGTIAGFPVLDVEF ELTDGAYHAVDSSAIAFEIAAKAAFRQSIAKAKPQLLEPIMKVDVFSPEDNVGDVIGDLNRRRGMIKDQIAGVTGVRIKA DVPLSEMFGYIGTLRTMTSGRGQFSMEFSHYTPCPNSVAEKVVEQVKERKAAEAKK
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=695, Percent_Identity=43.4532374100719, Blast_Score=558, Evalue=1e-159, Organism=Homo sapiens, GI19923640, Length=709, Percent_Identity=37.7997179125529, Blast_Score=412, Evalue=1e-115, Organism=Homo sapiens, GI25306283, Length=394, Percent_Identity=42.8934010152284, Blast_Score=282, Evalue=8e-76, Organism=Homo sapiens, GI25306287, Length=288, Percent_Identity=46.1805555555556, Blast_Score=238, Evalue=1e-62, Organism=Homo sapiens, GI157426893, Length=149, Percent_Identity=40.2684563758389, Blast_Score=106, Evalue=6e-23, Organism=Homo sapiens, GI4503483, Length=438, Percent_Identity=25.3424657534247, Blast_Score=106, Evalue=7e-23, Organism=Homo sapiens, GI94966754, Length=136, Percent_Identity=37.5, Blast_Score=86, Evalue=1e-16, Organism=Homo sapiens, GI310132016, Length=128, Percent_Identity=38.28125, Blast_Score=72, Evalue=3e-12, Organism=Homo sapiens, GI310110807, Length=128, Percent_Identity=38.28125, Blast_Score=72, Evalue=3e-12, Organism=Homo sapiens, GI310123363, Length=128, Percent_Identity=38.28125, Blast_Score=72, Evalue=3e-12, Organism=Escherichia coli, GI1789738, Length=696, Percent_Identity=54.4540229885057, Blast_Score=747, Evalue=0.0, Organism=Escherichia coli, GI1790835, Length=503, Percent_Identity=25.2485089463221, Blast_Score=138, Evalue=1e-33, Organism=Escherichia coli, GI48994988, Length=149, Percent_Identity=37.5838926174497, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1788922, Length=154, Percent_Identity=35.7142857142857, Blast_Score=93, Evalue=5e-20, Organism=Caenorhabditis elegans, GI17533571, Length=693, Percent_Identity=39.6825396825397, Blast_Score=484, Evalue=1e-137, Organism=Caenorhabditis elegans, GI17556745, Length=710, Percent_Identity=29.2957746478873, Blast_Score=286, Evalue=3e-77, Organism=Caenorhabditis elegans, GI17557151, Length=151, Percent_Identity=37.7483443708609, Blast_Score=104, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17506493, Length=187, Percent_Identity=34.7593582887701, Blast_Score=87, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17552882, Length=135, Percent_Identity=31.8518518518519, Blast_Score=70, Evalue=4e-12, Organism=Caenorhabditis elegans, GI71988819, Length=136, Percent_Identity=32.3529411764706, Blast_Score=70, Evalue=5e-12, Organism=Caenorhabditis elegans, GI71988811, Length=136, Percent_Identity=32.3529411764706, Blast_Score=69, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6323098, Length=696, Percent_Identity=40.8045977011494, Blast_Score=543, Evalue=1e-155, Organism=Saccharomyces cerevisiae, GI6322359, Length=791, Percent_Identity=30.8470290771176, Blast_Score=340, Evalue=5e-94, Organism=Saccharomyces cerevisiae, GI6324707, Length=437, Percent_Identity=26.0869565217391, Blast_Score=96, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6320593, Length=437, Percent_Identity=26.0869565217391, Blast_Score=96, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6323320, Length=158, Percent_Identity=36.7088607594937, Blast_Score=92, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6324166, Length=149, Percent_Identity=33.5570469798658, Blast_Score=73, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6324761, Length=128, Percent_Identity=34.375, Blast_Score=67, Evalue=8e-12, Organism=Drosophila melanogaster, GI24582462, Length=698, Percent_Identity=40.8309455587393, Blast_Score=536, Evalue=1e-152, Organism=Drosophila melanogaster, GI221458488, Length=730, Percent_Identity=31.9178082191781, Blast_Score=346, Evalue=3e-95, Organism=Drosophila melanogaster, GI78706572, Length=155, Percent_Identity=36.1290322580645, Blast_Score=100, Evalue=4e-21, Organism=Drosophila melanogaster, GI28574573, Length=143, Percent_Identity=36.3636363636364, Blast_Score=88, Evalue=2e-17, Organism=Drosophila melanogaster, GI24585711, Length=158, Percent_Identity=37.3417721518987, Blast_Score=87, Evalue=4e-17, Organism=Drosophila melanogaster, GI24585713, Length=158, Percent_Identity=37.3417721518987, Blast_Score=87, Evalue=4e-17, Organism=Drosophila melanogaster, GI24585709, Length=158, Percent_Identity=37.3417721518987, Blast_Score=87, Evalue=5e-17, Organism=Drosophila melanogaster, GI19921738, Length=147, Percent_Identity=29.9319727891156, Blast_Score=66, Evalue=7e-11,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 76737; Mature: 76606
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELSKYRNIGIFAHVDAGKTTTTERILKLTGRIHKAGETHDGESTTDFMVQEAERGITI CCCCHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEE QSAAVSCFWKEHRFNVIDTPGHVDFTVEVYRSLKVLDGGIGVFCGSGGVEPQSETNWRYA EHHHHHHHHHHCCCCEECCCCCEEEHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCC NESEVARIIFVNKLDRMGADFLRVVKQTRDVLAANPLVMVLPIGIEDEFKGVVDLLTRKA CCCCEEEEEEEHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCE YIWDDSGLPENFSVTDVPADMVDQVEEYREMLIESAVEQDDDLMEAYMEGEEPSIEDLKR EEECCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHH CIRKGTRTMALFPTYCGSAFKNKGMQLVLDAVVDYLPAPNEVDPQPLTDEEGNETGEHAI HHHCCCCEEEEEHHHHCHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEE VSADEPLKALAFKIMDDRFGALTFVRVYSGRLKKGDTILNSATGKTERIGRMCEMHANDR EECCCCHHHHHHHHHHCCCCCEEEEHHHCCCCCCCCCHHCCCCCCHHHHHHHHHHCCCCE IEIESAEAGDIIAIVGMKNVQTGHTLCDVKHPCTLEAMVFPEPVISIAVAPKDKGGSEKM EEEECCCCCCEEEEEECCCCCCCCCEECCCCCCEEEEEECCCCEEEEEECCCCCCCCCHH AIAIGKMIAEDPSFRVETDEDSGETILKGMGELHLDIKVDILKRTYGVELIVGEPQVAYR HHHHHHHHHCCCCCEEECCCCCCHHHHHCCCCEEEEEEEEEEHHHCCEEEEECCCCHHHH ETITQMVEDQYTHKKQSGGSGQFGKIEYIIRPGEPNSGFVFKSSVVGGSVPKEFWPAVEK HHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHH GFASMMNTGTIAGFPVLDVEFELTDGAYHAVDSSAIAFEIAAKAAFRQSIAKAKPQLLEP HHHHHHCCCCCCCCEEEEEEEEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH IMKVDVFSPEDNVGDVIGDLNRRRGMIKDQIAGVTGVRIKADVPLSEMFGYIGTLRTMTS HHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCC GRGQFSMEFSHYTPCPNSVAEKVVEQVKERKAAEAKK CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TELSKYRNIGIFAHVDAGKTTTTERILKLTGRIHKAGETHDGESTTDFMVQEAERGITI CCCHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEE QSAAVSCFWKEHRFNVIDTPGHVDFTVEVYRSLKVLDGGIGVFCGSGGVEPQSETNWRYA EHHHHHHHHHHCCCCEECCCCCEEEHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCC NESEVARIIFVNKLDRMGADFLRVVKQTRDVLAANPLVMVLPIGIEDEFKGVVDLLTRKA CCCCEEEEEEEHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCE YIWDDSGLPENFSVTDVPADMVDQVEEYREMLIESAVEQDDDLMEAYMEGEEPSIEDLKR EEECCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHH CIRKGTRTMALFPTYCGSAFKNKGMQLVLDAVVDYLPAPNEVDPQPLTDEEGNETGEHAI HHHCCCCEEEEEHHHHCHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEE VSADEPLKALAFKIMDDRFGALTFVRVYSGRLKKGDTILNSATGKTERIGRMCEMHANDR EECCCCHHHHHHHHHHCCCCCEEEEHHHCCCCCCCCCHHCCCCCCHHHHHHHHHHCCCCE IEIESAEAGDIIAIVGMKNVQTGHTLCDVKHPCTLEAMVFPEPVISIAVAPKDKGGSEKM EEEECCCCCCEEEEEECCCCCCCCCEECCCCCCEEEEEECCCCEEEEEECCCCCCCCCHH AIAIGKMIAEDPSFRVETDEDSGETILKGMGELHLDIKVDILKRTYGVELIVGEPQVAYR HHHHHHHHHCCCCCEEECCCCCCHHHHHCCCCEEEEEEEEEEHHHCCEEEEECCCCHHHH ETITQMVEDQYTHKKQSGGSGQFGKIEYIIRPGEPNSGFVFKSSVVGGSVPKEFWPAVEK HHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHH GFASMMNTGTIAGFPVLDVEFELTDGAYHAVDSSAIAFEIAAKAAFRQSIAKAKPQLLEP HHHHHHCCCCCCCCEEEEEEEEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH IMKVDVFSPEDNVGDVIGDLNRRRGMIKDQIAGVTGVRIKADVPLSEMFGYIGTLRTMTS HHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCC GRGQFSMEFSHYTPCPNSVAEKVVEQVKERKAAEAKK CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA