| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
Click here to switch to the map view.
The map label for this gene is fbpB2 [H]
Identifier: 120597546
GI number: 120597546
Start: 793143
End: 794777
Strand: Direct
Name: fbpB2 [H]
Synonym: Sputw3181_0715
Alternate gene names: 120597546
Gene position: 793143-794777 (Clockwise)
Preceding gene: 120597545
Following gene: 120597547
Centisome position: 16.85
GC content: 44.65
Gene sequence:
>1635_bases ATGATTTTAGGATTAGCCAGAAGCTGGTCGCTTGCTGGTTATGCCGTGGCAGCATTACTCGTATTGCCTCTTTTTGCCTT AATATTTCAAGCATTTCAGCCCGATGAGGCAGTGTTTGACCACTTAATGGCAACTGTGTTACCCACTTATATCATCAACA GCTTATTACTGATTTTTTGGGTGAGTGTGGGTGCGCTTTTACTCGCTTTACCCTGCGCTTGGTTGGTGGCTCGCTGCGAA TTTATTGGAAGGCGTTATTTGCAGTGGGCGCTGTTACTGCCTTTGGCTATGCCTGCCTATATTGTTGCTTATGTATATAC CGATTTACTCGATTATGCAGGGCCTGTTCAGCGAGGGCTGCGCTTACTCTTTGATTGGCGTTCATCTCAAGAATACTTTT TTCCTGATATTCGTTCCTTAGGCGGTGCAGCTTGTATGCTGTCGCTCGTACTTTTTCCTTATATTTATCTTTTAGCGCGC ACCGCTTTTATGGAGCAGTCCCTAAGCTTAGCCCATGCCTCTCGTATTATGGGCTGTTCTTCATGGCAGAGCTTTTGGCG TCTCTCTTTGCCAATGGCAAGACCCGCAATCGCCGTGGGAGTTGCTTTGGTCGCGATGGAAACCGCGGCAGATTTTGCGA CTGTAAGCTATTTTGCTGTGCCCACTTTAACTACTGCGGTATACGATACATGGCTCGGCTACGGTAATCTGACTGCTGCG GCGAAATTGTCAGCCATTATTTTACTGGTGATCTTTATGCTCATTGGAGTCGAGCGATTTGCGCGCCGTAAACAGCAGCT ATTTCAAAAACAGTCACGTATTCAGACTACTGATTTATATCGACTTACCACTAAACAAACTGTGTATGCACTCATTTTTT GTGGAACAGTACTCTTACTATCGTTCTTATTACCTTTTGGGATTTTAGTAACCTATGCTATTGGTTATTTTGAAAAAAGT TGGGATTCAAGTTTTTGGCAATTGAGTCTTAATAGCCTTAGTCTTGCGTTAGTCACCAGCATACTCTGTTGTTTGATAGC TTTGTTCTTGATGTTTGTGCGTCGTATCAGCCCAAGGCGCAGTGATACATTACCTTCACGTTTAGCATCAACAGGCTATG CCTTGCCCGGTACTGTGTTAGCTATCGGAGTATTAGTGCCGTTAACTTTGCTCGATTTTGGAATTAACGATCTGGCTGAG TATATCGGTGTCAAAGGTCCTGGACTCCTACTCACGGGCAGTGTAGTGGCTTTGGTTTTTGCTTTTTGCGTGCGCTTTAT TGCCATCGCAATCGGGAGCATTGAAAGTAGCTACAAGCGCATCTCACCATCATTAGATATGGTGAGTTTAACAATGGGAC AGAGTCCAATAAGACTACTCAGTCGAGTACATTTACCCTTGCTCTCAAAGGGGATTTTTGCCGCTGCGTTGTTGGTTTTT ATCGAAAGCATGAAGGAACTGCCAGCCGCTTTGCTGCTAAGGCCGATTGGGTTTGAAAATCTTGCAACTCATGTCTTTCA GTTTGTGTCCGATGAAAAACTGGAACATGGCGCTCTAGCTGCTATTGTGATTGTCATCGTGGGCTTAGTGCCTCTCATTT ATTTAAATCGTTCTTTGGAGCAACACAGCGGATGA
Upstream 100 bases:
>100_bases ATGAAGTACAGTTTGATTTGTAGTTGCTTGTTATTAAAAGCATTGCATTAATATTAAAGCCAGCGCCATTTATTGGCGCT GTGACTTTTTAAGGATTGAC
Downstream 100 bases:
>100_bases CTCGTACGCTCACCCTTCACCAAGTTCATAGTGATTATCAGGGCCAGAAAGTGCTCAAAGGCTTAAGTTTAGATCTTGCT CAAGGAGAAATTCTTGCACT
Product: binding-protein-dependent transport systems inner membrane component
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: Iron(III)-transport system permease protein fbpB 2 [H]
Number of amino acids: Translated: 544; Mature: 544
Protein sequence:
>544_residues MILGLARSWSLAGYAVAALLVLPLFALIFQAFQPDEAVFDHLMATVLPTYIINSLLLIFWVSVGALLLALPCAWLVARCE FIGRRYLQWALLLPLAMPAYIVAYVYTDLLDYAGPVQRGLRLLFDWRSSQEYFFPDIRSLGGAACMLSLVLFPYIYLLAR TAFMEQSLSLAHASRIMGCSSWQSFWRLSLPMARPAIAVGVALVAMETAADFATVSYFAVPTLTTAVYDTWLGYGNLTAA AKLSAIILLVIFMLIGVERFARRKQQLFQKQSRIQTTDLYRLTTKQTVYALIFCGTVLLLSFLLPFGILVTYAIGYFEKS WDSSFWQLSLNSLSLALVTSILCCLIALFLMFVRRISPRRSDTLPSRLASTGYALPGTVLAIGVLVPLTLLDFGINDLAE YIGVKGPGLLLTGSVVALVFAFCVRFIAIAIGSIESSYKRISPSLDMVSLTMGQSPIRLLSRVHLPLLSKGIFAAALLVF IESMKELPAALLLRPIGFENLATHVFQFVSDEKLEHGALAAIVIVIVGLVPLIYLNRSLEQHSG
Sequences:
>Translated_544_residues MILGLARSWSLAGYAVAALLVLPLFALIFQAFQPDEAVFDHLMATVLPTYIINSLLLIFWVSVGALLLALPCAWLVARCE FIGRRYLQWALLLPLAMPAYIVAYVYTDLLDYAGPVQRGLRLLFDWRSSQEYFFPDIRSLGGAACMLSLVLFPYIYLLAR TAFMEQSLSLAHASRIMGCSSWQSFWRLSLPMARPAIAVGVALVAMETAADFATVSYFAVPTLTTAVYDTWLGYGNLTAA AKLSAIILLVIFMLIGVERFARRKQQLFQKQSRIQTTDLYRLTTKQTVYALIFCGTVLLLSFLLPFGILVTYAIGYFEKS WDSSFWQLSLNSLSLALVTSILCCLIALFLMFVRRISPRRSDTLPSRLASTGYALPGTVLAIGVLVPLTLLDFGINDLAE YIGVKGPGLLLTGSVVALVFAFCVRFIAIAIGSIESSYKRISPSLDMVSLTMGQSPIRLLSRVHLPLLSKGIFAAALLVF IESMKELPAALLLRPIGFENLATHVFQFVSDEKLEHGALAAIVIVIVGLVPLIYLNRSLEQHSG >Mature_544_residues MILGLARSWSLAGYAVAALLVLPLFALIFQAFQPDEAVFDHLMATVLPTYIINSLLLIFWVSVGALLLALPCAWLVARCE FIGRRYLQWALLLPLAMPAYIVAYVYTDLLDYAGPVQRGLRLLFDWRSSQEYFFPDIRSLGGAACMLSLVLFPYIYLLAR TAFMEQSLSLAHASRIMGCSSWQSFWRLSLPMARPAIAVGVALVAMETAADFATVSYFAVPTLTTAVYDTWLGYGNLTAA AKLSAIILLVIFMLIGVERFARRKQQLFQKQSRIQTTDLYRLTTKQTVYALIFCGTVLLLSFLLPFGILVTYAIGYFEKS WDSSFWQLSLNSLSLALVTSILCCLIALFLMFVRRISPRRSDTLPSRLASTGYALPGTVLAIGVLVPLTLLDFGINDLAE YIGVKGPGLLLTGSVVALVFAFCVRFIAIAIGSIESSYKRISPSLDMVSLTMGQSPIRLLSRVHLPLLSKGIFAAALLVF IESMKELPAALLLRPIGFENLATHVFQFVSDEKLEHGALAAIVIVIVGLVPLIYLNRSLEQHSG
Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1178
COG function: function code P; ABC-type Fe3+ transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transmembrane type-1 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 59977; Mature: 59977
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILGLARSWSLAGYAVAALLVLPLFALIFQAFQPDEAVFDHLMATVLPTYIINSLLLIFW CCEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VSVGALLLALPCAWLVARCEFIGRRYLQWALLLPLAMPAYIVAYVYTDLLDYAGPVQRGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH RLLFDWRSSQEYFFPDIRSLGGAACMLSLVLFPYIYLLARTAFMEQSLSLAHASRIMGCS HHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH SWQSFWRLSLPMARPAIAVGVALVAMETAADFATVSYFAVPTLTTAVYDTWLGYGNLTAA HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH AKLSAIILLVIFMLIGVERFARRKQQLFQKQSRIQTTDLYRLTTKQTVYALIFCGTVLLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH SFLLPFGILVTYAIGYFEKSWDSSFWQLSLNSLSLALVTSILCCLIALFLMFVRRISPRR HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SDTLPSRLASTGYALPGTVLAIGVLVPLTLLDFGINDLAEYIGVKGPGLLLTGSVVALVF CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEHHHHHHHHHH AFCVRFIAIAIGSIESSYKRISPSLDMVSLTMGQSPIRLLSRVHLPLLSKGIFAAALLVF HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IESMKELPAALLLRPIGFENLATHVFQFVSDEKLEHGALAAIVIVIVGLVPLIYLNRSLE HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QHSG HCCC >Mature Secondary Structure MILGLARSWSLAGYAVAALLVLPLFALIFQAFQPDEAVFDHLMATVLPTYIINSLLLIFW CCEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VSVGALLLALPCAWLVARCEFIGRRYLQWALLLPLAMPAYIVAYVYTDLLDYAGPVQRGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH RLLFDWRSSQEYFFPDIRSLGGAACMLSLVLFPYIYLLARTAFMEQSLSLAHASRIMGCS HHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH SWQSFWRLSLPMARPAIAVGVALVAMETAADFATVSYFAVPTLTTAVYDTWLGYGNLTAA HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH AKLSAIILLVIFMLIGVERFARRKQQLFQKQSRIQTTDLYRLTTKQTVYALIFCGTVLLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH SFLLPFGILVTYAIGYFEKSWDSSFWQLSLNSLSLALVTSILCCLIALFLMFVRRISPRR HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SDTLPSRLASTGYALPGTVLAIGVLVPLTLLDFGINDLAEYIGVKGPGLLLTGSVVALVF CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEHHHHHHHHHH AFCVRFIAIAIGSIESSYKRISPSLDMVSLTMGQSPIRLLSRVHLPLLSKGIFAAALLVF HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IESMKELPAALLLRPIGFENLATHVFQFVSDEKLEHGALAAIVIVIVGLVPLIYLNRSLE HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QHSG HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800; 7927717 [H]