| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is yjeE [H]
Identifier: 120597488
GI number: 120597488
Start: 724314
End: 724772
Strand: Direct
Name: yjeE [H]
Synonym: Sputw3181_0657
Alternate gene names: 120597488
Gene position: 724314-724772 (Clockwise)
Preceding gene: 120597487
Following gene: 120597489
Centisome position: 15.38
GC content: 41.18
Gene sequence:
>459_bases ATGACAGAGTTAACCTTTTTCTTAAATAATGAAGACGACACTATTGCGGTAGGGCAGCAACTGGCTCGCTATATTAAAGC GCCGTTAACTCTTTATTTAACGGGTGATTTAGGCGCAGGAAAAACGACACTGAGTCGAGGGTTAATTCAAGGGCTTGGTC ATCAAGGGGCGGTAAAAAGTCCTACATACACACTCGTTGAACCTTATGAACTTAACGGTGTCGAAATTTATCATTTTGAT TTGTATCGCCTCAACGATCCTGAAGAACTCGAATTTATGGGGATCCGCGATTACTTTTCAGATAAGAGTCTTTGCATAGT GGAATGGCCCGATAAAGGGGAAGGTTTACTGCCAGATGCCGATATCCATTTGCATTTGAGTTATGTAAATTCGGGCCGTG AAATCCATATTCAAGCCCTGTCTAAATCAGGTGAAAAGTTATTAGCTGCGATAAAATAA
Upstream 100 bases:
>100_bases GATTTACTCTAGGCGATATGTGAGACTCAAGTGCTGAAGATGGTTGATTTTTGTGCTTGAGTTGCTTCCTCCATTACTAA CAGCAGTGATATAAGCGGAA
Downstream 100 bases:
>100_bases AAACAACAATGACTAAAATTAATCATTATTTTCATCTTATTACTCTTTTTTTATGCACTTTTTTTACTGTATCTGCCCAT GGGGCAAATCGATTAGAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MTELTFFLNNEDDTIAVGQQLARYIKAPLTLYLTGDLGAGKTTLSRGLIQGLGHQGAVKSPTYTLVEPYELNGVEIYHFD LYRLNDPEELEFMGIRDYFSDKSLCIVEWPDKGEGLLPDADIHLHLSYVNSGREIHIQALSKSGEKLLAAIK
Sequences:
>Translated_152_residues MTELTFFLNNEDDTIAVGQQLARYIKAPLTLYLTGDLGAGKTTLSRGLIQGLGHQGAVKSPTYTLVEPYELNGVEIYHFD LYRLNDPEELEFMGIRDYFSDKSLCIVEWPDKGEGLLPDADIHLHLSYVNSGREIHIQALSKSGEKLLAAIK >Mature_151_residues TELTFFLNNEDDTIAVGQQLARYIKAPLTLYLTGDLGAGKTTLSRGLIQGLGHQGAVKSPTYTLVEPYELNGVEIYHFDL YRLNDPEELEFMGIRDYFSDKSLCIVEWPDKGEGLLPDADIHLHLSYVNSGREIHIQALSKSGEKLLAAIK
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=151, Percent_Identity=55.6291390728477, Blast_Score=186, Evalue=6e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 16972; Mature: 16840
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELTFFLNNEDDTIAVGQQLARYIKAPLTLYLTGDLGAGKTTLSRGLIQGLGHQGAVKS CCEEEEEEECCCCEEHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCC PTYTLVEPYELNGVEIYHFDLYRLNDPEELEFMGIRDYFSDKSLCIVEWPDKGEGLLPDA CCEEEECCEECCCEEEEEEEEEECCCCCCEEEEEEHHHCCCCCEEEEECCCCCCCCCCCC DIHLHLSYVNSGREIHIQALSKSGEKLLAAIK CEEEEEEEECCCCEEEEEEECCCCCEEEEECC >Mature Secondary Structure TELTFFLNNEDDTIAVGQQLARYIKAPLTLYLTGDLGAGKTTLSRGLIQGLGHQGAVKS CEEEEEEECCCCEEHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCC PTYTLVEPYELNGVEIYHFDLYRLNDPEELEFMGIRDYFSDKSLCIVEWPDKGEGLLPDA CCEEEECCEECCCEEEEEEEEEECCCCCCEEEEEEHHHCCCCCEEEEECCCCCCCCCCCC DIHLHLSYVNSGREIHIQALSKSGEKLLAAIK CEEEEEEEECCCCEEEEEEECCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]