The gene/protein map for NC_008750 is currently unavailable.
Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

Click here to switch to the map view.

The map label for this gene is 120597473

Identifier: 120597473

GI number: 120597473

Start: 704246

End: 706648

Strand: Direct

Name: 120597473

Synonym: Sputw3181_0642

Alternate gene names: NA

Gene position: 704246-706648 (Clockwise)

Preceding gene: 120597472

Following gene: 120597475

Centisome position: 14.96

GC content: 46.73

Gene sequence:

>2403_bases
ATGAAACCCTATAACTTTGCCTTAGCCTTAATTCTTTTAGGCTTACCTGTTATGAGTGTCGCGGCTAGCGAACCTAGCAC
TAAGATCATTAAACAGAGCCAAGAGGCTAAAGGGTTTCTTAACCTTTACTACGAAACGTCTCAGGGACAGTTATACCTTG
AAGTCGATCGTCTCAATCAGCCCTTCTTATTAGTCACTAGCCTCCCTGAGGGCGTTGGTTCAAATGATATAGGCTTAGAT
CGCGGTCAGCTTGGTCAAACCCGTTTGGTGCAGTTTGAGCGGCAAGGCCCCTACATAATACTTAAGCAACTCAATACCCA
ATATCGTGCTAATACCCTCGATATAGCAGAGCAGAGGGCGGTTAAAGAAGCCTTTGCGGACTCAGTGTTATGGCAAGGGA
AGGTCATTGAGGGTAAACCTGATTTTGTGGCGATAAATAATCTCGTTCTCAATGATTTACATGGCGTATCTTCGGTGTTG
AAGCAAACATCACAGGGGGATTATCAGCTCGATTTGAGTCGCTCAGCCATCTTACCTGCTGGAGTCAAATCCTTTGAAAG
AAATGCCGATGTTGATGTCCAGCTTACGTTTCATAATGCTGTTGCAGGGAAAGAGGTTGCTAAGGTCACTCCCGATGGCA
CTCTGATGTCAGTTAGGATGCGTTACTCTTTCGTTGAACTCCCCGATGAGGGTTATCAACCAAGGGCTTATCACCCGATG
AGTGGTTATTTATCCGATGAATATCAGGATTATGCGACCGATTTTGATCAACCTCTCGTACAGCGATTTATGTTAAGGCA
CCGTTTGCAGAAACTGACGCCAGGCCCTTTACCAAGCAAAGTGGTTAAGCCGATAGTGTATTATCTTGATCCCGGTGTAC
CTGAGCCTATTCGTTCTGCCTTACTTGATGGTGCCAGATGGTGGGAGAGTGCATTTACCCGAGCGGGTTTTATCGATGGC
TTTCAAGTGAAGTTACTGCCAAAGGATGCCGATCCACAGGATATTCGTTACAACATGATCCAATGGGTGCACAGAGCAAC
TCGGGGCTGGTCCTATGGCGCGGCGTTAACCGATCCGCGCACGGGTGAAATTATTAAAGGTCAAGTTACGCTGGGTAGCT
TGCGCGTTCGTCAGGATTATCTCATTGCCAAAGGGTTAACCGCAGCTTGGCGGGATAGGGTCGCGGCAGAACAAGCTGCC
ACAGAGTTATCTTTAGCGCGTCTTCGACAATTGGCGGCCCATGAAGTGGGTCACACCTTGGGGCTAGATCATAACTTTGC
AGCTTCGACCAATCAGGATGCCTCCGTGATGGATTACCCTCATCCTAAGATCCAACTAAAGGGCAATGATATTGATATCT
CAGCCCCTTATACGACTGGGATTGGCCCTTGGGATTATTTTGCAATTACCTATGGTTACAGTGATGAAGGGGATGCTATT
GCACAAAAAAATCTCCAAACTCAGTTATTAGCGGAGGTCGCGAAAAAAGGGCTACGTTATATCGGTGAGAGCGATTCACG
CCAAAAGGATGCTAGCCAAGCCTATGCAAGCCTGTGGGATAGTGGGGAAGATCCTATTGCTCAACTGGTGATGCTCGATA
AAATTCGTACCAAAGCCATTGAAGGTTTTTCCAGTGCAGCGCTACATCCTAGTGAACCGCTAGGGGAATTAGCCGATGCC
TTTGCGCCTATTTATTTGCTAACGCGTTACCAAATTGATGCAGTTGCTAAGTTTATTGGTGGCACTGACTACAATTATCA
GTCCATTGGTGAAGGCAGTCGCTGGAGTTATATCGCTCCACAGTTACAGCTAACGGCATTAGATACATTATTAAAAACCT
TAGATGCAACTAGTTTAACTGTACCTCCGCTTTTGCTCGATAGCTTAGTACCTAAGGCGGGGAATTATCGCACTACTCGC
GAATCCTTTGATTCGGGTCTCGGTGCAATAAGTGATCCTTTAGCTATGGCAGAGGGATTTAGTCGCCATACGGTTAGTTT
GTTATTGATGCCGAAGCGTTTAAACCGTGTGAGCCAAGCATCGATGGCGGATAATGAACAGCTTTCAGTAGCCAGTTTAT
TGGATAAACTATTTGCGGCCACGCTGTACCAAGAAAATCAGCTTGGGCTTATCGAGGGTGTATGGATGCGGGTTAATGCC
GTCGTGATTGATGAAGTACTGGCAACGCTGCACGATCCGCACACTTCCCCTGAGGTAAAAGCGGTAATGAACGATCGCGC
TCAGTTTGCGATTAAACAATTAAAAGCTAAGGCAAATCGAGCGAATATGAATCGTGCAGCCCATTATAATTGGCTGCAGC
AGGGATTCAATCAGGGGCTAACCGATGCCAAGGCCAAGCTCATTGCTAAGCCGTTAATATTACCGCCAGGCGCACCGATT
TAA

Upstream 100 bases:

>100_bases
ACTGGATCCAGCACAAGAACCAGCATAGTTGATTTTTGCTTGGGGCCAGTGATGGCCTCGCAAGGCATACGCCCTGCAGC
CAGCACTATTAGGAGGAAGC

Downstream 100 bases:

>100_bases
CTTCAAGATAGTGTTGAAGTAGGCGCGATTAGGCGCCTATTTCTTTTGGATTTTTGGGATAAAAGTGATCAGCTTGACGC
TCAAGATGAGTAAAGCGACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 800; Mature: 800

Protein sequence:

>800_residues
MKPYNFALALILLGLPVMSVAASEPSTKIIKQSQEAKGFLNLYYETSQGQLYLEVDRLNQPFLLVTSLPEGVGSNDIGLD
RGQLGQTRLVQFERQGPYIILKQLNTQYRANTLDIAEQRAVKEAFADSVLWQGKVIEGKPDFVAINNLVLNDLHGVSSVL
KQTSQGDYQLDLSRSAILPAGVKSFERNADVDVQLTFHNAVAGKEVAKVTPDGTLMSVRMRYSFVELPDEGYQPRAYHPM
SGYLSDEYQDYATDFDQPLVQRFMLRHRLQKLTPGPLPSKVVKPIVYYLDPGVPEPIRSALLDGARWWESAFTRAGFIDG
FQVKLLPKDADPQDIRYNMIQWVHRATRGWSYGAALTDPRTGEIIKGQVTLGSLRVRQDYLIAKGLTAAWRDRVAAEQAA
TELSLARLRQLAAHEVGHTLGLDHNFAASTNQDASVMDYPHPKIQLKGNDIDISAPYTTGIGPWDYFAITYGYSDEGDAI
AQKNLQTQLLAEVAKKGLRYIGESDSRQKDASQAYASLWDSGEDPIAQLVMLDKIRTKAIEGFSSAALHPSEPLGELADA
FAPIYLLTRYQIDAVAKFIGGTDYNYQSIGEGSRWSYIAPQLQLTALDTLLKTLDATSLTVPPLLLDSLVPKAGNYRTTR
ESFDSGLGAISDPLAMAEGFSRHTVSLLLMPKRLNRVSQASMADNEQLSVASLLDKLFAATLYQENQLGLIEGVWMRVNA
VVIDEVLATLHDPHTSPEVKAVMNDRAQFAIKQLKAKANRANMNRAAHYNWLQQGFNQGLTDAKAKLIAKPLILPPGAPI

Sequences:

>Translated_800_residues
MKPYNFALALILLGLPVMSVAASEPSTKIIKQSQEAKGFLNLYYETSQGQLYLEVDRLNQPFLLVTSLPEGVGSNDIGLD
RGQLGQTRLVQFERQGPYIILKQLNTQYRANTLDIAEQRAVKEAFADSVLWQGKVIEGKPDFVAINNLVLNDLHGVSSVL
KQTSQGDYQLDLSRSAILPAGVKSFERNADVDVQLTFHNAVAGKEVAKVTPDGTLMSVRMRYSFVELPDEGYQPRAYHPM
SGYLSDEYQDYATDFDQPLVQRFMLRHRLQKLTPGPLPSKVVKPIVYYLDPGVPEPIRSALLDGARWWESAFTRAGFIDG
FQVKLLPKDADPQDIRYNMIQWVHRATRGWSYGAALTDPRTGEIIKGQVTLGSLRVRQDYLIAKGLTAAWRDRVAAEQAA
TELSLARLRQLAAHEVGHTLGLDHNFAASTNQDASVMDYPHPKIQLKGNDIDISAPYTTGIGPWDYFAITYGYSDEGDAI
AQKNLQTQLLAEVAKKGLRYIGESDSRQKDASQAYASLWDSGEDPIAQLVMLDKIRTKAIEGFSSAALHPSEPLGELADA
FAPIYLLTRYQIDAVAKFIGGTDYNYQSIGEGSRWSYIAPQLQLTALDTLLKTLDATSLTVPPLLLDSLVPKAGNYRTTR
ESFDSGLGAISDPLAMAEGFSRHTVSLLLMPKRLNRVSQASMADNEQLSVASLLDKLFAATLYQENQLGLIEGVWMRVNA
VVIDEVLATLHDPHTSPEVKAVMNDRAQFAIKQLKAKANRANMNRAAHYNWLQQGFNQGLTDAKAKLIAKPLILPPGAPI
>Mature_800_residues
MKPYNFALALILLGLPVMSVAASEPSTKIIKQSQEAKGFLNLYYETSQGQLYLEVDRLNQPFLLVTSLPEGVGSNDIGLD
RGQLGQTRLVQFERQGPYIILKQLNTQYRANTLDIAEQRAVKEAFADSVLWQGKVIEGKPDFVAINNLVLNDLHGVSSVL
KQTSQGDYQLDLSRSAILPAGVKSFERNADVDVQLTFHNAVAGKEVAKVTPDGTLMSVRMRYSFVELPDEGYQPRAYHPM
SGYLSDEYQDYATDFDQPLVQRFMLRHRLQKLTPGPLPSKVVKPIVYYLDPGVPEPIRSALLDGARWWESAFTRAGFIDG
FQVKLLPKDADPQDIRYNMIQWVHRATRGWSYGAALTDPRTGEIIKGQVTLGSLRVRQDYLIAKGLTAAWRDRVAAEQAA
TELSLARLRQLAAHEVGHTLGLDHNFAASTNQDASVMDYPHPKIQLKGNDIDISAPYTTGIGPWDYFAITYGYSDEGDAI
AQKNLQTQLLAEVAKKGLRYIGESDSRQKDASQAYASLWDSGEDPIAQLVMLDKIRTKAIEGFSSAALHPSEPLGELADA
FAPIYLLTRYQIDAVAKFIGGTDYNYQSIGEGSRWSYIAPQLQLTALDTLLKTLDATSLTVPPLLLDSLVPKAGNYRTTR
ESFDSGLGAISDPLAMAEGFSRHTVSLLLMPKRLNRVSQASMADNEQLSVASLLDKLFAATLYQENQLGLIEGVWMRVNA
VVIDEVLATLHDPHTSPEVKAVMNDRAQFAIKQLKAKANRANMNRAAHYNWLQQGFNQGLTDAKAKLIAKPLILPPGAPI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 88469; Mature: 88469

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPYNFALALILLGLPVMSVAASEPSTKIIKQSQEAKGFLNLYYETSQGQLYLEVDRLNQ
CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHCCCEEEEEEECCCCEEEEEEECCCC
PFLLVTSLPEGVGSNDIGLDRGQLGQTRLVQFERQGPYIILKQLNTQYRANTLDIAEQRA
CEEEEEECCCCCCCCCCCCCCCCCCCHHHEEEECCCCEEEEEECCCHHCCCHHHHHHHHH
VKEAFADSVLWQGKVIEGKPDFVAINNLVLNDLHGVSSVLKQTSQGDYQLDLSRSAILPA
HHHHHHHHHHCCCEEECCCCCEEEECHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCH
GVKSFERNADVDVQLTFHNAVAGKEVAKVTPDGTLMSVRMRYSFVELPDEGYQPRAYHPM
HHHHHHCCCCEEEEEEECCCCCCCHHEEECCCCCEEEEEEEEEEEECCCCCCCCCCCCCC
SGYLSDEYQDYATDFDQPLVQRFMLRHRLQKLTPGPLPSKVVKPIVYYLDPGVPEPIRSA
CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHH
LLDGARWWESAFTRAGFIDGFQVKLLPKDADPQDIRYNMIQWVHRATRGWSYGAALTDPR
HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
TGEIIKGQVTLGSLRVRQDYLIAKGLTAAWRDRVAAEQAATELSLARLRQLAAHEVGHTL
CCCEEEEEEEECCEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLDHNFAASTNQDASVMDYPHPKIQLKGNDIDISAPYTTGIGPWDYFAITYGYSDEGDAI
CCCCCCCCCCCCCCCEEECCCCEEEECCCEEEEECCCCCCCCCCCEEEEEECCCCCCCHH
AQKNLQTQLLAEVAKKGLRYIGESDSRQKDASQAYASLWDSGEDPIAQLVMLDKIRTKAI
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
EGFSSAALHPSEPLGELADAFAPIYLLTRYQIDAVAKFIGGTDYNYQSIGEGSRWSYIAP
CCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCEEECC
QLQLTALDTLLKTLDATSLTVPPLLLDSLVPKAGNYRTTRESFDSGLGAISDPLAMAEGF
CHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCHHHHHCCC
SRHTVSLLLMPKRLNRVSQASMADNEQLSVASLLDKLFAATLYQENQLGLIEGVWMRVNA
CCCEEEEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
VVIDEVLATLHDPHTSPEVKAVMNDRAQFAIKQLKAKANRANMNRAAHYNWLQQGFNQGL
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
TDAKAKLIAKPLILPPGAPI
HHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKPYNFALALILLGLPVMSVAASEPSTKIIKQSQEAKGFLNLYYETSQGQLYLEVDRLNQ
CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHCCCEEEEEEECCCCEEEEEEECCCC
PFLLVTSLPEGVGSNDIGLDRGQLGQTRLVQFERQGPYIILKQLNTQYRANTLDIAEQRA
CEEEEEECCCCCCCCCCCCCCCCCCCHHHEEEECCCCEEEEEECCCHHCCCHHHHHHHHH
VKEAFADSVLWQGKVIEGKPDFVAINNLVLNDLHGVSSVLKQTSQGDYQLDLSRSAILPA
HHHHHHHHHHCCCEEECCCCCEEEECHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCH
GVKSFERNADVDVQLTFHNAVAGKEVAKVTPDGTLMSVRMRYSFVELPDEGYQPRAYHPM
HHHHHHCCCCEEEEEEECCCCCCCHHEEECCCCCEEEEEEEEEEEECCCCCCCCCCCCCC
SGYLSDEYQDYATDFDQPLVQRFMLRHRLQKLTPGPLPSKVVKPIVYYLDPGVPEPIRSA
CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHH
LLDGARWWESAFTRAGFIDGFQVKLLPKDADPQDIRYNMIQWVHRATRGWSYGAALTDPR
HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
TGEIIKGQVTLGSLRVRQDYLIAKGLTAAWRDRVAAEQAATELSLARLRQLAAHEVGHTL
CCCEEEEEEEECCEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLDHNFAASTNQDASVMDYPHPKIQLKGNDIDISAPYTTGIGPWDYFAITYGYSDEGDAI
CCCCCCCCCCCCCCCEEECCCCEEEECCCEEEEECCCCCCCCCCCEEEEEECCCCCCCHH
AQKNLQTQLLAEVAKKGLRYIGESDSRQKDASQAYASLWDSGEDPIAQLVMLDKIRTKAI
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
EGFSSAALHPSEPLGELADAFAPIYLLTRYQIDAVAKFIGGTDYNYQSIGEGSRWSYIAP
CCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCEEECC
QLQLTALDTLLKTLDATSLTVPPLLLDSLVPKAGNYRTTRESFDSGLGAISDPLAMAEGF
CHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCHHHHHCCC
SRHTVSLLLMPKRLNRVSQASMADNEQLSVASLLDKLFAATLYQENQLGLIEGVWMRVNA
CCCEEEEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
VVIDEVLATLHDPHTSPEVKAVMNDRAQFAIKQLKAKANRANMNRAAHYNWLQQGFNQGL
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
TDAKAKLIAKPLILPPGAPI
HHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA