The gene/protein map for NC_008750 is currently unavailable.
Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597461

Identifier: 120597461

GI number: 120597461

Start: 686843

End: 688033

Strand: Direct

Name: 120597461

Synonym: Sputw3181_0630

Alternate gene names: NA

Gene position: 686843-688033 (Clockwise)

Preceding gene: 120597460

Following gene: 120597462

Centisome position: 14.59

GC content: 43.07

Gene sequence:

>1191_bases
ATGACAGTTTTTAACACCCAAGTTTCTTTGGTGGCATTAGCCTGCGCGTTTGCTTCACCTTCGTTGTTTGCCGCTGATTC
TAGCTTGACCAACCCTAATATTAGCGCGGTATTAAATGGTTATTACCAAACGGGCGAACGGCCTTTATCTGAAACCTCTG
AAGGTTTTGGTCTAGGTGAAACTGAATTAGCCATGAGTGCCAATATTGATGATATGTTCTATGGCAAGGTGACTGCCGTT
GTTGAAATCCATGATGGTGAGAGTGAGCTCAACCTTGAAGAAGCCTTTATCCAGACGATGGCGATGCCAGGGGGATTTTC
TATTCGTGGTGGTCGTTTTTTATCGGATATTGGCTACCTTAATAACCAACACTTACATACTGATTCTTTCACCGATCGTC
CTATCGCCTACCGTGCCTTTTTAGGTGGTCACTACTTTGATGATGGTGTGCGCTTAAACTTTGTTGCTCCAACCGATCTT
TATTGGACTATGGGTGTAGAAGCCTTTAAAGGAGAAAGTTTACGGGCAGCCGATGAGCATGGTGAGCGTGAATTTGAAAA
TGTCGGGGTTTACACTTTATACACCAAAATCGGTGGTGACATTGGCGATAACAGCTCATGGCAGGCAGGTTTAAGTTACT
TGCGTAACGAAAATGGTCAAGTGACCGCCCATGAGGAAGGTGAAGAAGATGAAGATGAACATGAACATGAACATGAAGAA
GGACATGATCATAGCCATGCGGCATCTTATACGGGTAAAAATACCTATGGGGCTGATTTTGTTTATAAGTGGGCACCTAA
CGGTAACTACAAATACCAAAATTTAACCTTGAGCGGTGAATATTTCCGTGTGACGGATTTTACGCCTGTAGATTTGCATC
CAGAAGATGCTCCGAGCAAGGATTATCATCAAGGTTGGTATTTGAGTAGTGTGTACCAATTTACACCAAGTTGGTCTGCT
GGAGTGCGTTATGGTGAAGTTGATACTCAAGAACTCCATGGTGATCATTTTCATGCACAAAAGTTGAAGGAATCAGAGGT
CACACTGGCATGGCATTCGAGCCATTTCTCGACGGTTCGTTTTCAGTATACTAATCAAAAAGGGACGAATTTTGATGGCT
TTGAAGACGATAACATCTTTACTATTCAGTATATTATGACGTTGGGGGCTCACGGTGCGCATCAATTCTAA

Upstream 100 bases:

>100_bases
GCGCTCCACCTGTTTTACTCTAAATCAACTTACATATTTTAACTTATTGTATTTCTTGATGGTTTTCACCATCGAGCGTT
TGTTGTATTTTGGAGATATT

Downstream 100 bases:

>100_bases
ATTAGTGAAATTGGCTGCAGTAGCACTCTCTGCAGCTTATATGGGGTTGGCCCATGCTGAGCTGAATGTGTTTGCCTGTG
AACCTGAGTATGCGGCCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 395

Protein sequence:

>396_residues
MTVFNTQVSLVALACAFASPSLFAADSSLTNPNISAVLNGYYQTGERPLSETSEGFGLGETELAMSANIDDMFYGKVTAV
VEIHDGESELNLEEAFIQTMAMPGGFSIRGGRFLSDIGYLNNQHLHTDSFTDRPIAYRAFLGGHYFDDGVRLNFVAPTDL
YWTMGVEAFKGESLRAADEHGEREFENVGVYTLYTKIGGDIGDNSSWQAGLSYLRNENGQVTAHEEGEEDEDEHEHEHEE
GHDHSHAASYTGKNTYGADFVYKWAPNGNYKYQNLTLSGEYFRVTDFTPVDLHPEDAPSKDYHQGWYLSSVYQFTPSWSA
GVRYGEVDTQELHGDHFHAQKLKESEVTLAWHSSHFSTVRFQYTNQKGTNFDGFEDDNIFTIQYIMTLGAHGAHQF

Sequences:

>Translated_396_residues
MTVFNTQVSLVALACAFASPSLFAADSSLTNPNISAVLNGYYQTGERPLSETSEGFGLGETELAMSANIDDMFYGKVTAV
VEIHDGESELNLEEAFIQTMAMPGGFSIRGGRFLSDIGYLNNQHLHTDSFTDRPIAYRAFLGGHYFDDGVRLNFVAPTDL
YWTMGVEAFKGESLRAADEHGEREFENVGVYTLYTKIGGDIGDNSSWQAGLSYLRNENGQVTAHEEGEEDEDEHEHEHEE
GHDHSHAASYTGKNTYGADFVYKWAPNGNYKYQNLTLSGEYFRVTDFTPVDLHPEDAPSKDYHQGWYLSSVYQFTPSWSA
GVRYGEVDTQELHGDHFHAQKLKESEVTLAWHSSHFSTVRFQYTNQKGTNFDGFEDDNIFTIQYIMTLGAHGAHQF
>Mature_395_residues
TVFNTQVSLVALACAFASPSLFAADSSLTNPNISAVLNGYYQTGERPLSETSEGFGLGETELAMSANIDDMFYGKVTAVV
EIHDGESELNLEEAFIQTMAMPGGFSIRGGRFLSDIGYLNNQHLHTDSFTDRPIAYRAFLGGHYFDDGVRLNFVAPTDLY
WTMGVEAFKGESLRAADEHGEREFENVGVYTLYTKIGGDIGDNSSWQAGLSYLRNENGQVTAHEEGEEDEDEHEHEHEEG
HDHSHAASYTGKNTYGADFVYKWAPNGNYKYQNLTLSGEYFRVTDFTPVDLHPEDAPSKDYHQGWYLSSVYQFTPSWSAG
VRYGEVDTQELHGDHFHAQKLKESEVTLAWHSSHFSTVRFQYTNQKGTNFDGFEDDNIFTIQYIMTLGAHGAHQF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44382; Mature: 44250

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVFNTQVSLVALACAFASPSLFAADSSLTNPNISAVLNGYYQTGERPLSETSEGFGLGE
CEEECCHHHHHHHHHHHCCCCEEECCCCCCCCCHHHEEEHHHHCCCCCCHHCCCCCCCCC
TELAMSANIDDMFYGKVTAVVEIHDGESELNLEEAFIQTMAMPGGFSIRGGRFLSDIGYL
HHEEEECCCCCEEECEEEEEEEEECCCCCCCHHHHHHHHHCCCCCCEECCCCHHHHHHCC
NNQHLHTDSFTDRPIAYRAFLGGHYFDDGVRLNFVAPTDLYWTMGVEAFKGESLRAADEH
CCCEEECCCCCCCCEEEEEECCCEEECCCEEEEEECCCCEEEECCCHHHCCCCCCCHHHC
GEREFENVGVYTLYTKIGGDIGDNSSWQAGLSYLRNENGQVTAHEEGEEDEDEHEHEHEE
CCHHHHHCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHC
GHDHSHAASYTGKNTYGADFVYKWAPNGNYKYQNLTLSGEYFRVTDFTPVDLHPEDAPSK
CCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCEEEEECCCCCCCCCCCCCCC
DYHQGWYLSSVYQFTPSWSAGVRYGEVDTQELHGDHFHAQKLKESEVTLAWHSSHFSTVR
CCCCCEEEEHHEEECCCHHHCEEECCCCHHHHCCCCHHHHHHCCCCEEEEEECCCCEEEE
FQYTNQKGTNFDGFEDDNIFTIQYIMTLGAHGAHQF
EEEECCCCCCCCCCCCCCEEEEEEEEHHCCCCCCCC
>Mature Secondary Structure 
TVFNTQVSLVALACAFASPSLFAADSSLTNPNISAVLNGYYQTGERPLSETSEGFGLGE
EEECCHHHHHHHHHHHCCCCEEECCCCCCCCCHHHEEEHHHHCCCCCCHHCCCCCCCCC
TELAMSANIDDMFYGKVTAVVEIHDGESELNLEEAFIQTMAMPGGFSIRGGRFLSDIGYL
HHEEEECCCCCEEECEEEEEEEEECCCCCCCHHHHHHHHHCCCCCCEECCCCHHHHHHCC
NNQHLHTDSFTDRPIAYRAFLGGHYFDDGVRLNFVAPTDLYWTMGVEAFKGESLRAADEH
CCCEEECCCCCCCCEEEEEECCCEEECCCEEEEEECCCCEEEECCCHHHCCCCCCCHHHC
GEREFENVGVYTLYTKIGGDIGDNSSWQAGLSYLRNENGQVTAHEEGEEDEDEHEHEHEE
CCHHHHHCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHC
GHDHSHAASYTGKNTYGADFVYKWAPNGNYKYQNLTLSGEYFRVTDFTPVDLHPEDAPSK
CCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCEEEEECCCCCCCCCCCCCCC
DYHQGWYLSSVYQFTPSWSAGVRYGEVDTQELHGDHFHAQKLKESEVTLAWHSSHFSTVR
CCCCCEEEEHHEEECCCHHHCEEECCCCHHHHCCCCHHHHHHCCCCEEEEEECCCCEEEE
FQYTNQKGTNFDGFEDDNIFTIQYIMTLGAHGAHQF
EEEECCCCCCCCCCCCCCEEEEEEEEHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]