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The map label for this gene is degS [C]

Identifier: 120597106

GI number: 120597106

Start: 301016

End: 302236

Strand: Direct

Name: degS [C]

Synonym: Sputw3181_0275

Alternate gene names: 120597106

Gene position: 301016-302236 (Clockwise)

Preceding gene: 120597105

Following gene: 120597107

Centisome position: 6.39

GC content: 44.47

Gene sequence:

>1221_bases
ATGCGATTTCTCTCCAGTGTGCTTATTGTTCTGTTCTGTTTTCATCTTAGTGGCTGCGCGAATACCAAATTAAATGCAAA
TAAATTGCCTAAGGGTGTGGTACTGAATAAGTCCATTACGCTCCCTGTGGATGTGAGTGTTGCCTATTATTTGCCCCATT
CGCAGTTAAATAACCGTTTTTATTTAGAGAAATGGAATATTTGGGTCGATCCAGGAAAATCACTCAGTGATGGTGTGAAG
GATGGTTTTGGTGCTTATTTTTCAAATGCTAAGCTGTTAGACCGCACGCAAGCGAATCAATATGGGTTATTGATCGATAT
CGATCCCGAGTGGAAATTTGAATCGGGCAAAGCAGAAATGATCATGAGTTATCGGGTATTTAATGGGTCCGATAAGCCTA
TTCGAGAGGGACAAAAATCCTTTAAGACAGATATTGGTTATCTTGGGGATGGTTTAGGGCTTTATAACGCATCATTGCGA
GCGACTCAGTTAGTGATTGTCGATGTGCTAAATGCGTTAACGCCTTCTGCAAGTAACTACCCTGCGCAGTATGCAATGAA
AGATGTATCGGCGAATTTACTCGCAAATATGAAAAAACCAGTCAGTACCGGGACGGGGTTTTATATTAATCCGCAGGGAC
AAATTGTTACTGCGGCCCATGTACTCAAAAATTGCATGGTGACACAGGTGAATGTTGGCGATAAATCCTTTGATGCGGTC
GTAGAGGCTAGCTCGACCCTATTAGATTTAGCTGTTGTCAGTACGGGCACACCAGTGGAGCAATACTTGCCATTGCGTAA
AGGTACAGAGATTTTTCTTGGTGAGGCCATTACCAATGTTGGTTATCCCTTACAGGGATTATTGGCGGCTTCACCTAATT
TAACGCGAGGCAATATTAGTTCGCGCGAGGCATTAAAAGGCGCGGTTGGACAGTTCCAGTTTTCGGCACCGATCCAACCT
GGTTCTAGTGGCGGCCCAGTGGTCTCTGACGGCGGGGAGTTATTAGGTATCACCGTCAGTACGTTAAATGTGACGAGTCT
GCGTGAATCGGGCGCGCTACCGCAGAATGTTAACTTTGCCCTCGATGCGAAATATGCTGCCCGCTTTTTAGATAAACACC
ACATTAGTTATCAGTCGGTAGAGCCCAATATGAAGGGTGATATTCGAACGGCAAATGCGGCTGCGCTTGGTGCTGTAGTA
CAACTAAATTGCTATCAATAA

Upstream 100 bases:

>100_bases
TAGAATCTTTGGCTTAATGCAACTTAGATTGCATCCTCCATAGTCTGTACGGTTCGTTTACGCTGTATAGTGCTATTTGC
ATTGATATTAAGGATAACCG

Downstream 100 bases:

>100_bases
GGATGTTTCCAATGCCATTTATGCTTCGTATTTTAATGCTGGGTTTGTTGCTAATCAGCCCATTCGTTAAGGCGCAAACA
ACGGTACTTCCACCAGTGTT

Product: peptidase S1 and S6, chymotrypsin/Hap

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MRFLSSVLIVLFCFHLSGCANTKLNANKLPKGVVLNKSITLPVDVSVAYYLPHSQLNNRFYLEKWNIWVDPGKSLSDGVK
DGFGAYFSNAKLLDRTQANQYGLLIDIDPEWKFESGKAEMIMSYRVFNGSDKPIREGQKSFKTDIGYLGDGLGLYNASLR
ATQLVIVDVLNALTPSASNYPAQYAMKDVSANLLANMKKPVSTGTGFYINPQGQIVTAAHVLKNCMVTQVNVGDKSFDAV
VEASSTLLDLAVVSTGTPVEQYLPLRKGTEIFLGEAITNVGYPLQGLLAASPNLTRGNISSREALKGAVGQFQFSAPIQP
GSSGGPVVSDGGELLGITVSTLNVTSLRESGALPQNVNFALDAKYAARFLDKHHISYQSVEPNMKGDIRTANAAALGAVV
QLNCYQ

Sequences:

>Translated_406_residues
MRFLSSVLIVLFCFHLSGCANTKLNANKLPKGVVLNKSITLPVDVSVAYYLPHSQLNNRFYLEKWNIWVDPGKSLSDGVK
DGFGAYFSNAKLLDRTQANQYGLLIDIDPEWKFESGKAEMIMSYRVFNGSDKPIREGQKSFKTDIGYLGDGLGLYNASLR
ATQLVIVDVLNALTPSASNYPAQYAMKDVSANLLANMKKPVSTGTGFYINPQGQIVTAAHVLKNCMVTQVNVGDKSFDAV
VEASSTLLDLAVVSTGTPVEQYLPLRKGTEIFLGEAITNVGYPLQGLLAASPNLTRGNISSREALKGAVGQFQFSAPIQP
GSSGGPVVSDGGELLGITVSTLNVTSLRESGALPQNVNFALDAKYAARFLDKHHISYQSVEPNMKGDIRTANAAALGAVV
QLNCYQ
>Mature_406_residues
MRFLSSVLIVLFCFHLSGCANTKLNANKLPKGVVLNKSITLPVDVSVAYYLPHSQLNNRFYLEKWNIWVDPGKSLSDGVK
DGFGAYFSNAKLLDRTQANQYGLLIDIDPEWKFESGKAEMIMSYRVFNGSDKPIREGQKSFKTDIGYLGDGLGLYNASLR
ATQLVIVDVLNALTPSASNYPAQYAMKDVSANLLANMKKPVSTGTGFYINPQGQIVTAAHVLKNCMVTQVNVGDKSFDAV
VEASSTLLDLAVVSTGTPVEQYLPLRKGTEIFLGEAITNVGYPLQGLLAASPNLTRGNISSREALKGAVGQFQFSAPIQP
GSSGGPVVSDGGELLGITVSTLNVTSLRESGALPQNVNFALDAKYAARFLDKHHISYQSVEPNMKGDIRTANAAALGAVV
QLNCYQ

Specific function: Unknown

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S1B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009003
- InterPro:   IPR001254
- InterPro:   IPR001940 [H]

Pfam domain/function: PF00089 Trypsin [H]

EC number: 3.4.21.- [C]

Molecular weight: Translated: 43729; Mature: 43729

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFLSSVLIVLFCFHLSGCANTKLNANKLPKGVVLNKSITLPVDVSVAYYLPHSQLNNRF
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCEEEEEEEEEEEEEECHHHCCCEE
YLEKWNIWVDPGKSLSDGVKDGFGAYFSNAKLLDRTQANQYGLLIDIDPEWKFESGKAEM
EEEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCEEEEECCCCCCCCCCCEEE
IMSYRVFNGSDKPIREGQKSFKTDIGYLGDGLGLYNASLRATQLVIVDVLNALTPSASNY
EEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHCCCCCCC
PAQYAMKDVSANLLANMKKPVSTGTGFYINPQGQIVTAAHVLKNCMVTQVNVGDKSFDAV
CHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEHHHHHHHHCEEEEEECCCCHHHHH
VEASSTLLDLAVVSTGTPVEQYLPLRKGTEIFLGEAITNVGYPLQGLLAASPNLTRGNIS
HHHHHHEEEEEEECCCCCHHHHCCCCCCCEEEEHHHHHHCCCCHHHHEECCCCCCCCCCC
SREALKGAVGQFQFSAPIQPGSSGGPVVSDGGELLGITVSTLNVTSLRESGALPQNVNFA
HHHHHHHHHCCEEEECCCCCCCCCCCEEECCCCEEEEEEEEEEEEHHHHCCCCCCCCCEE
LDAKYAARFLDKHHISYQSVEPNMKGDIRTANAAALGAVVQLNCYQ
EEHHHHHHHHHHHCCCEECCCCCCCCCCEECCHHHEEEEEEEEECC
>Mature Secondary Structure
MRFLSSVLIVLFCFHLSGCANTKLNANKLPKGVVLNKSITLPVDVSVAYYLPHSQLNNRF
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCEEEEEEEEEEEEEECHHHCCCEE
YLEKWNIWVDPGKSLSDGVKDGFGAYFSNAKLLDRTQANQYGLLIDIDPEWKFESGKAEM
EEEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCEEEEECCCCCCCCCCCEEE
IMSYRVFNGSDKPIREGQKSFKTDIGYLGDGLGLYNASLRATQLVIVDVLNALTPSASNY
EEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHCCCCCCC
PAQYAMKDVSANLLANMKKPVSTGTGFYINPQGQIVTAAHVLKNCMVTQVNVGDKSFDAV
CHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEHHHHHHHHCEEEEEECCCCHHHHH
VEASSTLLDLAVVSTGTPVEQYLPLRKGTEIFLGEAITNVGYPLQGLLAASPNLTRGNIS
HHHHHHEEEEEEECCCCCHHHHCCCCCCCEEEEHHHHHHCCCCHHHHEECCCCCCCCCCC
SREALKGAVGQFQFSAPIQPGSSGGPVVSDGGELLGITVSTLNVTSLRESGALPQNVNFA
HHHHHHHHHCCEEEECCCCCCCCCCCEEECCCCEEEEEEEEEEEEHHHHCCCCCCCCCEE
LDAKYAARFLDKHHISYQSVEPNMKGDIRTANAAALGAVVQLNCYQ
EEHHHHHHHHHHHCCCEECCCCCCCCCCEECCHHHEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Serine endopeptidases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]