| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
Click here to switch to the map view.
The map label for this gene is katG
Identifier: 120597100
GI number: 120597100
Start: 294658
End: 296844
Strand: Direct
Name: katG
Synonym: Sputw3181_0269
Alternate gene names: 120597100
Gene position: 294658-296844 (Clockwise)
Preceding gene: 120597098
Following gene: 120597103
Centisome position: 6.26
GC content: 46.91
Gene sequence:
>2187_bases ATGGATAAGACTCACAGCTCTCAAGGTAAATGCCCAGTAATGCATGGTGGTAATACCTCCGTCACAACCAATAATATGGA CTGGTGGCCTAAGGCATTAAATCTCGATATTTTGCATCAGCACGACAAAAAAACGGATCCAATGGATCCTACTTTTAATT ACAGCGAAGCATTTAAAACGCTCGATCTTGCGGCGGTAAAACAAGATTTATATGCCTTAATGACAGATAGCCAAGACTGG TGGCCAGCGGACTGGGGACACTACGGCGGATTAATGATCCGTATGGCGTGGCATTCTGCGGGTACTTACCGTATTGCCGA TGGCCGTGGTGGTGCAGGTACGGGTAATCAAAGGTTTGCTCCACTTAATAGCTGGCCCGATAACGCTAACCTCGACAAGG CTCGCCGTTTACTTTGGCCGATCAAGAAGAAATACGGCAATAAGCTGTCTTGGGCTGATTTGATCATACTTGCAGGTAAT GTTGCCTATGAGTCTATGGGTTTGAAAACATATGGTTTTGCAGGTGGCCGTGCCGATATTTGGCATCCAGAGAAAGACAT TTACTGGGGCTCAGAAAAACAATGGCTTGCACCGAGCGATAATCCCAACAGCCGTTATTCTGGGGAGCGCGATCTCGAAA ATCCATTGGCCGCTGTGATGATGGGGCTAATTTATGTGAATCCTGAAGGCGTAGATGGTAATCCTGATCCTCTTCGAACC GCACAAGATATAAGAATAACCTTCGCTCGTATGGCGATGGATGATGAAGAAACGGTTGCCCTGACCGCGGGCGGACATAC TGTGGGTAAATGCCATGGTAATGGTAAGGCGCAGAATCTTGGTCCCGAGCCCGAGGCTGAGGATGTTGAAGCCCAAGGTT TAGGTTGGCTTAATAAGCACGGTCGAGGCGTTGGCCGTAATACTGTCACTAGCGGTATTGAAGGGGCTTGGACCACCCAT CCGACCCAATGGGACAACGGCTATTTCTCATTGTTACTTGGTTATGATTGGGAACTGAAAAAGAGCCCTGCAGGTGCGTG GCAATGGGAACCCATTAATATCAAAGAAGAAGATAAACCTGTCGATGTTGAAGATCCGACGATTCGCCACAATCCAATAA TGACAGATGCCGACATGGCGATGAAAATGGATCCTGAATATCGGAAAATTTCTGAGAAGTTCTATAAAGATCCTGCTTAT TTCTCTGAAGTCTTTGCCCGTGCTTGGTTCAAATTGACCCACCGCGATTTAGGTCCTAAAAGCCGTTATCTCGGCCCAGA AGTGCCTGCAGAAGATTTAATTTGGCAGGACCCGATTCCACAGGTGGATTACCGCCTCTCTGATGATGACATTACCGCAT TAAAAGCGAAAATTTTGGCATCAGGATTGAGTATTGCTGAGCTTGTAACAACCGCTTGGGATAGCGCACGCACTTTCCGC GGCTCTGATTATCGCGGTGGTGCCAATGGTGCCCGCATTCGTCTCGCACCACAAAAGGATTGGGAAGGTAATGAACCCGT CCGTTTGCAAAAAGTACTCAAAGTGCTAACCGATATTCAGACTGGTTTGAGTCAAAAAGTCAGTATTGCCGACTTAATTG TATTGGGTGGAACCGCAGCCGTAGAAAAAGCGGCCCAAGATGCAGGGGTGAATATTCGAGTACCATTCGCTTCTGGCCGT GGTGATGCTTCACAGGAGATGACGGATATAGAATCATTTGCCGTGCTTGAGCCCTTACACGATGCCTATCGCAACTGGCA GAAAAAGGATTATGTTGTTCAACCTGAAGAACTTATGTTAGATCGCACTCAGCTTATGGGACTCACAGCCCACGAAATGA CAGTGTTGATTGGTGGCATGAGGGTATTAGGTGCCAACTATGCAGGTAGCGCGCATGGTGTGTTTACGGATCGTGTGGGT GTACTCAGTAATGACTTTTTTGTTAATTTGACTGACATGTCTTACAACTGGAAACCTGCTGGCAATAATCTGTACCAGAT TATTGAGCGTAAAACCGGAACAGTGAAATGGACTGCTACCCGAGTCGATCTTGTATTTGGTTCTAATTCGGTGCTGAGAT CCTACGCTGAAATTTATGCTCAAGACGATGCCAAAGAGAAGTTTGTGCATGACTTTGTGAATGCATGGACCAAGGTGATG AATGCCGACAGATTTGACCTCGCTTAA
Upstream 100 bases:
>100_bases TAAAGTCGCTTTAGGGGGTGGCAGAAAGTGATTAGTCTAGATTACACAAAAATGATTCAGGCTATACGCCCTTCGTTCGT CATCAATAAAGGAAGATCTC
Downstream 100 bases:
>100_bases TGGCTGAGTATTGAGATAAAACAAACAAGGTGCAGTTGAGCTGCACCTTGTTTTTTATGTCAAACTTAGCTTAATGCCCG ACTCTATCTATGACTTTAAT
Product: catalase/peroxidase HPI
Products: NA
Alternate protein names: CP; Peroxidase/catalase
Number of amino acids: Translated: 728; Mature: 728
Protein sequence:
>728_residues MDKTHSSQGKCPVMHGGNTSVTTNNMDWWPKALNLDILHQHDKKTDPMDPTFNYSEAFKTLDLAAVKQDLYALMTDSQDW WPADWGHYGGLMIRMAWHSAGTYRIADGRGGAGTGNQRFAPLNSWPDNANLDKARRLLWPIKKKYGNKLSWADLIILAGN VAYESMGLKTYGFAGGRADIWHPEKDIYWGSEKQWLAPSDNPNSRYSGERDLENPLAAVMMGLIYVNPEGVDGNPDPLRT AQDIRITFARMAMDDEETVALTAGGHTVGKCHGNGKAQNLGPEPEAEDVEAQGLGWLNKHGRGVGRNTVTSGIEGAWTTH PTQWDNGYFSLLLGYDWELKKSPAGAWQWEPINIKEEDKPVDVEDPTIRHNPIMTDADMAMKMDPEYRKISEKFYKDPAY FSEVFARAWFKLTHRDLGPKSRYLGPEVPAEDLIWQDPIPQVDYRLSDDDITALKAKILASGLSIAELVTTAWDSARTFR GSDYRGGANGARIRLAPQKDWEGNEPVRLQKVLKVLTDIQTGLSQKVSIADLIVLGGTAAVEKAAQDAGVNIRVPFASGR GDASQEMTDIESFAVLEPLHDAYRNWQKKDYVVQPEELMLDRTQLMGLTAHEMTVLIGGMRVLGANYAGSAHGVFTDRVG VLSNDFFVNLTDMSYNWKPAGNNLYQIIERKTGTVKWTATRVDLVFGSNSVLRSYAEIYAQDDAKEKFVHDFVNAWTKVM NADRFDLA
Sequences:
>Translated_728_residues MDKTHSSQGKCPVMHGGNTSVTTNNMDWWPKALNLDILHQHDKKTDPMDPTFNYSEAFKTLDLAAVKQDLYALMTDSQDW WPADWGHYGGLMIRMAWHSAGTYRIADGRGGAGTGNQRFAPLNSWPDNANLDKARRLLWPIKKKYGNKLSWADLIILAGN VAYESMGLKTYGFAGGRADIWHPEKDIYWGSEKQWLAPSDNPNSRYSGERDLENPLAAVMMGLIYVNPEGVDGNPDPLRT AQDIRITFARMAMDDEETVALTAGGHTVGKCHGNGKAQNLGPEPEAEDVEAQGLGWLNKHGRGVGRNTVTSGIEGAWTTH PTQWDNGYFSLLLGYDWELKKSPAGAWQWEPINIKEEDKPVDVEDPTIRHNPIMTDADMAMKMDPEYRKISEKFYKDPAY FSEVFARAWFKLTHRDLGPKSRYLGPEVPAEDLIWQDPIPQVDYRLSDDDITALKAKILASGLSIAELVTTAWDSARTFR GSDYRGGANGARIRLAPQKDWEGNEPVRLQKVLKVLTDIQTGLSQKVSIADLIVLGGTAAVEKAAQDAGVNIRVPFASGR GDASQEMTDIESFAVLEPLHDAYRNWQKKDYVVQPEELMLDRTQLMGLTAHEMTVLIGGMRVLGANYAGSAHGVFTDRVG VLSNDFFVNLTDMSYNWKPAGNNLYQIIERKTGTVKWTATRVDLVFGSNSVLRSYAEIYAQDDAKEKFVHDFVNAWTKVM NADRFDLA >Mature_728_residues MDKTHSSQGKCPVMHGGNTSVTTNNMDWWPKALNLDILHQHDKKTDPMDPTFNYSEAFKTLDLAAVKQDLYALMTDSQDW WPADWGHYGGLMIRMAWHSAGTYRIADGRGGAGTGNQRFAPLNSWPDNANLDKARRLLWPIKKKYGNKLSWADLIILAGN VAYESMGLKTYGFAGGRADIWHPEKDIYWGSEKQWLAPSDNPNSRYSGERDLENPLAAVMMGLIYVNPEGVDGNPDPLRT AQDIRITFARMAMDDEETVALTAGGHTVGKCHGNGKAQNLGPEPEAEDVEAQGLGWLNKHGRGVGRNTVTSGIEGAWTTH PTQWDNGYFSLLLGYDWELKKSPAGAWQWEPINIKEEDKPVDVEDPTIRHNPIMTDADMAMKMDPEYRKISEKFYKDPAY FSEVFARAWFKLTHRDLGPKSRYLGPEVPAEDLIWQDPIPQVDYRLSDDDITALKAKILASGLSIAELVTTAWDSARTFR GSDYRGGANGARIRLAPQKDWEGNEPVRLQKVLKVLTDIQTGLSQKVSIADLIVLGGTAAVEKAAQDAGVNIRVPFASGR GDASQEMTDIESFAVLEPLHDAYRNWQKKDYVVQPEELMLDRTQLMGLTAHEMTVLIGGMRVLGANYAGSAHGVFTDRVG VLSNDFFVNLTDMSYNWKPAGNNLYQIIERKTGTVKWTATRVDLVFGSNSVLRSYAEIYAQDDAKEKFVHDFVNAWTKVM NADRFDLA
Specific function: Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
COG id: COG0376
COG function: function code P; Catalase (peroxidase I)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peroxidase family. Peroxidase/catalase subfamily
Homologues:
Organism=Escherichia coli, GI1790378, Length=727, Percent_Identity=56.9463548830811, Blast_Score=810, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KATG_SHEPC (A4Y2G4)
Other databases:
- EMBL: CP000681 - RefSeq: YP_001181946.1 - ProteinModelPortal: A4Y2G4 - SMR: A4Y2G4 - STRING: A4Y2G4 - PeroxiBase: 3615 - GeneID: 5081399 - GenomeReviews: CP000681_GR - KEGG: spc:Sputcn32_0415 - eggNOG: COG0376 - HOGENOM: HBG285610 - OMA: WPNALNL - PhylomeDB: A4Y2G4 - ProtClustDB: PRK15061 - HAMAP: MF_01961 - InterPro: IPR000763 - InterPro: IPR010255 - InterPro: IPR002016 - InterPro: IPR019794 - PRINTS: PR00460 - PRINTS: PR00458 - TIGRFAMs: TIGR00198
Pfam domain/function: PF00141 peroxidase; SSF48113 Peroxidase_super
EC number: =1.11.1.6; =1.11.1.7
Molecular weight: Translated: 81303; Mature: 81303
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: PS00435 PEROXIDASE_1; PS00436 PEROXIDASE_2; PS50873 PEROXIDASE_4
Important sites: ACT_SITE 98-98
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKTHSSQGKCPVMHGGNTSVTTNNMDWWPKALNLDILHQHDKKTDPMDPTFNYSEAFKT CCCCCCCCCCCCEEECCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHH LDLAAVKQDLYALMTDSQDWWPADWGHYGGLMIRMAWHSAGTYRIADGRGGAGTGNQRFA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCC PLNSWPDNANLDKARRLLWPIKKKYGNKLSWADLIILAGNVAYESMGLKTYGFAGGRADI CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHCCCEEECCCCCCCCC WHPEKDIYWGSEKQWLAPSDNPNSRYSGERDLENPLAAVMMGLIYVNPEGVDGNPDPLRT CCCCCCCEECCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHEEEECCCCCCCCCCCCCC AQDIRITFARMAMDDEETVALTAGGHTVGKCHGNGKAQNLGPEPEAEDVEAQGLGWLNKH HHHHEEEEEEHHCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHC GRGVGRNTVTSGIEGAWTTHPTQWDNGYFSLLLGYDWELKKSPAGAWQWEPINIKEEDKP CCCCCCHHHHCCCCCCCCCCCCCCCCCEEEEEEECCEEECCCCCCCEECCCCCCCCCCCC VDVEDPTIRHNPIMTDADMAMKMDPEYRKISEKFYKDPAYFSEVFARAWFKLTHRDLGPK CCCCCCCCCCCCCCCCCCHHEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC SRYLGPEVPAEDLIWQDPIPQVDYRLSDDDITALKAKILASGLSIAELVTTAWDSARTFR CCCCCCCCCHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC GSDYRGGANGARIRLAPQKDWEGNEPVRLQKVLKVLTDIQTGLSQKVSIADLIVLGGTAA CCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHH VEKAAQDAGVNIRVPFASGRGDASQEMTDIESFAVLEPLHDAYRNWQKKDYVVQPEELML HHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHH DRTQLMGLTAHEMTVLIGGMRVLGANYAGSAHGVFTDRVGVLSNDFFVNLTDMSYNWKPA HHHHHHCCCHHHHHHHHCCHHEECCCCCCCCCCEECCCCCEECCCEEEEEECCCEEEECC GNNLYQIIERKTGTVKWTATRVDLVFGSNSVLRSYAEIYAQDDAKEKFVHDFVNAWTKVM CCHHHHHHHCCCCEEEEEEEEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH NADRFDLA CCCCCCCC >Mature Secondary Structure MDKTHSSQGKCPVMHGGNTSVTTNNMDWWPKALNLDILHQHDKKTDPMDPTFNYSEAFKT CCCCCCCCCCCCEEECCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHH LDLAAVKQDLYALMTDSQDWWPADWGHYGGLMIRMAWHSAGTYRIADGRGGAGTGNQRFA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCC PLNSWPDNANLDKARRLLWPIKKKYGNKLSWADLIILAGNVAYESMGLKTYGFAGGRADI CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHCCCEEECCCCCCCCC WHPEKDIYWGSEKQWLAPSDNPNSRYSGERDLENPLAAVMMGLIYVNPEGVDGNPDPLRT CCCCCCCEECCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHEEEECCCCCCCCCCCCCC AQDIRITFARMAMDDEETVALTAGGHTVGKCHGNGKAQNLGPEPEAEDVEAQGLGWLNKH HHHHEEEEEEHHCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHC GRGVGRNTVTSGIEGAWTTHPTQWDNGYFSLLLGYDWELKKSPAGAWQWEPINIKEEDKP CCCCCCHHHHCCCCCCCCCCCCCCCCCEEEEEEECCEEECCCCCCCEECCCCCCCCCCCC VDVEDPTIRHNPIMTDADMAMKMDPEYRKISEKFYKDPAYFSEVFARAWFKLTHRDLGPK CCCCCCCCCCCCCCCCCCHHEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC SRYLGPEVPAEDLIWQDPIPQVDYRLSDDDITALKAKILASGLSIAELVTTAWDSARTFR CCCCCCCCCHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC GSDYRGGANGARIRLAPQKDWEGNEPVRLQKVLKVLTDIQTGLSQKVSIADLIVLGGTAA CCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHH VEKAAQDAGVNIRVPFASGRGDASQEMTDIESFAVLEPLHDAYRNWQKKDYVVQPEELML HHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHH DRTQLMGLTAHEMTVLIGGMRVLGANYAGSAHGVFTDRVGVLSNDFFVNLTDMSYNWKPA HHHHHHCCCHHHHHHHHCCHHEECCCCCCCCCCEECCCCCEECCCEEEEEECCCEEEECC GNNLYQIIERKTGTVKWTATRVDLVFGSNSVLRSYAEIYAQDDAKEKFVHDFVNAWTKVM CCHHHHHHHCCCCEEEEEEEEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH NADRFDLA CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA