Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is yqaE [C]

Identifier: 120597085

GI number: 120597085

Start: 277094

End: 277261

Strand: Direct

Name: yqaE [C]

Synonym: Sputw3181_0254

Alternate gene names: 120597085

Gene position: 277094-277261 (Clockwise)

Preceding gene: 120597084

Following gene: 120597087

Centisome position: 5.89

GC content: 40.48

Gene sequence:

>168_bases
ATGGATACAAACAAATTACTTTTAGTTATTATTGCGATCCTCTTACCGCCCGTTGCGGTATTCTTGAAAGCGGGAGCGGG
TAAGGATCTGTTAATTAACATCGTTCTGTGTTTATTTTTCTGGTTTCCCGGTTTATTGCACGCACTGTGGGTTGTTACTA
AGGATTAG

Upstream 100 bases:

>100_bases
CGAACATGAGTCTGCTTTGGGATAAAGTATTTGCAAATCCTGAGTCTTCCTGCGAAGTTAGCTGTGTAATGATTTCCCCT
CTACAGGAGCAAGCTTATCT

Downstream 100 bases:

>100_bases
TGATCCCAATATCCCAATCAAAAAGCGCAACCTATATTTATTGCGCTTTTTGATGGATAAAAATCAGAGCAGTTTAAAAA
GGTAGTGTATAGCCTATGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 55; Mature: 55

Protein sequence:

>55_residues
MDTNKLLLVIIAILLPPVAVFLKAGAGKDLLINIVLCLFFWFPGLLHALWVVTKD

Sequences:

>Translated_55_residues
MDTNKLLLVIIAILLPPVAVFLKAGAGKDLLINIVLCLFFWFPGLLHALWVVTKD
>Mature_55_residues
MDTNKLLLVIIAILLPPVAVFLKAGAGKDLLINIVLCLFFWFPGLLHALWVVTKD

Specific function: Unknown

COG id: COG0401

COG function: function code S; Uncharacterized homolog of Blt101

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6320482, Length=55, Percent_Identity=47.2727272727273, Blast_Score=60, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6089; Mature: 6089

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: PS01309 UPF0057

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTNKLLLVIIAILLPPVAVFLKAGAGKDLLINIVLCLFFWFPGLLHALWVVTKD
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDTNKLLLVIIAILLPPVAVFLKAGAGKDLLINIVLCLFFWFPGLLHALWVVTKD
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA