| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
Click here to switch to the map view.
The map label for this gene is yqaE [C]
Identifier: 120597085
GI number: 120597085
Start: 277094
End: 277261
Strand: Direct
Name: yqaE [C]
Synonym: Sputw3181_0254
Alternate gene names: 120597085
Gene position: 277094-277261 (Clockwise)
Preceding gene: 120597084
Following gene: 120597087
Centisome position: 5.89
GC content: 40.48
Gene sequence:
>168_bases ATGGATACAAACAAATTACTTTTAGTTATTATTGCGATCCTCTTACCGCCCGTTGCGGTATTCTTGAAAGCGGGAGCGGG TAAGGATCTGTTAATTAACATCGTTCTGTGTTTATTTTTCTGGTTTCCCGGTTTATTGCACGCACTGTGGGTTGTTACTA AGGATTAG
Upstream 100 bases:
>100_bases CGAACATGAGTCTGCTTTGGGATAAAGTATTTGCAAATCCTGAGTCTTCCTGCGAAGTTAGCTGTGTAATGATTTCCCCT CTACAGGAGCAAGCTTATCT
Downstream 100 bases:
>100_bases TGATCCCAATATCCCAATCAAAAAGCGCAACCTATATTTATTGCGCTTTTTGATGGATAAAAATCAGAGCAGTTTAAAAA GGTAGTGTATAGCCTATGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 55; Mature: 55
Protein sequence:
>55_residues MDTNKLLLVIIAILLPPVAVFLKAGAGKDLLINIVLCLFFWFPGLLHALWVVTKD
Sequences:
>Translated_55_residues MDTNKLLLVIIAILLPPVAVFLKAGAGKDLLINIVLCLFFWFPGLLHALWVVTKD >Mature_55_residues MDTNKLLLVIIAILLPPVAVFLKAGAGKDLLINIVLCLFFWFPGLLHALWVVTKD
Specific function: Unknown
COG id: COG0401
COG function: function code S; Uncharacterized homolog of Blt101
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6320482, Length=55, Percent_Identity=47.2727272727273, Blast_Score=60, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6089; Mature: 6089
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: PS01309 UPF0057
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTNKLLLVIIAILLPPVAVFLKAGAGKDLLINIVLCLFFWFPGLLHALWVVTKD CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDTNKLLLVIIAILLPPVAVFLKAGAGKDLLINIVLCLFFWFPGLLHALWVVTKD CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA