| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is modB [H]
Identifier: 120597079
GI number: 120597079
Start: 271720
End: 272403
Strand: Direct
Name: modB [H]
Synonym: Sputw3181_0248
Alternate gene names: 120597079
Gene position: 271720-272403 (Clockwise)
Preceding gene: 120597078
Following gene: 120597080
Centisome position: 5.77
GC content: 48.25
Gene sequence:
>684_bases ATGATGGATTGGCAGGCACTTTGGTTATCGGTCAAGCTGAGTGGCATCACTGTTTTAGTGCTTATCCCCTTAGCTATTCT CGCTGGACGGGCATTAGCCTATCGCCAATTTGTCGGCAAATCCTGGGTTGAAGCACTGATCATGGTGCCCTTGGTATTAC CGCCAACAGTGATTGGCTATTACTTGCTGGTGGGGCTAGGTAGTCAAAGTTGGCTCGGACAATGGATTGAACAAGTCATT GGTCAGCAACTCGTGTTTCACTTTTCTGGTCTGGTTATCGCCTCCGTATTAGTTAATATTCCCTTTGCCGTGCAGCCGAT ACAGCGCGCCTTTGAAACTGTACCTAATGATGTTCGCGATGCAGCCGCTTGTTGCGGCATGAGTCGACTTAAAATTTTAC TTAAAATTGAACTGCCTATGGTATGGCCGGGAGTATTGACTGCCTTAGTGCTGTGCTTCTCCCATGTGCTCGGCGAGTTT GGCGTTGTGCTGATGATGGGCGGCAATATTGCTGGCGAGACTAAAACGATTTCGATTGCAATTTATGACAGTGTGCAATC ATTCGATTTTAATGCAGCAGGCACTATGTCATTAGTCTTATTGCTGTTTGCCGTGACGGCCTTAGCACTCACGACCAGTC TATCGCGGCGTTTAGGAGGTCAGCGTGGCGCAAATCATCGCTGA
Upstream 100 bases:
>100_bases CCAAGGCGGGTGAAACAGCCCAGCATTTTTATGATTATTTAAGAGCCGATAGCGCTCGTCGTATTTTGGCCGATTATGGT TTTTCATTACCAGAGCAACC
Downstream 100 bases:
>100_bases TCTGCAGTGTCAGATCCAAAATCATAAACACATTAATCTGAGCGCTGATTTTCGCTGTAAAGCGGGTGAAGTACTTGCTG TGGTAGGGCCATCTGGCGGT
Product: molybdate ABC transporter inner membrane subunit
Products: ADP; phosphate; MoO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MMDWQALWLSVKLSGITVLVLIPLAILAGRALAYRQFVGKSWVEALIMVPLVLPPTVIGYYLLVGLGSQSWLGQWIEQVI GQQLVFHFSGLVIASVLVNIPFAVQPIQRAFETVPNDVRDAAACCGMSRLKILLKIELPMVWPGVLTALVLCFSHVLGEF GVVLMMGGNIAGETKTISIAIYDSVQSFDFNAAGTMSLVLLLFAVTALALTTSLSRRLGGQRGANHR
Sequences:
>Translated_227_residues MMDWQALWLSVKLSGITVLVLIPLAILAGRALAYRQFVGKSWVEALIMVPLVLPPTVIGYYLLVGLGSQSWLGQWIEQVI GQQLVFHFSGLVIASVLVNIPFAVQPIQRAFETVPNDVRDAAACCGMSRLKILLKIELPMVWPGVLTALVLCFSHVLGEF GVVLMMGGNIAGETKTISIAIYDSVQSFDFNAAGTMSLVLLLFAVTALALTTSLSRRLGGQRGANHR >Mature_227_residues MMDWQALWLSVKLSGITVLVLIPLAILAGRALAYRQFVGKSWVEALIMVPLVLPPTVIGYYLLVGLGSQSWLGQWIEQVI GQQLVFHFSGLVIASVLVNIPFAVQPIQRAFETVPNDVRDAAACCGMSRLKILLKIELPMVWPGVLTALVLCFSHVLGEF GVVLMMGGNIAGETKTISIAIYDSVQSFDFNAAGTMSLVLLLFAVTALALTTSLSRRLGGQRGANHR
Specific function: Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4149
COG function: function code P; ABC-type molybdate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786980, Length=185, Percent_Identity=36.2162162162162, Blast_Score=107, Evalue=9e-25, Organism=Escherichia coli, GI1788764, Length=195, Percent_Identity=29.2307692307692, Blast_Score=96, Evalue=1e-21, Organism=Escherichia coli, GI87082099, Length=218, Percent_Identity=27.9816513761468, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1786254, Length=213, Percent_Identity=29.5774647887324, Blast_Score=72, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011867 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24581; Mature: 24581
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMDWQALWLSVKLSGITVLVLIPLAILAGRALAYRQFVGKSWVEALIMVPLVLPPTVIGY CCCHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH YLLVGLGSQSWLGQWIEQVIGQQLVFHFSGLVIASVLVNIPFAVQPIQRAFETVPNDVRD HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHH AAACCGMSRLKILLKIELPMVWPGVLTALVLCFSHVLGEFGVVLMMGGNIAGETKTISIA HHHHHCHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCEEEEEE IYDSVQSFDFNAAGTMSLVLLLFAVTALALTTSLSRRLGGQRGANHR EEECHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MMDWQALWLSVKLSGITVLVLIPLAILAGRALAYRQFVGKSWVEALIMVPLVLPPTVIGY CCCHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH YLLVGLGSQSWLGQWIEQVIGQQLVFHFSGLVIASVLVNIPFAVQPIQRAFETVPNDVRD HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHH AAACCGMSRLKILLKIELPMVWPGVLTALVLCFSHVLGEFGVVLMMGGNIAGETKTISIA HHHHHCHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCEEEEEE IYDSVQSFDFNAAGTMSLVLLLFAVTALALTTSLSRRLGGQRGANHR EEECHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; MoO42- [Periplasm]; H2O [C]
Specific reaction: ATP + MoO42- [Periplasm] + H2O = ADP + phosphate + MoO42- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8384683; 7665518 [H]