| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is yihV [C]
Identifier: 120597068
GI number: 120597068
Start: 260377
End: 261231
Strand: Direct
Name: yihV [C]
Synonym: Sputw3181_0237
Alternate gene names: 120597068
Gene position: 260377-261231 (Clockwise)
Preceding gene: 120597067
Following gene: 120597069
Centisome position: 5.53
GC content: 48.07
Gene sequence:
>855_bases ATGGCGAATATTTTACTGGTTGCAAATCTTAATTGTGATCGAATTTTATTGCTGGATAAACCACTCAAAACAGGAGGACG CTTTCATTATCAAGATGGTGGTCAAAGGCTTGGTGGTGGAGGCGCTAATACTGGGCTTGGACTGGTATGGGCTGGGCATC GAGTGGCGCTGGTCAGTCAAGTCGGGCGCGACGAGATGGGAGATTGGGCCATTGCTGAAGCGAGCACCCAAGGGCTCGAT TGCCGTTTAGTGCAACGAAGATCGGGAAATACCTGTGAAATGCTCCTTGTTATGACTCCTGATGGCGAACGCACGATTAT TCGTCCACAAAGACCTATTTTTGAATTGTCTGTTCCACCTAAGTGGCAGCAGTGGGATGCGTTGTATTTTAATACTTCGG CCGAGGGTACTGTTAGTTGGGCAAAGACAGCGTTAGAGCATTGTCTCGTTGTTGCCCAGTTAGCGAAAGATGATAGACCT AGACCCTGCCATGTACTACTCGCATCGATGAGTGATATGCAAGGGCGTTGTGATAGCGCCTTTTGGGAATATGGCAAAAG CATTGGCGGTGACTCATTACGTTATTTTATTGTGACGGATGGTATTAATGGCGCAAATGTTTATACCAAAGATAAAGTAC AACATGTCCAAGCGGTCCCCGCAAAAGTGGTCGACACAACGGGGGCAGGAGATGCTTATGCCGCCGGATTAATTCACAGC CTGTGTTCCGGACAATCGATCACTGATGCAATGGCTGAGGGCGCTATATGGGCTGCATTTGCGGTAGCAACTGATAGTTC TATCCCTGGGGACGCACTGAAAGGGTATTTAGAGGTTAAGGGCTCCTTGTCATAA
Upstream 100 bases:
>100_bases AAGATCCACAGTGACGGATTGAATTGTACCTATCACTGTTTTGATCTAGATTGGGGCTTGCATTTAGGCGCTTTACTTTA TCGTCCTATGGAGCCTTGTA
Downstream 100 bases:
>100_bases ATGATGCATGGATTGGGATTAGTCATCTTTTTGTCATCTAGGCTTGGTAAATTTGACCACAGTGGCGATTCGCTATTGTC CCTTAACATTTTTCTGTGTT
Product: ribokinase-like domain-containing protein
Products: NA
Alternate protein names: Carbohydrate Kinase; Site-Specific DNA-Methyltransferase; Carbohydrate Kinase PfkB Family; PfkB Family Carbohydrate Kinase; PfkB Domain Protein; Carbohydrate Kinase PfkB
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MANILLVANLNCDRILLLDKPLKTGGRFHYQDGGQRLGGGGANTGLGLVWAGHRVALVSQVGRDEMGDWAIAEASTQGLD CRLVQRRSGNTCEMLLVMTPDGERTIIRPQRPIFELSVPPKWQQWDALYFNTSAEGTVSWAKTALEHCLVVAQLAKDDRP RPCHVLLASMSDMQGRCDSAFWEYGKSIGGDSLRYFIVTDGINGANVYTKDKVQHVQAVPAKVVDTTGAGDAYAAGLIHS LCSGQSITDAMAEGAIWAAFAVATDSSIPGDALKGYLEVKGSLS
Sequences:
>Translated_284_residues MANILLVANLNCDRILLLDKPLKTGGRFHYQDGGQRLGGGGANTGLGLVWAGHRVALVSQVGRDEMGDWAIAEASTQGLD CRLVQRRSGNTCEMLLVMTPDGERTIIRPQRPIFELSVPPKWQQWDALYFNTSAEGTVSWAKTALEHCLVVAQLAKDDRP RPCHVLLASMSDMQGRCDSAFWEYGKSIGGDSLRYFIVTDGINGANVYTKDKVQHVQAVPAKVVDTTGAGDAYAAGLIHS LCSGQSITDAMAEGAIWAAFAVATDSSIPGDALKGYLEVKGSLS >Mature_283_residues ANILLVANLNCDRILLLDKPLKTGGRFHYQDGGQRLGGGGANTGLGLVWAGHRVALVSQVGRDEMGDWAIAEASTQGLDC RLVQRRSGNTCEMLLVMTPDGERTIIRPQRPIFELSVPPKWQQWDALYFNTSAEGTVSWAKTALEHCLVVAQLAKDDRPR PCHVLLASMSDMQGRCDSAFWEYGKSIGGDSLRYFIVTDGINGANVYTKDKVQHVQAVPAKVVDTTGAGDAYAAGLIHSL CSGQSITDAMAEGAIWAAFAVATDSSIPGDALKGYLEVKGSLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30483; Mature: 30352
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANILLVANLNCDRILLLDKPLKTGGRFHYQDGGQRLGGGGANTGLGLVWAGHRVALVSQ CCCEEEEEECCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCEEEHHH VGRDEMGDWAIAEASTQGLDCRLVQRRSGNTCEMLLVMTPDGERTIIRPQRPIFELSVPP HCCCCCCCEEEECCCCCCCEEEEEECCCCCCEEEEEEECCCCCEEEECCCCCEEEECCCC KWQQWDALYFNTSAEGTVSWAKTALEHCLVVAQLAKDDRPRPCHVLLASMSDMQGRCDSA CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEEHHHHHCCCHHHH FWEYGKSIGGDSLRYFIVTDGINGANVYTKDKVQHVQAVPAKVVDTTGAGDAYAAGLIHS HHHHHHCCCCCCEEEEEEECCCCCCCCEEHHHHHHHHHCCHHEEECCCCCHHHHHHHHHH LCSGQSITDAMAEGAIWAAFAVATDSSIPGDALKGYLEVKGSLS HHCCCHHHHHHHCCCEEEEEEEECCCCCCHHHHEEEEEEECCCC >Mature Secondary Structure ANILLVANLNCDRILLLDKPLKTGGRFHYQDGGQRLGGGGANTGLGLVWAGHRVALVSQ CCEEEEEECCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCEEEHHH VGRDEMGDWAIAEASTQGLDCRLVQRRSGNTCEMLLVMTPDGERTIIRPQRPIFELSVPP HCCCCCCCEEEECCCCCCCEEEEEECCCCCCEEEEEEECCCCCEEEECCCCCEEEECCCC KWQQWDALYFNTSAEGTVSWAKTALEHCLVVAQLAKDDRPRPCHVLLASMSDMQGRCDSA CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEEHHHHHCCCHHHH FWEYGKSIGGDSLRYFIVTDGINGANVYTKDKVQHVQAVPAKVVDTTGAGDAYAAGLIHS HHHHHHCCCCCCEEEEEEECCCCCCCCEEHHHHHHHHHCCHHEEECCCCCHHHHHHHHHH LCSGQSITDAMAEGAIWAAFAVATDSSIPGDALKGYLEVKGSLS HHCCCHHHHHHHCCCEEEEEEEECCCCCCHHHHEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups; Phosphotransferases with an alcohol group as acceptor [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA