| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is 120596917
Identifier: 120596917
GI number: 120596917
Start: 103372
End: 103518
Strand: Direct
Name: 120596917
Synonym: Sputw3181_0084
Alternate gene names: NA
Gene position: 103372-103518 (Clockwise)
Preceding gene: 120596916
Following gene: 120596920
Centisome position: 2.2
GC content: 50.34
Gene sequence:
>147_bases TTGAAAAACTGGCTGATTATCGTGTTTTGCCTGATTGCCTTGGTCGCTTCGACGCAAACCACTGGACTCGTGCGCTCACT TATCGAATTCTCCGCCTTCGTTGGCGTCCTCTACTGGGCTTGGCGCATAAAACCTACAGCAGAGTAA
Upstream 100 bases:
>100_bases AGCTTAGCTGTTATAGCTATTTGTTATTGAAAATTGATATTGGCTGAGCTTTTAGTTCTAAACAATAATGAGCATCCCCT AAGTTTGTAGGAAGATACCA
Downstream 100 bases:
>100_bases GTTGTTGAACTAACTCTTACTTATTGAAAATACAGTATATACACTAAAGACGTTATGCCAATTGCTGCCCATAGCATCAC CCCAAGCAACAAAGGTTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 48; Mature: 48
Protein sequence:
>48_residues MKNWLIIVFCLIALVASTQTTGLVRSLIEFSAFVGVLYWAWRIKPTAE
Sequences:
>Translated_48_residues MKNWLIIVFCLIALVASTQTTGLVRSLIEFSAFVGVLYWAWRIKPTAE >Mature_48_residues MKNWLIIVFCLIALVASTQTTGLVRSLIEFSAFVGVLYWAWRIKPTAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5458; Mature: 5458
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNWLIIVFCLIALVASTQTTGLVRSLIEFSAFVGVLYWAWRIKPTAE CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKNWLIIVFCLIALVASTQTTGLVRSLIEFSAFVGVLYWAWRIKPTAE CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA