| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119947252
Identifier: 119947252
GI number: 119947252
Start: 4463533
End: 4463988
Strand: Direct
Name: 119947252
Synonym: Ping_3650
Alternate gene names: NA
Gene position: 4463533-4463988 (Clockwise)
Preceding gene: 119947248
Following gene: 119947254
Centisome position: 97.89
GC content: 40.35
Gene sequence:
>456_bases ATGAGTATTGAATTAGACCAAAATCTACAAAAAGACTGTTATAAATTAGCTGAGAGTGAGGATTATTTATGGTTATTACT CAATAACCGCTATTTCCTATGGATGATTATTGTCCCTAATACCGCCCAGACGGAGCTCTACAGGTTAACGGAACAAGAGC AGCAAAAACTGACTCAACAAAGCAATATGATCAGTGAATTTATCACCCAAAACTTTGCTTGTGATAAATTAAATGTGGCC AGTATCGGCAATATAGTCGCGCAAATTCATCTTCATATCATTGCCCGTACCACGACAGATCTATGCTGGCCCGGGGTTGT TTGGGGTACTGAACATAAAGCGCCGTATCCGATTGATGCCGTATTAGAGATTCAGACAAAGCTGCAACAATTTTGTCTGG ACAAAAATATCACCGGCTATCACTTTAGCGCGCCGGAGATTAAAGCCGTTCAATAA
Upstream 100 bases:
>100_bases ATCAACGGGATCCGGGTATACTTGAAAAATAATAAGGCTTATAAATTAAGCTGGCACTAATTTGACAACAATCGATGAGA AAATGTTCAAGAGGAAGAAA
Downstream 100 bases:
>100_bases AATCTAAATCTGTTTTTGTTCCCTGTAAAAAATAGAGTGGCGGTGCATATTTGCGAGCCATTTTTATTGCCTGTTCATTG CTTAAGTGGCTTTTAATACA
Product: histidine triad (HIT) protein
Products: NA
Alternate protein names: Histidine Triad Family Protein; HIT Family Hydrolase; Histidine Triad Domain Protein; HIT Hydrolase; Histidine Triad; Pectate Lyase/Amb Allergen; Diadenosine Tetraphosphate Hydrolase; HIT Family Protein; Diadenosine Tetraphosphate Hydrolase-Like Protein
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MSIELDQNLQKDCYKLAESEDYLWLLLNNRYFLWMIIVPNTAQTELYRLTEQEQQKLTQQSNMISEFITQNFACDKLNVA SIGNIVAQIHLHIIARTTTDLCWPGVVWGTEHKAPYPIDAVLEIQTKLQQFCLDKNITGYHFSAPEIKAVQ
Sequences:
>Translated_151_residues MSIELDQNLQKDCYKLAESEDYLWLLLNNRYFLWMIIVPNTAQTELYRLTEQEQQKLTQQSNMISEFITQNFACDKLNVA SIGNIVAQIHLHIIARTTTDLCWPGVVWGTEHKAPYPIDAVLEIQTKLQQFCLDKNITGYHFSAPEIKAVQ >Mature_150_residues SIELDQNLQKDCYKLAESEDYLWLLLNNRYFLWMIIVPNTAQTELYRLTEQEQQKLTQQSNMISEFITQNFACDKLNVAS IGNIVAQIHLHIIARTTTDLCWPGVVWGTEHKAPYPIDAVLEIQTKLQQFCLDKNITGYHFSAPEIKAVQ
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17505; Mature: 17374
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIELDQNLQKDCYKLAESEDYLWLLLNNRYFLWMIIVPNTAQTELYRLTEQEQQKLTQQ CCCCCCCHHHHHHHHHHCCCCEEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHH SNMISEFITQNFACDKLNVASIGNIVAQIHLHIIARTTTDLCWPGVVWGTEHKAPYPIDA HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCEECCCCCCCCCHHH VLEIQTKLQQFCLDKNITGYHFSAPEIKAVQ HHHHHHHHHHHHHCCCCCCEEECCCCEEECC >Mature Secondary Structure SIELDQNLQKDCYKLAESEDYLWLLLNNRYFLWMIIVPNTAQTELYRLTEQEQQKLTQQ CCCCCCHHHHHHHHHHCCCCEEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHH SNMISEFITQNFACDKLNVASIGNIVAQIHLHIIARTTTDLCWPGVVWGTEHKAPYPIDA HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCEECCCCCCCCCHHH VLEIQTKLQQFCLDKNITGYHFSAPEIKAVQ HHHHHHHHHHHHHCCCCCCEEECCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA