| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119947240
Identifier: 119947240
GI number: 119947240
Start: 4452627
End: 4453133
Strand: Reverse
Name: 119947240
Synonym: Ping_3638
Alternate gene names: NA
Gene position: 4453133-4452627 (Counterclockwise)
Preceding gene: 119947241
Following gene: 119947239
Centisome position: 97.67
GC content: 45.56
Gene sequence:
>507_bases ATGTCTATTCATCCCCTTTTTACACTCAGCGTTGAAAACAGTACTGCCAGCATAATTTTAACCCCTTGCCCGGGCACAAA AGAGGCCGATTTGGTCAATTCACTTCAACAAATAAAAGACGCTGGTGCGGTGGCATTATTAACCTTTATGACCCAAAGAG AACTGGATAAAAACCAGTTATCTGATATTGGGAAAGCTAGCGAGGCACAGGGACTGCAGTGGTTTCATCTGCCTATTGTT GATGACGAAGCGCCTGGAAACCCGTTTTTGAAGGCTTGGAAAAGTGCCGGCCCGATTGTGCATGATTTAATTGCACAGGG TAAAACCATTGCAGTGCATTGCAAAGGGGGCTCCGGACGTACGGGCCTGATTAGTGCGCAAATCCTTATTGAACGCGGCG AGTCCTTAGCGCCTCTTATGGCGCGTATTCAGGCTGTTCGGCCTAATGCATTTATGCATTTATGCCATCGTGATTATTTA ACAGATCTGGCAAACAGTTTAAAATAA
Upstream 100 bases:
>100_bases ATAAATAGAGCAAGGTCAGATTTCTGACTCTTAAAGCAGTTCGAGTATAGTCAAAGCAGAGCCTCTTCTGCTTTTTTTAC AATTTTTAACAGGTAACCTT
Downstream 100 bases:
>100_bases GCCATTTATATTTATAATACCAAAAAAATTAATGAAGTGATCAATGATTGCGAAGGAAAAATTAGCACTAATAAGGCGTG AGTTGCATTCGATCGTTATT
Product: phosphatase
Products: NA
Alternate protein names: Phosphatase; Protein Tyrosine Phosphatase; ADP-Ribosyl-(Dinitrogen Reductase) Hydrolase; Phosphatase Family Protein; Protein-Tyrosine Phosphatase; ADP-Ribosyl Glycohydrolase Family Protein; Ducificity Phosphatase Catalytic Domain Protein; Protein Tyrosine Phosphatase Catalytic Region
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MSIHPLFTLSVENSTASIILTPCPGTKEADLVNSLQQIKDAGAVALLTFMTQRELDKNQLSDIGKASEAQGLQWFHLPIV DDEAPGNPFLKAWKSAGPIVHDLIAQGKTIAVHCKGGSGRTGLISAQILIERGESLAPLMARIQAVRPNAFMHLCHRDYL TDLANSLK
Sequences:
>Translated_168_residues MSIHPLFTLSVENSTASIILTPCPGTKEADLVNSLQQIKDAGAVALLTFMTQRELDKNQLSDIGKASEAQGLQWFHLPIV DDEAPGNPFLKAWKSAGPIVHDLIAQGKTIAVHCKGGSGRTGLISAQILIERGESLAPLMARIQAVRPNAFMHLCHRDYL TDLANSLK >Mature_167_residues SIHPLFTLSVENSTASIILTPCPGTKEADLVNSLQQIKDAGAVALLTFMTQRELDKNQLSDIGKASEAQGLQWFHLPIVD DEAPGNPFLKAWKSAGPIVHDLIAQGKTIAVHCKGGSGRTGLISAQILIERGESLAPLMARIQAVRPNAFMHLCHRDYLT DLANSLK
Specific function: Unknown
COG id: COG2453
COG function: function code T; Predicted protein-tyrosine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18149; Mature: 18018
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: PS00383 TYR_PHOSPHATASE_1 ; PS50056 TYR_PHOSPHATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIHPLFTLSVENSTASIILTPCPGTKEADLVNSLQQIKDAGAVALLTFMTQRELDKNQL CCCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHH SDIGKASEAQGLQWFHLPIVDDEAPGNPFLKAWKSAGPIVHDLIAQGKTIAVHCKGGSGR HHHCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHCCCHHHHHHHHCCCEEEEEECCCCCC TGLISAQILIERGESLAPLMARIQAVRPNAFMHLCHRDYLTDLANSLK CCEEEHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SIHPLFTLSVENSTASIILTPCPGTKEADLVNSLQQIKDAGAVALLTFMTQRELDKNQL CCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHH SDIGKASEAQGLQWFHLPIVDDEAPGNPFLKAWKSAGPIVHDLIAQGKTIAVHCKGGSGR HHHCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHCCCHHHHHHHHCCCEEEEEECCCCCC TGLISAQILIERGESLAPLMARIQAVRPNAFMHLCHRDYLTDLANSLK CCEEEHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA