| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is 119947186
Identifier: 119947186
GI number: 119947186
Start: 4399485
End: 4399817
Strand: Reverse
Name: 119947186
Synonym: Ping_3584
Alternate gene names: NA
Gene position: 4399817-4399485 (Counterclockwise)
Preceding gene: 119947187
Following gene: 119947185
Centisome position: 96.5
GC content: 38.44
Gene sequence:
>333_bases GTGCGTGACAATGCGCTGCAACAGAGTTATATAAAACAAGTGAAATTGCTTACCGGCGGTTTGCAGCGTGCCACAGAGCA TGAAGATTTGGATCAAATCAGTAAGTATGAAGCCGTGATTGAAAAATTATTAACCGATTTAGCGGGTAAAGAAATACCGC CGGCACTGCGTCTTGCGCTCAGTAAACTTAAGGTACAGCATGAACAGACCAGTGAAATAATCACCGAAAAATTAAATGAT GTTAAAAGCGCACTCGTTAATCTTAATAAAAGCAAAAAAAGAATGGGTGCTTATAGCCAATCATCAATAACGAATATTAT TGTTAAAGCATAG
Upstream 100 bases:
>100_bases ATCAGTAAAATTTATCAGGCCAGCCGTAATAACGATATTGAAGAAATTAACAAGCTCAAACCGATTATTCAGGACATTAA AGATGGCTGGGATGGATTAA
Downstream 100 bases:
>100_bases GGATTCTGATGGATTTAACGCTCAGGTTGGCGGCACCAGTCAATACAGCTGCAAGTGGCACTAAAAGTGAAAGTAAGCCG TTGCTAAGTGCTTTTACATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MRDNALQQSYIKQVKLLTGGLQRATEHEDLDQISKYEAVIEKLLTDLAGKEIPPALRLALSKLKVQHEQTSEIITEKLND VKSALVNLNKSKKRMGAYSQSSITNIIVKA
Sequences:
>Translated_110_residues MRDNALQQSYIKQVKLLTGGLQRATEHEDLDQISKYEAVIEKLLTDLAGKEIPPALRLALSKLKVQHEQTSEIITEKLND VKSALVNLNKSKKRMGAYSQSSITNIIVKA >Mature_110_residues MRDNALQQSYIKQVKLLTGGLQRATEHEDLDQISKYEAVIEKLLTDLAGKEIPPALRLALSKLKVQHEQTSEIITEKLND VKSALVNLNKSKKRMGAYSQSSITNIIVKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12302; Mature: 12302
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDNALQQSYIKQVKLLTGGLQRATEHEDLDQISKYEAVIEKLLTDLAGKEIPPALRLAL CCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH SKLKVQHEQTSEIITEKLNDVKSALVNLNKSKKRMGAYSQSSITNIIVKA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHCC >Mature Secondary Structure MRDNALQQSYIKQVKLLTGGLQRATEHEDLDQISKYEAVIEKLLTDLAGKEIPPALRLAL CCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH SKLKVQHEQTSEIITEKLNDVKSALVNLNKSKKRMGAYSQSSITNIIVKA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA