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The map label for this gene is flgC [H]

Identifier: 119947179

GI number: 119947179

Start: 4394419

End: 4394847

Strand: Reverse

Name: flgC [H]

Synonym: Ping_3577

Alternate gene names: 119947179

Gene position: 4394847-4394419 (Counterclockwise)

Preceding gene: 119947180

Following gene: 119947178

Centisome position: 96.39

GC content: 41.96

Gene sequence:

>429_bases
ATGTCGTTTCAGCAAATATTTTTAACCGCAGGCTCCGCAATGACAGCTCAGACGGTGAGGTTAAATACTATCTCAAGTAA
TTTGGCTAATGCAGATTCCTTCTCCGGTAATAAAGAGGATGTGTTCAAACCGTTAAAGCCCATTTTTGCGACAATTTATA
ATAATATGAACAACGGCTCAGCGAGTAATATTCGCTCTGCACAGGTTATGGTTGCCGATGTTATTGCAACAGACTCTCTT
ACCCAGCAGCGTCATGAGCCTGAAAATCCACTGGCAAACGCAGAGGGAAATGTTTTTTATTCAGGGATCGATGTCGTTAG
TGAAATGGCCGATATGATGTCTGCGAGCCGCAGCTTTGAAATGAATGTTGAAGTGCTAAATAATGCCAAGTCGATGCAGC
AGTCATTAATCAGCGTGTTGGATATTTAA

Upstream 100 bases:

>100_bases
AGGCCAAATTTGCTGAAAACAATCTGAATTATCAGACCAGCCTGAATTTTTTGAAGATGAAAATTTCAGGTTTAAAATCC
GCGATAGAAGGAAGATAAGA

Downstream 100 bases:

>100_bases
CGTGGCATTATCTGAAAGCAGTGTATTAGGTGCAGATGTCGCTATTACTCAGATGGCCTCGCAAACTAAGACGATTGACG
CTAATCCCAATGATAGTAGT

Product: flagellar basal-body rod protein FlgC

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MSFQQIFLTAGSAMTAQTVRLNTISSNLANADSFSGNKEDVFKPLKPIFATIYNNMNNGSASNIRSAQVMVADVIATDSL
TQQRHEPENPLANAEGNVFYSGIDVVSEMADMMSASRSFEMNVEVLNNAKSMQQSLISVLDI

Sequences:

>Translated_142_residues
MSFQQIFLTAGSAMTAQTVRLNTISSNLANADSFSGNKEDVFKPLKPIFATIYNNMNNGSASNIRSAQVMVADVIATDSL
TQQRHEPENPLANAEGNVFYSGIDVVSEMADMMSASRSFEMNVEVLNNAKSMQQSLISVLDI
>Mature_141_residues
SFQQIFLTAGSAMTAQTVRLNTISSNLANADSFSGNKEDVFKPLKPIFATIYNNMNNGSASNIRSAQVMVADVIATDSLT
QQRHEPENPLANAEGNVFYSGIDVVSEMADMMSASRSFEMNVEVLNNAKSMQQSLISVLDI

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=132, Percent_Identity=46.2121212121212, Blast_Score=102, Evalue=1e-23,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 15419; Mature: 15287

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFQQIFLTAGSAMTAQTVRLNTISSNLANADSFSGNKEDVFKPLKPIFATIYNNMNNGS
CCHHHEEEECCCCHHHHEEEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
ASNIRSAQVMVADVIATDSLTQQRHEPENPLANAEGNVFYSGIDVVSEMADMMSASRSFE
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCE
MNVEVLNNAKSMQQSLISVLDI
EHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SFQQIFLTAGSAMTAQTVRLNTISSNLANADSFSGNKEDVFKPLKPIFATIYNNMNNGS
CHHHEEEECCCCHHHHEEEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
ASNIRSAQVMVADVIATDSLTQQRHEPENPLANAEGNVFYSGIDVVSEMADMMSASRSFE
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCE
MNVEVLNNAKSMQQSLISVLDI
EHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]