| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is pldA [H]
Identifier: 119947095
GI number: 119947095
Start: 4323494
End: 4324351
Strand: Direct
Name: pldA [H]
Synonym: Ping_3493
Alternate gene names: 119947095
Gene position: 4323494-4324351 (Clockwise)
Preceding gene: 119947090
Following gene: 119947099
Centisome position: 94.82
GC content: 39.51
Gene sequence:
>858_bases ATGTATCTATTATTTTTAGTTTTTGTTTTGTTATTTAGCGCGGCCACACGGGCAGAAGAATCTGCCGTTGATCAGCGTAT CGAGCAGGAGAACAAACTCCAGAAGGACCGCTTTTCTATTATCCCCTATAAACCCAATTACCTTTTGCCTTTTACTTTTA ATAATAATATTCAATCTTACGATGCTGATAAGGGTGTTGCCGCATCGGACCGATTACAACCCGTTGAGATAAAATTTCAA CTTAGTTTTAAAACACCTGTCTTAGTGGATATTGCCGACTTACCCCTCACGCTTTATTTTGGTTATACCCAAGTCTCTTT CTGGCAGGCTTATAATAGCGGTAATTCATCCCCGTTTCGCGAAACTAATTATGAACCGGAGATGTTTCTACGGTGGGTAC ATGACACAAAACTAGGAGGAGATTGGCATTTTAAATTAGCAACACTGAACTTAGCCCATCAATCCAATGGGAAAACAGAG CCGGGATCCCGCAGCTGGAATCGTATCGAAAGCAATATTGTCTTGGAAAATGGGAATATCACTCTGGCGTTTAATCCCTG GTTTCGTTTACCAGAAGATGCAAAAAATGATAATAATCCAGATTTATTGGATTATTATGGCCACGGAAAAATTTATGCTC TTTATCAAATAAATAAGCATAACTTTTCAATTACCAGCCGCAATAATATTGAAAGTGGCTTTAGCAAAGGGTCACTGGAG CTCAATTGGAGTGTCCCTCTTCACGGTAGTATTCGCGGTTATTTTCAGGTTTTCTCAGGCTATGGCAACAGCCTGATAGA GTATAATCAATATACCAATACAGTAGGGTTAGGTATCTCATTAACCGACTGGTTATAG
Upstream 100 bases:
>100_bases ACCCCAAACAGTTAAACTCGACAATAATTAGAACTTGCATCTATTATGCTTTAAGTTGCACTAATTAGTTCTTTTAGCAT AATTTATCAAGGAAATGGCT
Downstream 100 bases:
>100_bases GCCACTGAGCGTATTACACTAACTTCCTGAACAAACAGCAGACGTTTCTATATCCTAGATATACGACGTTACAATAGGGG TAGGCATCTCATTGACTGAC
Product: phospholipase A(1)
Products: NA
Alternate protein names: Detergent-resistant phospholipase A; DR-phospholipase A; Outer membrane phospholipase A; OM PLA; Phosphatidylcholine 1-acylhydrolase [H]
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MYLLFLVFVLLFSAATRAEESAVDQRIEQENKLQKDRFSIIPYKPNYLLPFTFNNNIQSYDADKGVAASDRLQPVEIKFQ LSFKTPVLVDIADLPLTLYFGYTQVSFWQAYNSGNSSPFRETNYEPEMFLRWVHDTKLGGDWHFKLATLNLAHQSNGKTE PGSRSWNRIESNIVLENGNITLAFNPWFRLPEDAKNDNNPDLLDYYGHGKIYALYQINKHNFSITSRNNIESGFSKGSLE LNWSVPLHGSIRGYFQVFSGYGNSLIEYNQYTNTVGLGISLTDWL
Sequences:
>Translated_285_residues MYLLFLVFVLLFSAATRAEESAVDQRIEQENKLQKDRFSIIPYKPNYLLPFTFNNNIQSYDADKGVAASDRLQPVEIKFQ LSFKTPVLVDIADLPLTLYFGYTQVSFWQAYNSGNSSPFRETNYEPEMFLRWVHDTKLGGDWHFKLATLNLAHQSNGKTE PGSRSWNRIESNIVLENGNITLAFNPWFRLPEDAKNDNNPDLLDYYGHGKIYALYQINKHNFSITSRNNIESGFSKGSLE LNWSVPLHGSIRGYFQVFSGYGNSLIEYNQYTNTVGLGISLTDWL >Mature_285_residues MYLLFLVFVLLFSAATRAEESAVDQRIEQENKLQKDRFSIIPYKPNYLLPFTFNNNIQSYDADKGVAASDRLQPVEIKFQ LSFKTPVLVDIADLPLTLYFGYTQVSFWQAYNSGNSSPFRETNYEPEMFLRWVHDTKLGGDWHFKLATLNLAHQSNGKTE PGSRSWNRIESNIVLENGNITLAFNPWFRLPEDAKNDNNPDLLDYYGHGKIYALYQINKHNFSITSRNNIESGFSKGSLE LNWSVPLHGSIRGYFQVFSGYGNSLIEYNQYTNTVGLGISLTDWL
Specific function: Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities [H]
COG id: COG2829
COG function: function code M; Outer membrane phospholipase A
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein. Note=One of the very few enzymes located there (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phospholipase A1 family [H]
Homologues:
Organism=Escherichia coli, GI2367300, Length=293, Percent_Identity=35.1535836177474, Blast_Score=159, Evalue=2e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003187 [H]
Pfam domain/function: PF02253 PLA1 [H]
EC number: =3.1.1.32; =3.1.1.4 [H]
Molecular weight: Translated: 32761; Mature: 32761
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLLFLVFVLLFSAATRAEESAVDQRIEQENKLQKDRFSIIPYKPNYLLPFTFNNNIQSY CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEECCCCCCC DADKGVAASDRLQPVEIKFQLSFKTPVLVDIADLPLTLYFGYTQVSFWQAYNSGNSSPFR CCCCCCCCCCCCCEEEEEEEEEECCCEEEEECCCCEEEEECCEEEEEEEHCCCCCCCCCC ETNYEPEMFLRWVHDTKLGGDWHFKLATLNLAHQSNGKTEPGSRSWNRIESNIVLENGNI CCCCCHHHEEEEEHHCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCEECCEEEEECCCE TLAFNPWFRLPEDAKNDNNPDLLDYYGHGKIYALYQINKHNFSITSRNNIESGFSKGSLE EEEECCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEECCEEEEEECCCCCCCCCCCCEE LNWSVPLHGSIRGYFQVFSGYGNSLIEYNQYTNTVGLGISLTDWL EEEECCCCCCHHHHHHHHHCCCCCEEEECCCCCEEECCEEEECCC >Mature Secondary Structure MYLLFLVFVLLFSAATRAEESAVDQRIEQENKLQKDRFSIIPYKPNYLLPFTFNNNIQSY CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEECCCCCCC DADKGVAASDRLQPVEIKFQLSFKTPVLVDIADLPLTLYFGYTQVSFWQAYNSGNSSPFR CCCCCCCCCCCCCEEEEEEEEEECCCEEEEECCCCEEEEECCEEEEEEEHCCCCCCCCCC ETNYEPEMFLRWVHDTKLGGDWHFKLATLNLAHQSNGKTEPGSRSWNRIESNIVLENGNI CCCCCHHHEEEEEHHCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCEECCEEEEECCCE TLAFNPWFRLPEDAKNDNNPDLLDYYGHGKIYALYQINKHNFSITSRNNIESGFSKGSLE EEEECCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEECCEEEEEECCCCCCCCCCCCEE LNWSVPLHGSIRGYFQVFSGYGNSLIEYNQYTNTVGLGISLTDWL EEEECCCCCCHHHHHHHHHCCCCCEEEECCCCCEEECCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8300539 [H]