Click here to switch to the map view.

The map label for this gene is yjeS [H]

Identifier: 119946850

GI number: 119946850

Start: 4003316

End: 4004476

Strand: Direct

Name: yjeS [H]

Synonym: Ping_3244

Alternate gene names: 119946850

Gene position: 4003316-4004476 (Clockwise)

Preceding gene: 119946834

Following gene: 119946851

Centisome position: 87.8

GC content: 43.67

Gene sequence:

>1161_bases
ATGATAAATCAAAAAAATTTAATTGACCCCACTGAAACACTCGATTTATTAAGTTTATCTCAAAATATCAAATTATGGGG
TAAAGAGCTCGGTTTTCAGAAGGTAGGTATCTCAGATATTGATCTAAAAGACCAGGAAAGTAAATTACAGTCGTGGTTGG
ATAACAATTACCACGGCGAAATGGAGTATATGAGCAAGCATGGTATGAAACGTGCCCGCCCTGATGAACTGCTCCCCGGC
ACGTTAAGGGTAATTTCCGTGCGCATGGATTATTTACCGGATAATGCCCAATTTGCCAGTACATTAAAAAACAAAGATAA
CGCTTATATCAGTCGTTATGCACTTGGCCGGGATTACCACAAAGTGCTGCGCAAAAGACTTAAAAAGCTGGGGCAAAAAA
TTGAATTAGAAGTCGGGCAATTGGGTTACCGTCCTTTTGTTGACAGCGCGCCAATATTGGAACGTCCCCTTGCTGCAAAA
GCAGGATTAGGCTGGGTTGGCAAACACTCACTTTTGCTTGATGCCAAGGCTGGCTCCTGGTTTTTTATCGGCGAACTGCT
GGTCGATTTACCTTTACCCGTTGATCAACCCGTCGAAAATAAATGTGGAAAATGTGTTGCCTGTTTGACTATCTGCCCGA
CACAGGCGATCGTTGCACCCTATGTGGTTGATGGACGCCGCTGTATCTCCTACTTGACCATCGAACTGCAGGGGCCCATT
CCGGTTGAATTTCGCAAAGCCATTGGTAACCGTATCTACGGTTGTGATGATTGCCAACTGATTTGTCCCTGGAACCGTTT
TGCCGATACCACCGAGGAAAGTGATTATCAGGTTCGTCAGCAGCTGGAAAACAAATCCTTATTAGAATTATTTAATTGGA
CTGAAGATGAGTTTCTAACCTATAGCGAAGGCTCCCCCATTCGCCGTATTGGTTATCAGCGCTGGCTGCGTAATATAAGC
GTGGCATTAGGTAATGCGCCAGCCAGTGAGGCAATAGTTGATACGTTAAAAAACAAACTCGCTTTAAATCTCTCTGAGAT
GTTAAATGAGCATCTGCAATGGGCACTTGACCAACACCAGGGTCAAATCCCGGTATTTAATGAGCGCCTTAAAAAACGTT
TAATTAATAGCGTTGAAAAAGGTCTGCCCAGAGATGCATAA

Upstream 100 bases:

>100_bases
TTTGATCTGCTGAGCACGATATAAAGAATGTGGTAAACTGCTGGCAGTTTTTATCTGATCGTTAAGCATATCGATCATCC
TCTGAGAGTTAAGTATTAAA

Downstream 100 bases:

>100_bases
TGATTAGGGTTAAATATAAAAAAATACTGTCTAAGTTAACGCGTTAGCGTGCTTCCTATTGACATAAACCTAATTTTCGA
AAAAGCTTGTAGATAACTAT

Product: putative iron-sulfur cluster binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MINQKNLIDPTETLDLLSLSQNIKLWGKELGFQKVGISDIDLKDQESKLQSWLDNNYHGEMEYMSKHGMKRARPDELLPG
TLRVISVRMDYLPDNAQFASTLKNKDNAYISRYALGRDYHKVLRKRLKKLGQKIELEVGQLGYRPFVDSAPILERPLAAK
AGLGWVGKHSLLLDAKAGSWFFIGELLVDLPLPVDQPVENKCGKCVACLTICPTQAIVAPYVVDGRRCISYLTIELQGPI
PVEFRKAIGNRIYGCDDCQLICPWNRFADTTEESDYQVRQQLENKSLLELFNWTEDEFLTYSEGSPIRRIGYQRWLRNIS
VALGNAPASEAIVDTLKNKLALNLSEMLNEHLQWALDQHQGQIPVFNERLKKRLINSVEKGLPRDA

Sequences:

>Translated_386_residues
MINQKNLIDPTETLDLLSLSQNIKLWGKELGFQKVGISDIDLKDQESKLQSWLDNNYHGEMEYMSKHGMKRARPDELLPG
TLRVISVRMDYLPDNAQFASTLKNKDNAYISRYALGRDYHKVLRKRLKKLGQKIELEVGQLGYRPFVDSAPILERPLAAK
AGLGWVGKHSLLLDAKAGSWFFIGELLVDLPLPVDQPVENKCGKCVACLTICPTQAIVAPYVVDGRRCISYLTIELQGPI
PVEFRKAIGNRIYGCDDCQLICPWNRFADTTEESDYQVRQQLENKSLLELFNWTEDEFLTYSEGSPIRRIGYQRWLRNIS
VALGNAPASEAIVDTLKNKLALNLSEMLNEHLQWALDQHQGQIPVFNERLKKRLINSVEKGLPRDA
>Mature_386_residues
MINQKNLIDPTETLDLLSLSQNIKLWGKELGFQKVGISDIDLKDQESKLQSWLDNNYHGEMEYMSKHGMKRARPDELLPG
TLRVISVRMDYLPDNAQFASTLKNKDNAYISRYALGRDYHKVLRKRLKKLGQKIELEVGQLGYRPFVDSAPILERPLAAK
AGLGWVGKHSLLLDAKAGSWFFIGELLVDLPLPVDQPVENKCGKCVACLTICPTQAIVAPYVVDGRRCISYLTIELQGPI
PVEFRKAIGNRIYGCDDCQLICPWNRFADTTEESDYQVRQQLENKSLLELFNWTEDEFLTYSEGSPIRRIGYQRWLRNIS
VALGNAPASEAIVDTLKNKLALNLSEMLNEHLQWALDQHQGQIPVFNERLKKRLINSVEKGLPRDA

Specific function: Unknown

COG id: COG1600

COG function: function code C; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI1790608, Length=385, Percent_Identity=63.6363636363636, Blast_Score=506, Evalue=1e-144,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004453
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR013542
- InterPro:   IPR009051 [H]

Pfam domain/function: PF08331 DUF1730 [H]

EC number: NA

Molecular weight: Translated: 43955; Mature: 43955

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINQKNLIDPTETLDLLSLSQNIKLWGKELGFQKVGISDIDLKDQESKLQSWLDNNYHGE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHCCCCCCH
MEYMSKHGMKRARPDELLPGTLRVISVRMDYLPDNAQFASTLKNKDNAYISRYALGRDYH
HHHHHHCCCCCCCCCCCCCCHHHHEEEHHHCCCCCHHHHHHHHCCCCHHHHHHHHCHHHH
KVLRKRLKKLGQKIELEVGQLGYRPFVDSAPILERPLAAKAGLGWVGKHSLLLDAKAGSW
HHHHHHHHHHCHHEEEEHHHCCCCCCCCCCCHHHCCCHHHCCCCCCCCCEEEEECCCCCE
FFIGELLVDLPLPVDQPVENKCGKCVACLTICPTQAIVAPYVVDGRRCISYLTIELQGPI
EEHHHHHHHCCCCCCCCHHHHHHHEEHHHHHCCHHHHHHHHHHCHHHEEEEEEEEECCCC
PVEFRKAIGNRIYGCDDCQLICPWNRFADTTEESDYQVRQQLENKSLLELFNWTEDEFLT
CHHHHHHHCCCCCCCCCCEEEECCHHHCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCEEE
YSEGSPIRRIGYQRWLRNISVALGNAPASEAIVDTLKNKLALNLSEMLNEHLQWALDQHQ
ECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GQIPVFNERLKKRLINSVEKGLPRDA
CCCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MINQKNLIDPTETLDLLSLSQNIKLWGKELGFQKVGISDIDLKDQESKLQSWLDNNYHGE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHCCCCCCH
MEYMSKHGMKRARPDELLPGTLRVISVRMDYLPDNAQFASTLKNKDNAYISRYALGRDYH
HHHHHHCCCCCCCCCCCCCCHHHHEEEHHHCCCCCHHHHHHHHCCCCHHHHHHHHCHHHH
KVLRKRLKKLGQKIELEVGQLGYRPFVDSAPILERPLAAKAGLGWVGKHSLLLDAKAGSW
HHHHHHHHHHCHHEEEEHHHCCCCCCCCCCCHHHCCCHHHCCCCCCCCCEEEEECCCCCE
FFIGELLVDLPLPVDQPVENKCGKCVACLTICPTQAIVAPYVVDGRRCISYLTIELQGPI
EEHHHHHHHCCCCCCCCHHHHHHHEEHHHHHCCHHHHHHHHHHCHHHEEEEEEEEECCCC
PVEFRKAIGNRIYGCDDCQLICPWNRFADTTEESDYQVRQQLENKSLLELFNWTEDEFLT
CHHHHHHHCCCCCCCCCCEEEECCHHHCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCEEE
YSEGSPIRRIGYQRWLRNISVALGNAPASEAIVDTLKNKLALNLSEMLNEHLQWALDQHQ
ECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GQIPVFNERLKKRLINSVEKGLPRDA
CCCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]