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The map label for this gene is yibP [H]

Identifier: 119946818

GI number: 119946818

Start: 3967122

End: 3968375

Strand: Direct

Name: yibP [H]

Synonym: Ping_3212

Alternate gene names: 119946818

Gene position: 3967122-3968375 (Clockwise)

Preceding gene: 119946817

Following gene: 119946819

Centisome position: 87.01

GC content: 39.31

Gene sequence:

>1254_bases
ATGACCAACACCAACCTTAGCAAAAAAAAGCGCATTTCAGCAGTGTTGGTTAACTGCTTTCTTTTATGCTTTATCCTTTC
AATCCAAAGCAGTTTTGCAGCTGATAAACTTGCGACAATTGAGCTCCAAATAAAAACCGCCAAAGGCGCGCAAAACAAGC
AAACTAAACAACAGAAGTTATTGGAAAAGTTGGTTGCCAATGCTGAAAAAGAGACTGCCATTGCAACGCTTAAAGTACAG
CAGACCAAGGAAACAATACAACTTGAAAACAGCCGCCTTAAACAATTAATCGAACAAACAGCCATACTTGAAGAAGATAA
AATAAAACAACAAAAACTGCTTGAACAGCAATTAATCAGCTCCTACATGACAGGACAAACTGATTTAATAAAACTAATTT
TAAATCAAGAAGATATCAGTAAAATAATTCGTGCAAAAAGTTATTACCAGTACCTTAATAAAGCACGTCTGGAAAGCATT
AACGCACTGTATGAAACACAACAACAATTAGAAAATAACAAGTCTGCGCAAGCCGATTCTTTGCTGGCGTTAACCGGATT
ATATGAGAGACAGAAAGTAAGTGCAGAAGCGTTGCTCGAACAACGCGCGGAGCGAAGCAAAGCGTTAAAAGAGTTAAACC
AAGATTTAAATTATCAGTATGCACTGCTGGCACAACTTGGTGATCAGGCACAAAATTTAAAAGAAAAACTCAGAAAACAA
AGTGAAGCGCGACAAAAACGTGAATTAGCAGCAAAAGCAAAAGCAAAAGCAAAAGCACTTAAAAATAGACAATCCAAATC
AGAAGAGAAAACTAATTCCAACATCGCTAAAGGAAAAGAGGAAACCTATTCCAATATTGCTAAACAATTAGGGCAATTGA
ATTGGCCAATTCAAGGAGAGGTTTTATCCCGGTTTGGCAGTCAGCGTAGTGGACAGGTAACGTGGAAGGGTATCACCATT
GAGGCGAATGAAGGTGAAAAAGTACAGGCTGTCGCAAGCGGGCGAGTTTTATTTGCCGGCTATTTTAAAGGTTATGGCAT
GGTCCTCGCATTAGATCACAGTGATGGTTACATTAGCTTATATGGATACAACCAAACCCTGTTACAGGAAACAGGCGATC
TTGTTCTACAGGGTGATACAATCGCCCTGGCCGGGCACAGTGGTGGACAAGATAATAACAGTCTATATTTTGAATTGAGC
CACAAAGGTACAGCTAAAGATCCCCTGCTCTGGCTTAAAAAGAAACACAACTAG

Upstream 100 bases:

>100_bases
CTATCGACAGCTCAGTATTTAGTTATTTTACTCAACATAAGTGATTAAAGTTGGTAAATTTTCTAAATACTGACGTATCT
CAAATAAGTGTAGGAAATTG

Downstream 100 bases:

>100_bases
TGATAATAAACCCAAATCACAATCACAGGAAACAGTCTAAAAAGGGCGCTTAGCTATAAAATTAAAGCCGCTAAAAATCA
AAAAATAGGGTCAATAGATC

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 416

Protein sequence:

>417_residues
MTNTNLSKKKRISAVLVNCFLLCFILSIQSSFAADKLATIELQIKTAKGAQNKQTKQQKLLEKLVANAEKETAIATLKVQ
QTKETIQLENSRLKQLIEQTAILEEDKIKQQKLLEQQLISSYMTGQTDLIKLILNQEDISKIIRAKSYYQYLNKARLESI
NALYETQQQLENNKSAQADSLLALTGLYERQKVSAEALLEQRAERSKALKELNQDLNYQYALLAQLGDQAQNLKEKLRKQ
SEARQKRELAAKAKAKAKALKNRQSKSEEKTNSNIAKGKEETYSNIAKQLGQLNWPIQGEVLSRFGSQRSGQVTWKGITI
EANEGEKVQAVASGRVLFAGYFKGYGMVLALDHSDGYISLYGYNQTLLQETGDLVLQGDTIALAGHSGGQDNNSLYFELS
HKGTAKDPLLWLKKKHN

Sequences:

>Translated_417_residues
MTNTNLSKKKRISAVLVNCFLLCFILSIQSSFAADKLATIELQIKTAKGAQNKQTKQQKLLEKLVANAEKETAIATLKVQ
QTKETIQLENSRLKQLIEQTAILEEDKIKQQKLLEQQLISSYMTGQTDLIKLILNQEDISKIIRAKSYYQYLNKARLESI
NALYETQQQLENNKSAQADSLLALTGLYERQKVSAEALLEQRAERSKALKELNQDLNYQYALLAQLGDQAQNLKEKLRKQ
SEARQKRELAAKAKAKAKALKNRQSKSEEKTNSNIAKGKEETYSNIAKQLGQLNWPIQGEVLSRFGSQRSGQVTWKGITI
EANEGEKVQAVASGRVLFAGYFKGYGMVLALDHSDGYISLYGYNQTLLQETGDLVLQGDTIALAGHSGGQDNNSLYFELS
HKGTAKDPLLWLKKKHN
>Mature_416_residues
TNTNLSKKKRISAVLVNCFLLCFILSIQSSFAADKLATIELQIKTAKGAQNKQTKQQKLLEKLVANAEKETAIATLKVQQ
TKETIQLENSRLKQLIEQTAILEEDKIKQQKLLEQQLISSYMTGQTDLIKLILNQEDISKIIRAKSYYQYLNKARLESIN
ALYETQQQLENNKSAQADSLLALTGLYERQKVSAEALLEQRAERSKALKELNQDLNYQYALLAQLGDQAQNLKEKLRKQS
EARQKRELAAKAKAKAKALKNRQSKSEEKTNSNIAKGKEETYSNIAKQLGQLNWPIQGEVLSRFGSQRSGQVTWKGITIE
ANEGEKVQAVASGRVLFAGYFKGYGMVLALDHSDGYISLYGYNQTLLQETGDLVLQGDTIALAGHSGGQDNNSLYFELSH
KGTAKDPLLWLKKKHN

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=426, Percent_Identity=31.6901408450704, Blast_Score=181, Evalue=1e-46,
Organism=Escherichia coli, GI1789099, Length=122, Percent_Identity=36.8852459016393, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI87082174, Length=123, Percent_Identity=34.1463414634146, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 46801; Mature: 46670

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNTNLSKKKRISAVLVNCFLLCFILSIQSSFAADKLATIELQIKTAKGAQNKQTKQQKL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCHHHHHHHH
LEKLVANAEKETAIATLKVQQTKETIQLENSRLKQLIEQTAILEEDKIKQQKLLEQQLIS
HHHHHHCCCHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SYMTGQTDLIKLILNQEDISKIIRAKSYYQYLNKARLESINALYETQQQLENNKSAQADS
HHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LLALTGLYERQKVSAEALLEQRAERSKALKELNQDLNYQYALLAQLGDQAQNLKEKLRKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
SEARQKRELAAKAKAKAKALKNRQSKSEEKTNSNIAKGKEETYSNIAKQLGQLNWPIQGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHCCCCCCCHH
VLSRFGSQRSGQVTWKGITIEANEGEKVQAVASGRVLFAGYFKGYGMVLALDHSDGYISL
HHHHCCCCCCCCEEEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCEEEE
YGYNQTLLQETGDLVLQGDTIALAGHSGGQDNNSLYFELSHKGTAKDPLLWLKKKHN
EECCHHHHHCCCCEEEECCEEEEECCCCCCCCCEEEEEEECCCCCCCCHHHHCCCCC
>Mature Secondary Structure 
TNTNLSKKKRISAVLVNCFLLCFILSIQSSFAADKLATIELQIKTAKGAQNKQTKQQKL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCHHHHHHHH
LEKLVANAEKETAIATLKVQQTKETIQLENSRLKQLIEQTAILEEDKIKQQKLLEQQLIS
HHHHHHCCCHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SYMTGQTDLIKLILNQEDISKIIRAKSYYQYLNKARLESINALYETQQQLENNKSAQADS
HHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LLALTGLYERQKVSAEALLEQRAERSKALKELNQDLNYQYALLAQLGDQAQNLKEKLRKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
SEARQKRELAAKAKAKAKALKNRQSKSEEKTNSNIAKGKEETYSNIAKQLGQLNWPIQGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHCCCCCCCHH
VLSRFGSQRSGQVTWKGITIEANEGEKVQAVASGRVLFAGYFKGYGMVLALDHSDGYISL
HHHHCCCCCCCCEEEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCEEEE
YGYNQTLLQETGDLVLQGDTIALAGHSGGQDNNSLYFELSHKGTAKDPLLWLKKKHN
EECCHHHHHCCCCEEEECCEEEEECCCCCCCCCEEEEEEECCCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]