| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is acsA
Identifier: 119946736
GI number: 119946736
Start: 3840878
End: 3842827
Strand: Direct
Name: acsA
Synonym: Ping_3120
Alternate gene names: 119946736
Gene position: 3840878-3842827 (Clockwise)
Preceding gene: 119946733
Following gene: 119946737
Centisome position: 84.24
GC content: 43.54
Gene sequence:
>1950_bases ATGAGTGAAGAGCACATTTACCCCGTAACAGATAACCTAGCAAAAAATAGCTTACTGACTAATGAAGAGTATTTAACACA ATATCAAGCTTCAATTAGCGATCCGAGCGCATTTTGGGGTGAAAAAGGTAAAATTTTAGATTGGATTAAACCTTATACAA AAGTCAAAAATAGCTCCTTCGATTCAGGTCATGTCAGCATTAAATGGTTTGAAGACGGAAAACTTAACGTTTCAGCTAAC TGTATCGATCGTCACCTTGCCACTAAAGGTGACCAGGTTGCCATTCTTTGGGAAGGTGATACAGCGGATAAAGATGAAAA AATCACCTATAAGCAGCTGCATCAACGTGTTTGTCAGTTTGCCAATGTATTAAAATCCCAAGGTGTTAGAAAGGGTGATG TTGTTTGTTTATATATGCCAATGACGCCGGAAGCGGCCGTTGCCATGCTTGCCTGTACACGTATCGGTGCGGTTCATTCA ATTGTTTTTGGTGGTTTCTCGCCCGATGCGATTGCCGGACGTATTGTTGACAGTAGTGCAAAAATAGTTATTACCGCAGA TGAAGGTCGTCGTGGTGGACGTGTTGTACCGCTTAAAGCGAATGTTGATGAAGCACTGACAAAAGACGGCACAGACTGCG TAAAAAGTGTGATTGTCTTTAAAAATACTGGTGGAGAAGTCAACTGGGTTGTCGGTCGAGATCTTGACTGGGAATCAGTT TGTGCTGATGAATCAAGTGAATGTGAACCAGAAGCGATGAATGCTGAAGATCCGCTTTTCATTCTCTATACTTCGGGCTC CACAGGTACGCCTAAAGGTGTACTGCATACTACCGGCGGTTATCTGGTTTACGCAGCCATGACGTTTAAATATGTATTTG ATTACCAGGAAGGTGATATTTACTGGTGTACTGCCGATGTAGGCTGGATCACCGGGCACACTTATTCAGTTTATGGCCCG CTTGCTAATGGCGCAACATCATTAATATTTGAGGGTGTACCCAATTACCCTACACCTGCACGCATGAGTGAAGTTGTTGA TAAACACAAAGTTTCTATTCTTTATACTGCACCAACGGCAATCCGCGCACTAATGGCAAAAGGTGATCAGGCGATTGAAG GGACACACCGTTCTTCATTGCGTATTTTAGGCTCGGTTGGAGAACCAATTAATCCTGAAGCATGGGAATGGTACTACAAC AAAATAGGTGATGAACGCTGTCCTATCGTTGATACCTGGTGGCAAACTGAAACTGGCGGCATATTAATTAGTCCGCTTCC TGGTGCGACCGATCTGAAACCAGGTTCTGCAACCCGTCCATTCTTTGGTGTTCAACCCGCTATTGTTGATAGTGAAGGGG TCGTTTTAGAGGGTGAAGCTGCAGGTAACTTAGTGATGCTAGATAGCTGGCCAGGACAGATGCGGACACTTTATAACAAC CATGACCGTTTCGAACAAACTTATTTCAGCACCTTTAAGGGGATGTACTTTACCGGTGATGGCGCGCGTCGTGACAGCGA TGGATATTACTGGATAACAGGACGTGTTGATGACGTACTAAATGTTTCAGGTCACCGTATGGGCACCGCTGAAATAGAAA GTGCGTTAGTTTCTCACCCTAAAATAGCGGAAGCCGCTGTTGTTGGCGTACCACACGAAATTAAGGGTCAGGGTATTTAT GCTTATGTCACTTTAAATGAAGGTGAGTACCCTTCTCCTGAATTGTACGCTGAAGTTAAACAATGGGTACGTAAGGAGAT TGGCGCAATTGCAACACCTGATATTTTACATTGGGCAGAAGGTTTACCTAAAACACGCTCAGGTAAAATTATGCGTCGTA TTTTACGTAAAATAGCAACGGGTGAAAGTGATTCTTTAGGTGATATTTCAACACTGGCCGATCCAAGTGTTGTTGAGCAA CTTATTAAAGAGAATCGCGAAACGAGCTAG
Upstream 100 bases:
>100_bases TCATCGGCTCTGCTTTACACTCTCTTCCGAATTAATCAGCAATTACAATCATTTCCTCATTAGCAGGTGATTGGTTTATT TTAAAAAATGGAGTTAAACA
Downstream 100 bases:
>100_bases TCCGCTCACTTTAGCAACATTTCTACTGGCATGCGGCCAGCAGAGCAGATAGACTTCCAGAACATTGTTTCTGGGAGTCT TTTTTTTATGACACAACAAA
Product: acetate--CoA ligase
Products: NA
Alternate protein names: Acetate--CoA ligase; Acyl-activating enzyme
Number of amino acids: Translated: 649; Mature: 648
Protein sequence:
>649_residues MSEEHIYPVTDNLAKNSLLTNEEYLTQYQASISDPSAFWGEKGKILDWIKPYTKVKNSSFDSGHVSIKWFEDGKLNVSAN CIDRHLATKGDQVAILWEGDTADKDEKITYKQLHQRVCQFANVLKSQGVRKGDVVCLYMPMTPEAAVAMLACTRIGAVHS IVFGGFSPDAIAGRIVDSSAKIVITADEGRRGGRVVPLKANVDEALTKDGTDCVKSVIVFKNTGGEVNWVVGRDLDWESV CADESSECEPEAMNAEDPLFILYTSGSTGTPKGVLHTTGGYLVYAAMTFKYVFDYQEGDIYWCTADVGWITGHTYSVYGP LANGATSLIFEGVPNYPTPARMSEVVDKHKVSILYTAPTAIRALMAKGDQAIEGTHRSSLRILGSVGEPINPEAWEWYYN KIGDERCPIVDTWWQTETGGILISPLPGATDLKPGSATRPFFGVQPAIVDSEGVVLEGEAAGNLVMLDSWPGQMRTLYNN HDRFEQTYFSTFKGMYFTGDGARRDSDGYYWITGRVDDVLNVSGHRMGTAEIESALVSHPKIAEAAVVGVPHEIKGQGIY AYVTLNEGEYPSPELYAEVKQWVRKEIGAIATPDILHWAEGLPKTRSGKIMRRILRKIATGESDSLGDISTLADPSVVEQ LIKENRETS
Sequences:
>Translated_649_residues MSEEHIYPVTDNLAKNSLLTNEEYLTQYQASISDPSAFWGEKGKILDWIKPYTKVKNSSFDSGHVSIKWFEDGKLNVSAN CIDRHLATKGDQVAILWEGDTADKDEKITYKQLHQRVCQFANVLKSQGVRKGDVVCLYMPMTPEAAVAMLACTRIGAVHS IVFGGFSPDAIAGRIVDSSAKIVITADEGRRGGRVVPLKANVDEALTKDGTDCVKSVIVFKNTGGEVNWVVGRDLDWESV CADESSECEPEAMNAEDPLFILYTSGSTGTPKGVLHTTGGYLVYAAMTFKYVFDYQEGDIYWCTADVGWITGHTYSVYGP LANGATSLIFEGVPNYPTPARMSEVVDKHKVSILYTAPTAIRALMAKGDQAIEGTHRSSLRILGSVGEPINPEAWEWYYN KIGDERCPIVDTWWQTETGGILISPLPGATDLKPGSATRPFFGVQPAIVDSEGVVLEGEAAGNLVMLDSWPGQMRTLYNN HDRFEQTYFSTFKGMYFTGDGARRDSDGYYWITGRVDDVLNVSGHRMGTAEIESALVSHPKIAEAAVVGVPHEIKGQGIY AYVTLNEGEYPSPELYAEVKQWVRKEIGAIATPDILHWAEGLPKTRSGKIMRRILRKIATGESDSLGDISTLADPSVVEQ LIKENRETS >Mature_648_residues SEEHIYPVTDNLAKNSLLTNEEYLTQYQASISDPSAFWGEKGKILDWIKPYTKVKNSSFDSGHVSIKWFEDGKLNVSANC IDRHLATKGDQVAILWEGDTADKDEKITYKQLHQRVCQFANVLKSQGVRKGDVVCLYMPMTPEAAVAMLACTRIGAVHSI VFGGFSPDAIAGRIVDSSAKIVITADEGRRGGRVVPLKANVDEALTKDGTDCVKSVIVFKNTGGEVNWVVGRDLDWESVC ADESSECEPEAMNAEDPLFILYTSGSTGTPKGVLHTTGGYLVYAAMTFKYVFDYQEGDIYWCTADVGWITGHTYSVYGPL ANGATSLIFEGVPNYPTPARMSEVVDKHKVSILYTAPTAIRALMAKGDQAIEGTHRSSLRILGSVGEPINPEAWEWYYNK IGDERCPIVDTWWQTETGGILISPLPGATDLKPGSATRPFFGVQPAIVDSEGVVLEGEAAGNLVMLDSWPGQMRTLYNNH DRFEQTYFSTFKGMYFTGDGARRDSDGYYWITGRVDDVLNVSGHRMGTAEIESALVSHPKIAEAAVVGVPHEIKGQGIYA YVTLNEGEYPSPELYAEVKQWVRKEIGAIATPDILHWAEGLPKTRSGKIMRRILRKIATGESDSLGDISTLADPSVVEQL IKENRETS
Specific function: Enables The Cell To Use Acetate During Aerobic Growth To Generate Energy Via The Tca Cycle, And Biosynthetic Compounds Via The Glyoxylate Shunt. Acetylates Chey, The Response Regulator Involved In Flagellar Movement And Chemotaxis. [C]
COG id: COG0365
COG function: function code I; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family
Homologues:
Organism=Homo sapiens, GI8923896, Length=653, Percent_Identity=53.9050535987749, Blast_Score=696, Evalue=0.0, Organism=Homo sapiens, GI253970489, Length=663, Percent_Identity=53.0920060331825, Blast_Score=692, Evalue=0.0, Organism=Homo sapiens, GI28416953, Length=613, Percent_Identity=50.4078303425775, Blast_Score=634, Evalue=0.0, Organism=Homo sapiens, GI13375727, Length=639, Percent_Identity=37.7151799687011, Blast_Score=415, Evalue=1e-116, Organism=Homo sapiens, GI42544132, Length=539, Percent_Identity=29.1280148423006, Blast_Score=199, Evalue=7e-51, Organism=Homo sapiens, GI31982927, Length=627, Percent_Identity=25.6778309409888, Blast_Score=192, Evalue=1e-48, Organism=Homo sapiens, GI38505220, Length=518, Percent_Identity=31.4671814671815, Blast_Score=190, Evalue=3e-48, Organism=Homo sapiens, GI122937307, Length=554, Percent_Identity=27.7978339350181, Blast_Score=187, Evalue=3e-47, Organism=Homo sapiens, GI115511026, Length=540, Percent_Identity=26.8518518518519, Blast_Score=172, Evalue=1e-42, Organism=Homo sapiens, GI58082049, Length=568, Percent_Identity=25.5281690140845, Blast_Score=161, Evalue=2e-39, Organism=Homo sapiens, GI157311624, Length=568, Percent_Identity=24.8239436619718, Blast_Score=149, Evalue=8e-36, Organism=Homo sapiens, GI157311622, Length=568, Percent_Identity=24.8239436619718, Blast_Score=149, Evalue=8e-36, Organism=Homo sapiens, GI187761345, Length=390, Percent_Identity=28.4615384615385, Blast_Score=113, Evalue=5e-25, Organism=Homo sapiens, GI187761343, Length=390, Percent_Identity=28.4615384615385, Blast_Score=113, Evalue=5e-25, Organism=Homo sapiens, GI195947378, Length=437, Percent_Identity=26.0869565217391, Blast_Score=106, Evalue=7e-23, Organism=Homo sapiens, GI42544134, Length=359, Percent_Identity=26.1838440111421, Blast_Score=103, Evalue=6e-22, Organism=Homo sapiens, GI156151445, Length=391, Percent_Identity=25.3196930946292, Blast_Score=87, Evalue=6e-17, Organism=Escherichia coli, GI1790505, Length=646, Percent_Identity=71.5170278637771, Blast_Score=1003, Evalue=0.0, Organism=Escherichia coli, GI1786529, Length=640, Percent_Identity=35.46875, Blast_Score=388, Evalue=1e-109, Organism=Escherichia coli, GI221142682, Length=545, Percent_Identity=23.8532110091743, Blast_Score=114, Evalue=2e-26, Organism=Escherichia coli, GI1788107, Length=594, Percent_Identity=24.0740740740741, Blast_Score=104, Evalue=2e-23, Organism=Escherichia coli, GI145693145, Length=540, Percent_Identity=23.8888888888889, Blast_Score=101, Evalue=1e-22, Organism=Escherichia coli, GI1786810, Length=556, Percent_Identity=23.021582733813, Blast_Score=91, Evalue=2e-19, Organism=Caenorhabditis elegans, GI71982997, Length=659, Percent_Identity=50.834597875569, Blast_Score=637, Evalue=0.0, Organism=Caenorhabditis elegans, GI71983001, Length=638, Percent_Identity=51.8808777429467, Blast_Score=635, Evalue=0.0, Organism=Caenorhabditis elegans, GI17569507, Length=603, Percent_Identity=21.7247097844113, Blast_Score=126, Evalue=4e-29, Organism=Caenorhabditis elegans, GI17558820, Length=550, Percent_Identity=24, Blast_Score=104, Evalue=1e-22, Organism=Caenorhabditis elegans, GI32563687, Length=546, Percent_Identity=22.7106227106227, Blast_Score=102, Evalue=8e-22, Organism=Caenorhabditis elegans, GI17559526, Length=585, Percent_Identity=23.9316239316239, Blast_Score=102, Evalue=8e-22, Organism=Caenorhabditis elegans, GI17557194, Length=559, Percent_Identity=23.0769230769231, Blast_Score=94, Evalue=2e-19, Organism=Caenorhabditis elegans, GI71985884, Length=593, Percent_Identity=24.4519392917369, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17538037, Length=134, Percent_Identity=33.5820895522388, Blast_Score=83, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6323182, Length=637, Percent_Identity=49.607535321821, Blast_Score=633, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6319264, Length=637, Percent_Identity=48.3516483516484, Blast_Score=597, Evalue=1e-171, Organism=Saccharomyces cerevisiae, GI6319699, Length=543, Percent_Identity=23.0202578268877, Blast_Score=110, Evalue=5e-25, Organism=Drosophila melanogaster, GI24667955, Length=661, Percent_Identity=54.7655068078669, Blast_Score=715, Evalue=0.0, Organism=Drosophila melanogaster, GI62472339, Length=553, Percent_Identity=59.1320072332731, Blast_Score=660, Evalue=0.0, Organism=Drosophila melanogaster, GI24667959, Length=517, Percent_Identity=59.5744680851064, Blast_Score=617, Evalue=1e-177, Organism=Drosophila melanogaster, GI21355225, Length=634, Percent_Identity=34.7003154574132, Blast_Score=373, Evalue=1e-103, Organism=Drosophila melanogaster, GI18859661, Length=557, Percent_Identity=26.032315978456, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI21355181, Length=532, Percent_Identity=23.8721804511278, Blast_Score=96, Evalue=8e-20, Organism=Drosophila melanogaster, GI24581924, Length=542, Percent_Identity=22.3247232472325, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI24656500, Length=379, Percent_Identity=26.9129287598945, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI21358303, Length=334, Percent_Identity=23.0538922155689, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24648257, Length=367, Percent_Identity=23.1607629427793, Blast_Score=66, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ACSA_PSYIN (A1SZA2)
Other databases:
- EMBL: CP000510 - RefSeq: YP_944416.1 - ProteinModelPortal: A1SZA2 - SMR: A1SZA2 - STRING: A1SZA2 - GeneID: 4625912 - GenomeReviews: CP000510_GR - KEGG: pin:Ping_3120 - eggNOG: COG0365 - HOGENOM: HBG547964 - OMA: ATYLEWY - PhylomeDB: A1SZA2 - BioCyc: PING357804:PING_3120-MONOMER - HAMAP: MF_01123 - InterPro: IPR011904 - InterPro: IPR020845 - InterPro: IPR000873 - TIGRFAMs: TIGR02188
Pfam domain/function: PF00501 AMP-binding
EC number: =6.2.1.1
Molecular weight: Translated: 71307; Mature: 71176
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS00455 AMP_BINDING
Important sites: ACT_SITE 517-517
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEEHIYPVTDNLAKNSLLTNEEYLTQYQASISDPSAFWGEKGKILDWIKPYTKVKNSSF CCCCCEECCCCCHHHCCCCCCHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHCCCCC DSGHVSIKWFEDGKLNVSANCIDRHLATKGDQVAILWEGDTADKDEKITYKQLHQRVCQF CCCEEEEEEECCCCEEEEHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHH ANVLKSQGVRKGDVVCLYMPMTPEAAVAMLACTRIGAVHSIVFGGFSPDAIAGRIVDSSA HHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHEECCCCCHHHEEEEECCCC KIVITADEGRRGGRVVPLKANVDEALTKDGTDCVKSVIVFKNTGGEVNWVVGRDLDWESV EEEEEECCCCCCCEEEEEECCCHHHHHCCCHHHHHEEEEEECCCCEEEEEEECCCCHHHH CADESSECEPEAMNAEDPLFILYTSGSTGTPKGVLHTTGGYLVYAAMTFKYVFDYQEGDI CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEECCCCEEEEEEEEEEEEEEECCCCE YWCTADVGWITGHTYSVYGPLANGATSLIFEGVPNYPTPARMSEVVDKHKVSILYTAPTA EEEECCCCEEECCEEEEECCCCCCCHHHEECCCCCCCCHHHHHHHHHHHCEEEEEECHHH IRALMAKGDQAIEGTHRSSLRILGSVGEPINPEAWEWYYNKIGDERCPIVDTWWQTETGG HHHHHHCCCHHHCCCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCC ILISPLPGATDLKPGSATRPFFGVQPAIVDSEGVVLEGEAAGNLVMLDSWPGQMRTLYNN EEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCCCCCEEEEECCCCHHHHHHCC HDRFEQTYFSTFKGMYFTGDGARRDSDGYYWITGRVDDVLNVSGHRMGTAEIESALVSHP HHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEECCCCHHHCCCCCCCCHHHHHHHHHCCC KIAEAAVVGVPHEIKGQGIYAYVTLNEGEYPSPELYAEVKQWVRKEIGAIATPDILHWAE CHHHEEEECCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH GLPKTRSGKIMRRILRKIATGESDSLGDISTLADPSVVEQLIKENRETS CCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHCCCCCC >Mature Secondary Structure SEEHIYPVTDNLAKNSLLTNEEYLTQYQASISDPSAFWGEKGKILDWIKPYTKVKNSSF CCCCEECCCCCHHHCCCCCCHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHCCCCC DSGHVSIKWFEDGKLNVSANCIDRHLATKGDQVAILWEGDTADKDEKITYKQLHQRVCQF CCCEEEEEEECCCCEEEEHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHH ANVLKSQGVRKGDVVCLYMPMTPEAAVAMLACTRIGAVHSIVFGGFSPDAIAGRIVDSSA HHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHEECCCCCHHHEEEEECCCC KIVITADEGRRGGRVVPLKANVDEALTKDGTDCVKSVIVFKNTGGEVNWVVGRDLDWESV EEEEEECCCCCCCEEEEEECCCHHHHHCCCHHHHHEEEEEECCCCEEEEEEECCCCHHHH CADESSECEPEAMNAEDPLFILYTSGSTGTPKGVLHTTGGYLVYAAMTFKYVFDYQEGDI CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEECCCCEEEEEEEEEEEEEEECCCCE YWCTADVGWITGHTYSVYGPLANGATSLIFEGVPNYPTPARMSEVVDKHKVSILYTAPTA EEEECCCCEEECCEEEEECCCCCCCHHHEECCCCCCCCHHHHHHHHHHHCEEEEEECHHH IRALMAKGDQAIEGTHRSSLRILGSVGEPINPEAWEWYYNKIGDERCPIVDTWWQTETGG HHHHHHCCCHHHCCCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCC ILISPLPGATDLKPGSATRPFFGVQPAIVDSEGVVLEGEAAGNLVMLDSWPGQMRTLYNN EEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCCCCCEEEEECCCCHHHHHHCC HDRFEQTYFSTFKGMYFTGDGARRDSDGYYWITGRVDDVLNVSGHRMGTAEIESALVSHP HHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEECCCCHHHCCCCCCCCHHHHHHHHHCCC KIAEAAVVGVPHEIKGQGIYAYVTLNEGEYPSPELYAEVKQWVRKEIGAIATPDILHWAE CHHHEEEECCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH GLPKTRSGKIMRRILRKIATGESDSLGDISTLADPSVVEQLIKENRETS CCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA