| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is 119946677
Identifier: 119946677
GI number: 119946677
Start: 3756715
End: 3757152
Strand: Reverse
Name: 119946677
Synonym: Ping_3058
Alternate gene names: NA
Gene position: 3757152-3756715 (Counterclockwise)
Preceding gene: 119946678
Following gene: 119946676
Centisome position: 82.4
GC content: 41.1
Gene sequence:
>438_bases TTGTTGAAAGCGCTGCGGCCTAAAAGCCGCAGCGCTTTTTTTTATATGACTGAGACAATGAAGAAAATTTTTCTGGTGTT ATTTGTACTCTATTCAGGGTCTGTTTTTTCTCTGGAGACCGTCAGAGTGAAAAATGCCGAACTGAACGAGCTCTATCTGT ATAACGGCAGCAGGTTGGAGGTCATTCCCGCGGAAGGGGTGATTGTTTATGTCGAGGGCAATGCAAATAAAAGAGTAAAG TTAACAATTAAGGCGACTGGAGCTGTCTATCTGACCTCTGGAGTGAGAATTGACAATCTCAGGGCTAAAAATCCGATTAT AAGGCTCGATAAATACGGCGAAGGACAGTTTGAAATAGGGTTTTCTCTGCTGGGGGAAAAAAAAGTCAGCGGTAAACACA AAAAACAGATAAAGTATGAGATTGAATATTTAGACTAA
Upstream 100 bases:
>100_bases AAAAATTGTAGATGGTGCGGACGTAGCTGAGACTATAACAGTTACAGTTACTTATGATTCAATAGATAGCACAACAAATA CAACAGCAGCTTAATAGCTA
Downstream 100 bases:
>100_bases CTGAATATCCTACCCGTTTACCATTTCCTATCCACTTGTGTTCAACTATTCAACTATTCAACTATTTAACTATTTAACTA TTTAACTATTTAACTATGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MLKALRPKSRSAFFYMTETMKKIFLVLFVLYSGSVFSLETVRVKNAELNELYLYNGSRLEVIPAEGVIVYVEGNANKRVK LTIKATGAVYLTSGVRIDNLRAKNPIIRLDKYGEGQFEIGFSLLGEKKVSGKHKKQIKYEIEYLD
Sequences:
>Translated_145_residues MLKALRPKSRSAFFYMTETMKKIFLVLFVLYSGSVFSLETVRVKNAELNELYLYNGSRLEVIPAEGVIVYVEGNANKRVK LTIKATGAVYLTSGVRIDNLRAKNPIIRLDKYGEGQFEIGFSLLGEKKVSGKHKKQIKYEIEYLD >Mature_145_residues MLKALRPKSRSAFFYMTETMKKIFLVLFVLYSGSVFSLETVRVKNAELNELYLYNGSRLEVIPAEGVIVYVEGNANKRVK LTIKATGAVYLTSGVRIDNLRAKNPIIRLDKYGEGQFEIGFSLLGEKKVSGKHKKQIKYEIEYLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16520; Mature: 16520
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKALRPKSRSAFFYMTETMKKIFLVLFVLYSGSVFSLETVRVKNAELNELYLYNGSRLE CCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCEEEEECCCEEE VIPAEGVIVYVEGNANKRVKLTIKATGAVYLTSGVRIDNLRAKNPIIRLDKYGEGQFEIG EEECCCEEEEEECCCCCEEEEEEEECCEEEEECCEEEECEECCCCEEEEECCCCCEEEEE FSLLGEKKVSGKHKKQIKYEIEYLD EEEECCCCCCCCCCEEEEEEEEEEC >Mature Secondary Structure MLKALRPKSRSAFFYMTETMKKIFLVLFVLYSGSVFSLETVRVKNAELNELYLYNGSRLE CCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCEEEEECCCEEE VIPAEGVIVYVEGNANKRVKLTIKATGAVYLTSGVRIDNLRAKNPIIRLDKYGEGQFEIG EEECCCEEEEEECCCCCEEEEEEEECCEEEEECCEEEECEECCCCEEEEECCCCCEEEEE FSLLGEKKVSGKHKKQIKYEIEYLD EEEECCCCCCCCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA