| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946669
Identifier: 119946669
GI number: 119946669
Start: 3748149
End: 3748949
Strand: Direct
Name: 119946669
Synonym: Ping_3049
Alternate gene names: NA
Gene position: 3748149-3748949 (Clockwise)
Preceding gene: 119946668
Following gene: 119946670
Centisome position: 82.2
GC content: 44.44
Gene sequence:
>801_bases ATGAGCATAACTATTATGAATAATGAGACTCCCTGGTGGGGAGAGGTTAATCTGGATAAAGAGCGTTGTCTGCAATTAGA CATTGGCCCTTTGTCCGTAGCGATAGAGCATGACGCCCATGAGTGGCGCATCCATTCTCAACGGGAAAAGGAGGTCGATA CTAATGATAATCGTCTGCACAAAATAGTCGGCCAATTTTCGCCCTGTTATTATCAGGATGTCGCACGCTATATTGTCAAC AGCAGCAGCAATCATATTCAATTATTACCGGCATTGGCCGACAGGTCAGTCGTTTGCCGGCCGGTTGCGCCAATCAACCT TGATGCCGGTGCAAGTGTGACTTTATATGTTAGCACCCCGATTTATTTGATGATTAACGTCGTCAACAGCAAAACCTCCT TATTACAGGAACTCGCCACTCAGCGTCTTTCCGATACCTGGTTTGGTCCGTCAACCTGCAGTGGTGAGTTATGTTACGCC AGTGCCACCAGTGGTCGTTTAGATTTGCAAAAACTCCCCTATCGCATTCAAAGAGCGACAACCCCTCTGCTGATACATAA TAATGCCGATGATAATTTACTTTTTGAAAGAGTCGCCTTACCCACCCCCCTATTATCACTTTACGCCGCTAAAAATGGTC AATTATGGACCGAAAATATCACCCTAACCCGGGAAGATAATGGTGATTTTGCACAGCTAAAATTAGGCAAAGCTCCGCTG AAAATGTCATTCGTTAATGGACCAAGAAAAAACATAGGCCATAGTCAGATAATTCGCGCCTTTAGTGCCATTTTTAATTA A
Upstream 100 bases:
>100_bases TAATCTCGATAAAGAGCGTTGTTTACAACTAGACAATATTACCCCTTTGTCCGTGGCGATAGAGCATCATAATTATAAAT AATATACATAACTATTATAA
Downstream 100 bases:
>100_bases AGATATAAAATGAATGAGATAGGGCATTACCTCACTGATATTGTTAATATCGAGTTCCTCGCCAAACTGCTGCGCGCGGC TTTATTATTAATATTAGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MSITIMNNETPWWGEVNLDKERCLQLDIGPLSVAIEHDAHEWRIHSQREKEVDTNDNRLHKIVGQFSPCYYQDVARYIVN SSSNHIQLLPALADRSVVCRPVAPINLDAGASVTLYVSTPIYLMINVVNSKTSLLQELATQRLSDTWFGPSTCSGELCYA SATSGRLDLQKLPYRIQRATTPLLIHNNADDNLLFERVALPTPLLSLYAAKNGQLWTENITLTREDNGDFAQLKLGKAPL KMSFVNGPRKNIGHSQIIRAFSAIFN
Sequences:
>Translated_266_residues MSITIMNNETPWWGEVNLDKERCLQLDIGPLSVAIEHDAHEWRIHSQREKEVDTNDNRLHKIVGQFSPCYYQDVARYIVN SSSNHIQLLPALADRSVVCRPVAPINLDAGASVTLYVSTPIYLMINVVNSKTSLLQELATQRLSDTWFGPSTCSGELCYA SATSGRLDLQKLPYRIQRATTPLLIHNNADDNLLFERVALPTPLLSLYAAKNGQLWTENITLTREDNGDFAQLKLGKAPL KMSFVNGPRKNIGHSQIIRAFSAIFN >Mature_265_residues SITIMNNETPWWGEVNLDKERCLQLDIGPLSVAIEHDAHEWRIHSQREKEVDTNDNRLHKIVGQFSPCYYQDVARYIVNS SSNHIQLLPALADRSVVCRPVAPINLDAGASVTLYVSTPIYLMINVVNSKTSLLQELATQRLSDTWFGPSTCSGELCYAS ATSGRLDLQKLPYRIQRATTPLLIHNNADDNLLFERVALPTPLLSLYAAKNGQLWTENITLTREDNGDFAQLKLGKAPLK MSFVNGPRKNIGHSQIIRAFSAIFN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29833; Mature: 29702
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSITIMNNETPWWGEVNLDKERCLQLDIGPLSVAIEHDAHEWRIHSQREKEVDTNDNRLH CEEEEECCCCCCCEEECCCHHHEEEEECCCEEEEEECCCCEEEECCCHHCCCCCCCHHHH KIVGQFSPCYYQDVARYIVNSSSNHIQLLPALADRSVVCRPVAPINLDAGASVTLYVSTP HHHHCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEECCCCEEECCCCEEEEEECCC IYLMINVVNSKTSLLQELATQRLSDTWFGPSTCSGELCYASATSGRLDLQKLPYRIQRAT EEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHCCHHHHHCC TPLLIHNNADDNLLFERVALPTPLLSLYAAKNGQLWTENITLTREDNGDFAQLKLGKAPL CCEEEECCCCCCHHHHHHHCCCHHHHHEECCCCCEEECEEEEEECCCCCEEEEEECCCCE KMSFVNGPRKNIGHSQIIRAFSAIFN EEEECCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure SITIMNNETPWWGEVNLDKERCLQLDIGPLSVAIEHDAHEWRIHSQREKEVDTNDNRLH EEEEECCCCCCCEEECCCHHHEEEEECCCEEEEEECCCCEEEECCCHHCCCCCCCHHHH KIVGQFSPCYYQDVARYIVNSSSNHIQLLPALADRSVVCRPVAPINLDAGASVTLYVSTP HHHHCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEECCCCEEECCCCEEEEEECCC IYLMINVVNSKTSLLQELATQRLSDTWFGPSTCSGELCYASATSGRLDLQKLPYRIQRAT EEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHCCHHHHHCC TPLLIHNNADDNLLFERVALPTPLLSLYAAKNGQLWTENITLTREDNGDFAQLKLGKAPL CCEEEECCCCCCHHHHHHHCCCHHHHHEECCCCCEEECEEEEEECCCCCEEEEEECCCCE KMSFVNGPRKNIGHSQIIRAFSAIFN EEEECCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA