| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is srmB [H]
Identifier: 119946657
GI number: 119946657
Start: 3735448
End: 3736809
Strand: Direct
Name: srmB [H]
Synonym: Ping_3036
Alternate gene names: 119946657
Gene position: 3735448-3736809 (Clockwise)
Preceding gene: 119946656
Following gene: 119946661
Centisome position: 81.92
GC content: 43.98
Gene sequence:
>1362_bases ATGTCTTTTGAAGCGCTTGAGCTCGACCAACATTTATTAAACGCCATTGCTAAAATGGGGCATACTCGCCCAACAAGCAT TCAAACCTTAGCTATCCCGCTCGCGATGGATGAACGTGACATTATGGCAAGTGCCCCCACTGGCACCGGCAAAACATTGG CGTTTTTGCTGCCTGCAGTCCAGCGTTTGATTGATTTTCCTCGTCGAAAAGGCGGCTCTGCGCGAATTTTAATATTAACA CCCACACGCGAACTCGCGGTGCAAATTAGCGGTGTTGCTTCTGCGCTTGTTGAAGGGACACAGCTGGTTGTGGGTAATAT CATCGGTGGAGTTTCTTACCAGGAACAGGAAGAAGTGATTACTGACAGTGTTGATATAGTGATCGCAACGCCGGGTCGTT TAATGGAATACATCGATTCCGAAGCCTTTGATTGTCGGGAAGTCGAAACCCTAATTCTAGATGAAGCGGACCGCATGTTA GATATGGGCTTTATCAAAGCGATGGACAGGATTGTAGGTGAAACTCGCTGGCGTAAACATACCGCCCTTTTCTCAGCAAC ACTCGAAGGTAGAGGTCTGCGTGAATTTTGTCGTGATGTATTAAGAAATCCTGCGCAATTAACGGCTGAAGTTTCGCGTC GTGAAAGTGGCAAGATTTTACAATGGGTTCATCTTGCGGACAGCCCCGAGCATAAACTGCAGTTACTAGCAGCTATTTTA GAACAGCCAGTAAAAGAAGAAGAACAGCAACAAAAAGTAATAGTGTTTGTAAAAACACGCGATCGTTTAACTGAACTGGT CGCACAACTTGCAGAGTTACAAATCCCTTGTACCTATCTGCGTGGCGAAATGGATCAGGAAAAACGCAACCTGGCTTTAA ACCAATTTAGAGCGGGTAACATTAATATTTTGATTGCAACCGATGTAGCAGCCCGTGGTATTGATGTGCCTGATATCACC CATGTTATTAACTATGATATGCCGCGCAGTGCCGATATTTACGTGCATCGCATTGGCCGTACTGCGCGTGGCGGTAAAAA AGGTATCGCGATTTCATTAATTGAAGCACATGATGTTGATATGCTTGCAAAAGTTGAGCGTTACACAGACCAAATTATAA AACGCCGCGTGGTCAAAACCCTGCGCCCGACGCATAAAGAAGCGCAACCTAGCCAGCGTAAAACAAAAAATAACGTCAAT AAAAAAAGTAAAAATCGCGAAGAAGAGTTGAAAAAAGAACAAAAAGCTAAACGTCTTAAGAAAAAAGAAGATATGGGTAA ACAGCGCCATCGTAATATAAAAGCGAAAGGTAAACCAAGCTGGGCTGGAAAAGGTAAAACAGAAAATAAAACTGAAGAAT AG
Upstream 100 bases:
>100_bases ATCCGTTGTTTAACTTTTTTTCTTTTTTTATCAATTTTGAACACTATTATAATCTTTGCTTTATAATGCCCATTATTACC TATCGGAACTGGAAACACGC
Downstream 100 bases:
>100_bases CTATCTCAGCTGTCAGTTATCGGCTGACAGCTGACAGCTAACAGCCGATATTTACATTTCATCCCGATAAAAAACCAATT CTGTGGCACTCGATGCAGAT
Product: ATP-dependent RNA helicase, DEAD box family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MSFEALELDQHLLNAIAKMGHTRPTSIQTLAIPLAMDERDIMASAPTGTGKTLAFLLPAVQRLIDFPRRKGGSARILILT PTRELAVQISGVASALVEGTQLVVGNIIGGVSYQEQEEVITDSVDIVIATPGRLMEYIDSEAFDCREVETLILDEADRML DMGFIKAMDRIVGETRWRKHTALFSATLEGRGLREFCRDVLRNPAQLTAEVSRRESGKILQWVHLADSPEHKLQLLAAIL EQPVKEEEQQQKVIVFVKTRDRLTELVAQLAELQIPCTYLRGEMDQEKRNLALNQFRAGNINILIATDVAARGIDVPDIT HVINYDMPRSADIYVHRIGRTARGGKKGIAISLIEAHDVDMLAKVERYTDQIIKRRVVKTLRPTHKEAQPSQRKTKNNVN KKSKNREEELKKEQKAKRLKKKEDMGKQRHRNIKAKGKPSWAGKGKTENKTEE
Sequences:
>Translated_453_residues MSFEALELDQHLLNAIAKMGHTRPTSIQTLAIPLAMDERDIMASAPTGTGKTLAFLLPAVQRLIDFPRRKGGSARILILT PTRELAVQISGVASALVEGTQLVVGNIIGGVSYQEQEEVITDSVDIVIATPGRLMEYIDSEAFDCREVETLILDEADRML DMGFIKAMDRIVGETRWRKHTALFSATLEGRGLREFCRDVLRNPAQLTAEVSRRESGKILQWVHLADSPEHKLQLLAAIL EQPVKEEEQQQKVIVFVKTRDRLTELVAQLAELQIPCTYLRGEMDQEKRNLALNQFRAGNINILIATDVAARGIDVPDIT HVINYDMPRSADIYVHRIGRTARGGKKGIAISLIEAHDVDMLAKVERYTDQIIKRRVVKTLRPTHKEAQPSQRKTKNNVN KKSKNREEELKKEQKAKRLKKKEDMGKQRHRNIKAKGKPSWAGKGKTENKTEE >Mature_452_residues SFEALELDQHLLNAIAKMGHTRPTSIQTLAIPLAMDERDIMASAPTGTGKTLAFLLPAVQRLIDFPRRKGGSARILILTP TRELAVQISGVASALVEGTQLVVGNIIGGVSYQEQEEVITDSVDIVIATPGRLMEYIDSEAFDCREVETLILDEADRMLD MGFIKAMDRIVGETRWRKHTALFSATLEGRGLREFCRDVLRNPAQLTAEVSRRESGKILQWVHLADSPEHKLQLLAAILE QPVKEEEQQQKVIVFVKTRDRLTELVAQLAELQIPCTYLRGEMDQEKRNLALNQFRAGNINILIATDVAARGIDVPDITH VINYDMPRSADIYVHRIGRTARGGKKGIAISLIEAHDVDMLAKVERYTDQIIKRRVVKTLRPTHKEAQPSQRKTKNNVNK KSKNREEELKKEQKAKRLKKKEDMGKQRHRNIKAKGKPSWAGKGKTENKTEE
Specific function: RNA-dependent ATPase activity. Probably interacts with 23S ribosomal RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI38201710, Length=451, Percent_Identity=34.1463414634146, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI148613856, Length=451, Percent_Identity=33.9246119733925, Blast_Score=235, Evalue=7e-62, Organism=Homo sapiens, GI4758138, Length=384, Percent_Identity=35.9375, Blast_Score=226, Evalue=4e-59, Organism=Homo sapiens, GI224593278, Length=382, Percent_Identity=35.0785340314136, Blast_Score=226, Evalue=4e-59, Organism=Homo sapiens, GI20149629, Length=366, Percent_Identity=36.3387978142077, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI45446747, Length=367, Percent_Identity=34.8773841961853, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI45446743, Length=367, Percent_Identity=34.8773841961853, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI51094101, Length=360, Percent_Identity=34.7222222222222, Blast_Score=212, Evalue=5e-55, Organism=Homo sapiens, GI164419743, Length=360, Percent_Identity=34.7222222222222, Blast_Score=212, Evalue=5e-55, Organism=Homo sapiens, GI41327771, Length=389, Percent_Identity=33.6760925449871, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI41327773, Length=371, Percent_Identity=34.7708894878706, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI222352149, Length=358, Percent_Identity=35.4748603351955, Blast_Score=206, Evalue=5e-53, Organism=Homo sapiens, GI262118318, Length=377, Percent_Identity=35.0132625994695, Blast_Score=203, Evalue=2e-52, Organism=Homo sapiens, GI216548263, Length=377, Percent_Identity=35.0132625994695, Blast_Score=203, Evalue=2e-52, Organism=Homo sapiens, GI13518015, Length=377, Percent_Identity=35.0132625994695, Blast_Score=203, Evalue=3e-52, Organism=Homo sapiens, GI262231852, Length=377, Percent_Identity=35.0132625994695, Blast_Score=203, Evalue=3e-52, Organism=Homo sapiens, GI21071032, Length=365, Percent_Identity=34.2465753424658, Blast_Score=201, Evalue=9e-52, Organism=Homo sapiens, GI31542656, Length=450, Percent_Identity=32.6666666666667, Blast_Score=199, Evalue=5e-51, Organism=Homo sapiens, GI55749865, Length=372, Percent_Identity=33.0645161290323, Blast_Score=198, Evalue=8e-51, Organism=Homo sapiens, GI301171467, Length=381, Percent_Identity=35.1706036745407, Blast_Score=198, Evalue=9e-51, Organism=Homo sapiens, GI301171475, Length=381, Percent_Identity=35.1706036745407, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI87196351, Length=381, Percent_Identity=35.1706036745407, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI41327776, Length=366, Percent_Identity=33.6065573770492, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI38327634, Length=371, Percent_Identity=32.0754716981132, Blast_Score=195, Evalue=7e-50, Organism=Homo sapiens, GI169881239, Length=381, Percent_Identity=34.3832020997375, Blast_Score=192, Evalue=5e-49, Organism=Homo sapiens, GI13514809, Length=381, Percent_Identity=34.3832020997375, Blast_Score=192, Evalue=5e-49, Organism=Homo sapiens, GI164664518, Length=368, Percent_Identity=32.0652173913043, Blast_Score=192, Evalue=6e-49, Organism=Homo sapiens, GI13514831, Length=356, Percent_Identity=31.4606741573034, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI7661920, Length=367, Percent_Identity=31.3351498637602, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI50659095, Length=381, Percent_Identity=29.3963254593176, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI188035877, Length=408, Percent_Identity=30.6372549019608, Blast_Score=176, Evalue=4e-44, Organism=Homo sapiens, GI38569505, Length=372, Percent_Identity=33.0645161290323, Blast_Score=175, Evalue=7e-44, Organism=Homo sapiens, GI38569503, Length=372, Percent_Identity=33.0645161290323, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI21040371, Length=371, Percent_Identity=31.8059299191375, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI41327779, Length=393, Percent_Identity=34.3511450381679, Blast_Score=172, Evalue=7e-43, Organism=Homo sapiens, GI13129006, Length=381, Percent_Identity=29.9212598425197, Blast_Score=172, Evalue=8e-43, Organism=Homo sapiens, GI4758112, Length=371, Percent_Identity=31.266846361186, Blast_Score=168, Evalue=1e-41, Organism=Homo sapiens, GI18375623, Length=371, Percent_Identity=31.266846361186, Blast_Score=168, Evalue=1e-41, Organism=Homo sapiens, GI17505907, Length=419, Percent_Identity=31.2649164677804, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI9506931, Length=404, Percent_Identity=29.9504950495049, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI8922886, Length=386, Percent_Identity=30.5699481865285, Blast_Score=162, Evalue=6e-40, Organism=Homo sapiens, GI6005743, Length=386, Percent_Identity=30.8290155440415, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI83700235, Length=375, Percent_Identity=30.9333333333333, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI4503529, Length=375, Percent_Identity=30.4, Blast_Score=159, Evalue=4e-39, Organism=Homo sapiens, GI62241022, Length=369, Percent_Identity=30.3523035230352, Blast_Score=150, Evalue=3e-36, Organism=Homo sapiens, GI164419732, Length=381, Percent_Identity=30.9711286089239, Blast_Score=146, Evalue=3e-35, Organism=Homo sapiens, GI154759257, Length=371, Percent_Identity=32.0754716981132, Blast_Score=146, Evalue=4e-35, Organism=Homo sapiens, GI256223453, Length=363, Percent_Identity=29.7520661157025, Blast_Score=142, Evalue=6e-34, Organism=Homo sapiens, GI9966805, Length=320, Percent_Identity=30.9375, Blast_Score=142, Evalue=8e-34, Organism=Homo sapiens, GI62241024, Length=360, Percent_Identity=29.1666666666667, Blast_Score=135, Evalue=1e-31, Organism=Homo sapiens, GI256773275, Length=427, Percent_Identity=29.03981264637, Blast_Score=122, Evalue=1e-27, Organism=Homo sapiens, GI4826686, Length=334, Percent_Identity=28.4431137724551, Blast_Score=119, Evalue=8e-27, Organism=Homo sapiens, GI20336298, Length=360, Percent_Identity=28.6111111111111, Blast_Score=112, Evalue=1e-24, Organism=Escherichia coli, GI1788930, Length=443, Percent_Identity=52.8216704288939, Blast_Score=414, Evalue=1e-117, Organism=Escherichia coli, GI1787016, Length=397, Percent_Identity=38.7909319899244, Blast_Score=246, Evalue=1e-66, Organism=Escherichia coli, GI1790214, Length=422, Percent_Identity=36.2559241706161, Blast_Score=233, Evalue=2e-62, Organism=Escherichia coli, GI87082221, Length=372, Percent_Identity=36.2903225806452, Blast_Score=205, Evalue=6e-54, Organism=Escherichia coli, GI1787605, Length=345, Percent_Identity=32.1739130434783, Blast_Score=169, Evalue=4e-43, Organism=Caenorhabditis elegans, GI17555296, Length=366, Percent_Identity=37.431693989071, Blast_Score=240, Evalue=1e-63, Organism=Caenorhabditis elegans, GI115533224, Length=339, Percent_Identity=38.6430678466077, Blast_Score=225, Evalue=4e-59, Organism=Caenorhabditis elegans, GI71999644, Length=360, Percent_Identity=35.5555555555556, Blast_Score=214, Evalue=5e-56, Organism=Caenorhabditis elegans, GI71999646, Length=360, Percent_Identity=35.2777777777778, Blast_Score=214, Evalue=5e-56, Organism=Caenorhabditis elegans, GI17510559, Length=407, Percent_Identity=33.4152334152334, Blast_Score=213, Evalue=1e-55, Organism=Caenorhabditis elegans, GI86570094, Length=353, Percent_Identity=36.5439093484419, Blast_Score=210, Evalue=1e-54, Organism=Caenorhabditis elegans, GI17537549, Length=422, Percent_Identity=35.5450236966825, Blast_Score=210, Evalue=1e-54, Organism=Caenorhabditis elegans, GI17552642, Length=366, Percent_Identity=34.4262295081967, Blast_Score=207, Evalue=6e-54, Organism=Caenorhabditis elegans, GI17507881, Length=384, Percent_Identity=34.1145833333333, Blast_Score=203, Evalue=2e-52, Organism=Caenorhabditis elegans, GI71987143, Length=372, Percent_Identity=32.7956989247312, Blast_Score=203, Evalue=2e-52, Organism=Caenorhabditis elegans, GI17510307, Length=378, Percent_Identity=34.6560846560847, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI17510309, Length=378, Percent_Identity=34.6560846560847, Blast_Score=202, Evalue=4e-52, Organism=Caenorhabditis elegans, GI71995514, Length=378, Percent_Identity=34.6560846560847, Blast_Score=201, Evalue=5e-52, Organism=Caenorhabditis elegans, GI17505370, Length=348, Percent_Identity=34.1954022988506, Blast_Score=199, Evalue=2e-51, Organism=Caenorhabditis elegans, GI71995724, Length=367, Percent_Identity=33.7874659400545, Blast_Score=199, Evalue=3e-51, Organism=Caenorhabditis elegans, GI32565321, Length=381, Percent_Identity=33.5958005249344, Blast_Score=199, Evalue=3e-51, Organism=Caenorhabditis elegans, GI17507121, Length=367, Percent_Identity=33.5149863760218, Blast_Score=198, Evalue=4e-51, Organism=Caenorhabditis elegans, GI17507879, Length=392, Percent_Identity=34.6938775510204, Blast_Score=197, Evalue=9e-51, Organism=Caenorhabditis elegans, GI17507877, Length=381, Percent_Identity=34.6456692913386, Blast_Score=197, Evalue=1e-50, Organism=Caenorhabditis elegans, GI17507945, Length=366, Percent_Identity=33.3333333333333, Blast_Score=194, Evalue=6e-50, Organism=Caenorhabditis elegans, GI17509811, Length=375, Percent_Identity=32.2666666666667, Blast_Score=194, Evalue=6e-50, Organism=Caenorhabditis elegans, GI71995718, Length=373, Percent_Identity=35.1206434316354, Blast_Score=192, Evalue=3e-49, Organism=Caenorhabditis elegans, GI17552114, Length=379, Percent_Identity=31.1345646437995, Blast_Score=187, Evalue=1e-47, Organism=Caenorhabditis elegans, GI17507641, Length=390, Percent_Identity=32.0512820512821, Blast_Score=177, Evalue=7e-45, Organism=Caenorhabditis elegans, GI115532548, Length=354, Percent_Identity=32.7683615819209, Blast_Score=177, Evalue=1e-44, Organism=Caenorhabditis elegans, GI115532546, Length=386, Percent_Identity=31.8652849740933, Blast_Score=176, Evalue=2e-44, Organism=Caenorhabditis elegans, GI32564046, Length=376, Percent_Identity=31.6489361702128, Blast_Score=166, Evalue=2e-41, Organism=Caenorhabditis elegans, GI71982858, Length=363, Percent_Identity=30.8539944903581, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI25148203, Length=446, Percent_Identity=26.9058295964126, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI193206561, Length=355, Percent_Identity=30.4225352112676, Blast_Score=155, Evalue=3e-38, Organism=Caenorhabditis elegans, GI17508543, Length=377, Percent_Identity=28.6472148541114, Blast_Score=155, Evalue=4e-38, Organism=Caenorhabditis elegans, GI71990816, Length=385, Percent_Identity=30.9090909090909, Blast_Score=153, Evalue=2e-37, Organism=Caenorhabditis elegans, GI17556951, Length=342, Percent_Identity=30.7017543859649, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI193208216, Length=373, Percent_Identity=29.4906166219839, Blast_Score=144, Evalue=8e-35, Organism=Caenorhabditis elegans, GI17536099, Length=405, Percent_Identity=29.8765432098765, Blast_Score=121, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17536101, Length=405, Percent_Identity=29.8765432098765, Blast_Score=120, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17553716, Length=363, Percent_Identity=25.6198347107438, Blast_Score=119, Evalue=3e-27, Organism=Caenorhabditis elegans, GI17536103, Length=405, Percent_Identity=29.8765432098765, Blast_Score=118, Evalue=5e-27, Organism=Caenorhabditis elegans, GI71997889, Length=504, Percent_Identity=25.3968253968254, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI25148205, Length=375, Percent_Identity=25.3333333333333, Blast_Score=112, Evalue=3e-25, Organism=Caenorhabditis elegans, GI71987152, Length=104, Percent_Identity=44.2307692307692, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17557982, Length=394, Percent_Identity=24.1116751269036, Blast_Score=100, Evalue=3e-21, Organism=Caenorhabditis elegans, GI25148291, Length=331, Percent_Identity=25.0755287009063, Blast_Score=91, Evalue=9e-19, Organism=Caenorhabditis elegans, GI71982862, Length=209, Percent_Identity=30.622009569378, Blast_Score=88, Evalue=9e-18, Organism=Saccharomyces cerevisiae, GI6323021, Length=356, Percent_Identity=35.1123595505618, Blast_Score=237, Evalue=3e-63, Organism=Saccharomyces cerevisiae, GI6320173, Length=457, Percent_Identity=32.6039387308534, Blast_Score=225, Evalue=1e-59, Organism=Saccharomyces cerevisiae, GI6324217, Length=366, Percent_Identity=36.3387978142077, Blast_Score=222, Evalue=1e-58, Organism=Saccharomyces cerevisiae, GI6323947, Length=371, Percent_Identity=36.1185983827493, Blast_Score=213, Evalue=6e-56, Organism=Saccharomyces cerevisiae, GI6321856, Length=396, Percent_Identity=33.0808080808081, Blast_Score=212, Evalue=1e-55, Organism=Saccharomyces cerevisiae, GI6321360, Length=385, Percent_Identity=33.5064935064935, Blast_Score=207, Evalue=4e-54, Organism=Saccharomyces cerevisiae, GI6325138, Length=378, Percent_Identity=34.3915343915344, Blast_Score=204, Evalue=3e-53, Organism=Saccharomyces cerevisiae, GI6320041, Length=366, Percent_Identity=31.9672131147541, Blast_Score=196, Evalue=8e-51, Organism=Saccharomyces cerevisiae, GI6324778, Length=376, Percent_Identity=33.2446808510638, Blast_Score=192, Evalue=8e-50, Organism=Saccharomyces cerevisiae, GI6320224, Length=370, Percent_Identity=32.972972972973, Blast_Score=190, Evalue=4e-49, Organism=Saccharomyces cerevisiae, GI6320449, Length=416, Percent_Identity=30.7692307692308, Blast_Score=184, Evalue=3e-47, Organism=Saccharomyces cerevisiae, GI6322427, Length=365, Percent_Identity=32.3287671232877, Blast_Score=183, Evalue=5e-47, Organism=Saccharomyces cerevisiae, GI6321963, Length=447, Percent_Identity=31.3199105145414, Blast_Score=182, Evalue=1e-46, Organism=Saccharomyces cerevisiae, GI6321267, Length=447, Percent_Identity=32.662192393736, Blast_Score=180, Evalue=4e-46, Organism=Saccharomyces cerevisiae, GI6319618, Length=411, Percent_Identity=31.1435523114355, Blast_Score=179, Evalue=6e-46, Organism=Saccharomyces cerevisiae, GI6322912, Length=371, Percent_Identity=33.9622641509434, Blast_Score=177, Evalue=3e-45, Organism=Saccharomyces cerevisiae, GI6322323, Length=371, Percent_Identity=33.9622641509434, Blast_Score=177, Evalue=3e-45, Organism=Saccharomyces cerevisiae, GI6321111, Length=358, Percent_Identity=30.7262569832402, Blast_Score=169, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6323306, Length=462, Percent_Identity=29.6536796536797, Blast_Score=167, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6320119, Length=376, Percent_Identity=30.5851063829787, Blast_Score=164, Evalue=4e-41, Organism=Saccharomyces cerevisiae, GI6319714, Length=355, Percent_Identity=30.1408450704225, Blast_Score=156, Evalue=7e-39, Organism=Saccharomyces cerevisiae, GI6324620, Length=388, Percent_Identity=28.0927835051546, Blast_Score=155, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6320400, Length=392, Percent_Identity=28.8265306122449, Blast_Score=153, Evalue=6e-38, Organism=Saccharomyces cerevisiae, GI6324366, Length=401, Percent_Identity=29.6758104738155, Blast_Score=139, Evalue=9e-34, Organism=Saccharomyces cerevisiae, GI6322876, Length=444, Percent_Identity=27.4774774774775, Blast_Score=127, Evalue=4e-30, Organism=Drosophila melanogaster, GI28574962, Length=382, Percent_Identity=36.6492146596859, Blast_Score=234, Evalue=7e-62, Organism=Drosophila melanogaster, GI24584399, Length=356, Percent_Identity=37.0786516853933, Blast_Score=232, Evalue=4e-61, Organism=Drosophila melanogaster, GI21356161, Length=380, Percent_Identity=35.5263157894737, Blast_Score=232, Evalue=5e-61, Organism=Drosophila melanogaster, GI24662330, Length=367, Percent_Identity=36.5122615803815, Blast_Score=229, Evalue=2e-60, Organism=Drosophila melanogaster, GI24644483, Length=360, Percent_Identity=35.2777777777778, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI24644479, Length=360, Percent_Identity=35.2777777777778, Blast_Score=223, Evalue=3e-58, Organism=Drosophila melanogaster, GI281361218, Length=360, Percent_Identity=35.2777777777778, Blast_Score=223, Evalue=3e-58, Organism=Drosophila melanogaster, GI24644481, Length=360, Percent_Identity=35.2777777777778, Blast_Score=223, Evalue=3e-58, Organism=Drosophila melanogaster, GI24644487, Length=360, Percent_Identity=35.2777777777778, Blast_Score=222, Evalue=3e-58, Organism=Drosophila melanogaster, GI45551833, Length=360, Percent_Identity=35.2777777777778, Blast_Score=222, Evalue=3e-58, Organism=Drosophila melanogaster, GI24644485, Length=360, Percent_Identity=35.2777777777778, Blast_Score=222, Evalue=3e-58, Organism=Drosophila melanogaster, GI24585582, Length=368, Percent_Identity=34.7826086956522, Blast_Score=216, Evalue=2e-56, Organism=Drosophila melanogaster, GI21355075, Length=354, Percent_Identity=35.8757062146893, Blast_Score=212, Evalue=5e-55, Organism=Drosophila melanogaster, GI17985987, Length=383, Percent_Identity=34.7258485639687, Blast_Score=210, Evalue=1e-54, Organism=Drosophila melanogaster, GI18857967, Length=361, Percent_Identity=36.01108033241, Blast_Score=209, Evalue=3e-54, Organism=Drosophila melanogaster, GI24642151, Length=348, Percent_Identity=35.0574712643678, Blast_Score=206, Evalue=3e-53, Organism=Drosophila melanogaster, GI24584994, Length=429, Percent_Identity=32.1678321678322, Blast_Score=198, Evalue=5e-51, Organism=Drosophila melanogaster, GI17977678, Length=363, Percent_Identity=32.7823691460055, Blast_Score=197, Evalue=1e-50, Organism=Drosophila melanogaster, GI28575014, Length=363, Percent_Identity=33.3333333333333, Blast_Score=195, Evalue=7e-50, Organism=Drosophila melanogaster, GI28571808, Length=370, Percent_Identity=32.1621621621622, Blast_Score=191, Evalue=1e-48, Organism=Drosophila melanogaster, GI28571809, Length=370, Percent_Identity=32.1621621621622, Blast_Score=191, Evalue=1e-48, Organism=Drosophila melanogaster, GI24583281, Length=367, Percent_Identity=33.2425068119891, Blast_Score=190, Evalue=1e-48, Organism=Drosophila melanogaster, GI24583279, Length=367, Percent_Identity=33.2425068119891, Blast_Score=190, Evalue=1e-48, Organism=Drosophila melanogaster, GI24645031, Length=367, Percent_Identity=32.425068119891, Blast_Score=189, Evalue=4e-48, Organism=Drosophila melanogaster, GI281365720, Length=316, Percent_Identity=35.7594936708861, Blast_Score=186, Evalue=2e-47, Organism=Drosophila melanogaster, GI17136814, Length=395, Percent_Identity=32.6582278481013, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI21355559, Length=372, Percent_Identity=34.6774193548387, Blast_Score=169, Evalue=3e-42, Organism=Drosophila melanogaster, GI24666101, Length=459, Percent_Identity=31.1546840958606, Blast_Score=169, Evalue=4e-42, Organism=Drosophila melanogaster, GI24643725, Length=401, Percent_Identity=31.1720698254364, Blast_Score=167, Evalue=1e-41, Organism=Drosophila melanogaster, GI24642822, Length=368, Percent_Identity=31.25, Blast_Score=167, Evalue=2e-41, Organism=Drosophila melanogaster, GI24582080, Length=367, Percent_Identity=31.8801089918256, Blast_Score=162, Evalue=6e-40, Organism=Drosophila melanogaster, GI24582078, Length=367, Percent_Identity=31.8801089918256, Blast_Score=162, Evalue=6e-40, Organism=Drosophila melanogaster, GI17136248, Length=367, Percent_Identity=31.8801089918256, Blast_Score=162, Evalue=6e-40, Organism=Drosophila melanogaster, GI24582075, Length=367, Percent_Identity=31.8801089918256, Blast_Score=162, Evalue=6e-40, Organism=Drosophila melanogaster, GI24581954, Length=375, Percent_Identity=30.4, Blast_Score=161, Evalue=1e-39, Organism=Drosophila melanogaster, GI24581952, Length=375, Percent_Identity=30.4, Blast_Score=161, Evalue=1e-39, Organism=Drosophila melanogaster, GI24581956, Length=375, Percent_Identity=30.4, Blast_Score=161, Evalue=1e-39, Organism=Drosophila melanogaster, GI20130173, Length=445, Percent_Identity=28.9887640449438, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI17647335, Length=371, Percent_Identity=30.4582210242588, Blast_Score=159, Evalue=5e-39, Organism=Drosophila melanogaster, GI17136666, Length=426, Percent_Identity=29.5774647887324, Blast_Score=153, Evalue=3e-37, Organism=Drosophila melanogaster, GI28571338, Length=455, Percent_Identity=28.5714285714286, Blast_Score=149, Evalue=4e-36, Organism=Drosophila melanogaster, GI18859659, Length=455, Percent_Identity=28.5714285714286, Blast_Score=149, Evalue=4e-36, Organism=Drosophila melanogaster, GI19920478, Length=379, Percent_Identity=29.8153034300792, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI24640164, Length=355, Percent_Identity=27.887323943662, Blast_Score=120, Evalue=3e-27, Organism=Drosophila melanogaster, GI24668515, Length=333, Percent_Identity=26.7267267267267, Blast_Score=102, Evalue=6e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 51051; Mature: 50920
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFEALELDQHLLNAIAKMGHTRPTSIQTLAIPLAMDERDIMASAPTGTGKTLAFLLPAV CCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCHHEECCCCCCCHHHHHHHHHH QRLIDFPRRKGGSARILILTPTRELAVQISGVASALVEGTQLVVGNIIGGVSYQEQEEVI HHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHH TDSVDIVIATPGRLMEYIDSEAFDCREVETLILDEADRMLDMGFIKAMDRIVGETRWRKH HCCCCEEEECCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TALFSATLEGRGLREFCRDVLRNPAQLTAEVSRRESGKILQWVHLADSPEHKLQLLAAIL HHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHH EQPVKEEEQQQKVIVFVKTRDRLTELVAQLAELQIPCTYLRGEMDQEKRNLALNQFRAGN HHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHCCCCC INILIATDVAARGIDVPDITHVINYDMPRSADIYVHRIGRTARGGKKGIAISLIEAHDVD EEEEEEECHHHCCCCCCCHHHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCHH MLAKVERYTDQIIKRRVVKTLRPTHKEAQPSQRKTKNNVNKKSKNREEELKKEQKAKRLK HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHCCHHHHHHHHHHHHHHH KKEDMGKQRHRNIKAKGKPSWAGKGKTENKTEE HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SFEALELDQHLLNAIAKMGHTRPTSIQTLAIPLAMDERDIMASAPTGTGKTLAFLLPAV CCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCHHEECCCCCCCHHHHHHHHHH QRLIDFPRRKGGSARILILTPTRELAVQISGVASALVEGTQLVVGNIIGGVSYQEQEEVI HHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHH TDSVDIVIATPGRLMEYIDSEAFDCREVETLILDEADRMLDMGFIKAMDRIVGETRWRKH HCCCCEEEECCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TALFSATLEGRGLREFCRDVLRNPAQLTAEVSRRESGKILQWVHLADSPEHKLQLLAAIL HHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHH EQPVKEEEQQQKVIVFVKTRDRLTELVAQLAELQIPCTYLRGEMDQEKRNLALNQFRAGN HHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHCCCCC INILIATDVAARGIDVPDITHVINYDMPRSADIYVHRIGRTARGGKKGIAISLIEAHDVD EEEEEEECHHHCCCCCCCHHHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCHH MLAKVERYTDQIIKRRVVKTLRPTHKEAQPSQRKTKNNVNKKSKNREEELKKEQKAKRLK HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHCCHHHHHHHHHHHHHHH KKEDMGKQRHRNIKAKGKPSWAGKGKTENKTEE HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]