| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is fbpB2 [H]
Identifier: 119946627
GI number: 119946627
Start: 3705901
End: 3707532
Strand: Reverse
Name: fbpB2 [H]
Synonym: Ping_3006
Alternate gene names: 119946627
Gene position: 3707532-3705901 (Counterclockwise)
Preceding gene: 119946628
Following gene: 119946626
Centisome position: 81.31
GC content: 41.48
Gene sequence:
>1632_bases TTGATCTCTAGAATAAATCTTTACAAGTTACTGCCATGGGCAGTAACTTGCCTTTTAATTACGCCCATATTAGCACTTAT TTTAAGTGCTTTTCAGATCGATGATAGTGGTAGTTTTCAACACTTAATTGATACAGTATTGTGGGATTACAGTTTAAATA CATTACTTATGGTTTTAGGAGTGATTACTTTAAGTTGTATTTTTGCACTGCCCGTTGCCTGGTTTGTTGCCTGTTGCGAA TTCCCCGGTCGTAGCATTCTGCAGTGGGCATTAATGCTACCGCTGGCTCTTCCGCCTTATATCATTGCCATTGTATACAC TGACTTGATGGACTTTTCAGGTCCAGTGCAGCATTTTTTACGTGCATTAATGGGCTGGCAACAGACATCTGATTATTATT TTCCCGATATTCGTACTATTTCCGGCGCCATCATTATTTTAAGCTTAGCGCTCTATCCTTATTTATATTTGTTATTGCGG GGTGCTTTTTTAGGTCAATCGGGTGGATTATTTCAAGCTGCCCGTACTCTGGGCTTATCACCTATGCGTGCTTTTTTACG TGTCTCCTTACCGCTTTCTCGTACTGCTCTTGCGGTGGGATTATCATTAATTGCGATGGAAACATTGGGTGATTTTGCAA CAGTTCATTATTTTTCAGTCAGCACCTTAACCACGGCCGTTTATAATACCTGGCTAGAGTTAGGCAGTTTGACGACCGCT GCAAAAATATCATCACTGATGTTATTGGCTCTGGTTATTTTAATCAGTCTCGAAAATTACAGCCGCCGCAGACAAAAATT ATACCAAGGTAGTGGTTCAACCCATACCGAGTTACGTTTTGTTTTACAGGGCTGGCAGAAGTGGGGTGTATTAAGCTTTT CCTGGGGACTGTTATTTTTTGCTTTTATTCTGCCTTTAGCGGTTTTGTTTTATTATGCGAGCCTCTATTTCAGCCAGTCA TTTAACCTTTCTTTATGGAAATACACCCTAAACAGTGTTTGGCTGGCAACCATTGTTGCCTCTTTAGCACTATTAATCGC ATTAATTGTTAATTTCTACCAGCGCTTATCACCGGGAGTATCGGCTAAAGCTACAATACGATTATCCTCTTTAGGTTATG CACTGCCCGGTACCGTAGTTGCGATCGCAGTGCTTATTCCCTTCACCAGTTTAGATTTGTGGCTCAACAGACAGCTTGTT GAGTATGGTTATTCAAGAGTAGGGCTGCTGTTTTCCGGTACGCTGTTCATTTTAGTGGCCGGTTATTTAGTGCGCTTTAG TGCGATAGCCGTTGGTAGTATCGACAGCAGTCTGGCTCAAGTTTCTCCGTCATTGGACAGTGCCTCGCGTACGCTTGGGC AAAGTGCGGCACAAACCATTCGCCGCGTTGATTTGCCGTTAATCACAAGAGGAATGTTAAGTGCCTTTATTTTGGTTTTT ATCGAGGCTATGAAAGAACTGCCTACGGCTTTATTATTGCGCCCGTTTAATTTTGAAACGCTGGCAACTTATGCTTATCA ATTTGTTTCTGATGAGATGATAGAATATGCAGCCTTACCCGCTTTATTAATTGTTTTAATAGGGCTTGTGCCTTTTATTG TTGTCAGCCGTTTAATGGAGAAATCCTCTTAA
Upstream 100 bases:
>100_bases TTAGTCGGATCATGGGGCGAATTCAAAGCAGATTCCATTTCGCTTTCTGATATTGCCAAGCAGCATCGAACAGCCGTTAA GTTACTGGATGAAGTGAAAT
Downstream 100 bases:
>100_bases TGTCCACCCTTATTGTTAATAAATTAAGTTGTTTTTATCAAAAGAACCAAGTGCTTAATTCTCTGGATTTAGAACTCGCA AATAATGAAATAGTGTGTTT
Product: iron(III) ABC transporter, inner membrane binding component
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: Iron(III)-transport system permease protein fbpB 2 [H]
Number of amino acids: Translated: 543; Mature: 543
Protein sequence:
>543_residues MISRINLYKLLPWAVTCLLITPILALILSAFQIDDSGSFQHLIDTVLWDYSLNTLLMVLGVITLSCIFALPVAWFVACCE FPGRSILQWALMLPLALPPYIIAIVYTDLMDFSGPVQHFLRALMGWQQTSDYYFPDIRTISGAIIILSLALYPYLYLLLR GAFLGQSGGLFQAARTLGLSPMRAFLRVSLPLSRTALAVGLSLIAMETLGDFATVHYFSVSTLTTAVYNTWLELGSLTTA AKISSLMLLALVILISLENYSRRRQKLYQGSGSTHTELRFVLQGWQKWGVLSFSWGLLFFAFILPLAVLFYYASLYFSQS FNLSLWKYTLNSVWLATIVASLALLIALIVNFYQRLSPGVSAKATIRLSSLGYALPGTVVAIAVLIPFTSLDLWLNRQLV EYGYSRVGLLFSGTLFILVAGYLVRFSAIAVGSIDSSLAQVSPSLDSASRTLGQSAAQTIRRVDLPLITRGMLSAFILVF IEAMKELPTALLLRPFNFETLATYAYQFVSDEMIEYAALPALLIVLIGLVPFIVVSRLMEKSS
Sequences:
>Translated_543_residues MISRINLYKLLPWAVTCLLITPILALILSAFQIDDSGSFQHLIDTVLWDYSLNTLLMVLGVITLSCIFALPVAWFVACCE FPGRSILQWALMLPLALPPYIIAIVYTDLMDFSGPVQHFLRALMGWQQTSDYYFPDIRTISGAIIILSLALYPYLYLLLR GAFLGQSGGLFQAARTLGLSPMRAFLRVSLPLSRTALAVGLSLIAMETLGDFATVHYFSVSTLTTAVYNTWLELGSLTTA AKISSLMLLALVILISLENYSRRRQKLYQGSGSTHTELRFVLQGWQKWGVLSFSWGLLFFAFILPLAVLFYYASLYFSQS FNLSLWKYTLNSVWLATIVASLALLIALIVNFYQRLSPGVSAKATIRLSSLGYALPGTVVAIAVLIPFTSLDLWLNRQLV EYGYSRVGLLFSGTLFILVAGYLVRFSAIAVGSIDSSLAQVSPSLDSASRTLGQSAAQTIRRVDLPLITRGMLSAFILVF IEAMKELPTALLLRPFNFETLATYAYQFVSDEMIEYAALPALLIVLIGLVPFIVVSRLMEKSS >Mature_543_residues MISRINLYKLLPWAVTCLLITPILALILSAFQIDDSGSFQHLIDTVLWDYSLNTLLMVLGVITLSCIFALPVAWFVACCE FPGRSILQWALMLPLALPPYIIAIVYTDLMDFSGPVQHFLRALMGWQQTSDYYFPDIRTISGAIIILSLALYPYLYLLLR GAFLGQSGGLFQAARTLGLSPMRAFLRVSLPLSRTALAVGLSLIAMETLGDFATVHYFSVSTLTTAVYNTWLELGSLTTA AKISSLMLLALVILISLENYSRRRQKLYQGSGSTHTELRFVLQGWQKWGVLSFSWGLLFFAFILPLAVLFYYASLYFSQS FNLSLWKYTLNSVWLATIVASLALLIALIVNFYQRLSPGVSAKATIRLSSLGYALPGTVVAIAVLIPFTSLDLWLNRQLV EYGYSRVGLLFSGTLFILVAGYLVRFSAIAVGSIDSSLAQVSPSLDSASRTLGQSAAQTIRRVDLPLITRGMLSAFILVF IEAMKELPTALLLRPFNFETLATYAYQFVSDEMIEYAALPALLIVLIGLVPFIVVSRLMEKSS
Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1178
COG function: function code P; ABC-type Fe3+ transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transmembrane type-1 domains [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=270, Percent_Identity=25.5555555555556, Blast_Score=69, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 60121; Mature: 60121
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISRINLYKLLPWAVTCLLITPILALILSAFQIDDSGSFQHLIDTVLWDYSLNTLLMVLG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH VITLSCIFALPVAWFVACCEFPGRSILQWALMLPLALPPYIIAIVYTDLMDFSGPVQHFL HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHH RALMGWQQTSDYYFPDIRTISGAIIILSLALYPYLYLLLRGAFLGQSGGLFQAARTLGLS HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCH PMRAFLRVSLPLSRTALAVGLSLIAMETLGDFATVHYFSVSTLTTAVYNTWLELGSLTTA HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH AKISSLMLLALVILISLENYSRRRQKLYQGSGSTHTELRFVLQGWQKWGVLSFSWGLLFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH AFILPLAVLFYYASLYFSQSFNLSLWKYTLNSVWLATIVASLALLIALIVNFYQRLSPGV HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SAKATIRLSSLGYALPGTVVAIAVLIPFTSLDLWLNRQLVEYGYSRVGLLFSGTLFILVA CCEEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH GYLVRFSAIAVGSIDSSLAQVSPSLDSASRTLGQSAAQTIRRVDLPLITRGMLSAFILVF HHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH IEAMKELPTALLLRPFNFETLATYAYQFVSDEMIEYAALPALLIVLIGLVPFIVVSRLME HHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KSS CCC >Mature Secondary Structure MISRINLYKLLPWAVTCLLITPILALILSAFQIDDSGSFQHLIDTVLWDYSLNTLLMVLG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH VITLSCIFALPVAWFVACCEFPGRSILQWALMLPLALPPYIIAIVYTDLMDFSGPVQHFL HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHH RALMGWQQTSDYYFPDIRTISGAIIILSLALYPYLYLLLRGAFLGQSGGLFQAARTLGLS HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCH PMRAFLRVSLPLSRTALAVGLSLIAMETLGDFATVHYFSVSTLTTAVYNTWLELGSLTTA HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH AKISSLMLLALVILISLENYSRRRQKLYQGSGSTHTELRFVLQGWQKWGVLSFSWGLLFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH AFILPLAVLFYYASLYFSQSFNLSLWKYTLNSVWLATIVASLALLIALIVNFYQRLSPGV HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SAKATIRLSSLGYALPGTVVAIAVLIPFTSLDLWLNRQLVEYGYSRVGLLFSGTLFILVA CCEEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH GYLVRFSAIAVGSIDSSLAQVSPSLDSASRTLGQSAAQTIRRVDLPLITRGMLSAFILVF HHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH IEAMKELPTALLLRPFNFETLATYAYQFVSDEMIEYAALPALLIVLIGLVPFIVVSRLME HHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KSS CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800; 7927717 [H]