| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is 119946621
Identifier: 119946621
GI number: 119946621
Start: 3696762
End: 3697226
Strand: Reverse
Name: 119946621
Synonym: Ping_3000
Alternate gene names: NA
Gene position: 3697226-3696762 (Counterclockwise)
Preceding gene: 119946623
Following gene: 119946620
Centisome position: 81.09
GC content: 40.0
Gene sequence:
>465_bases ATGGACAGTAACATTATGTTGTTGATGCATCCCATGACCGGAGTGCTTGCCATTCTGTGCGCATTATGGGTTTTTGTTGA TACGCTGAATGTTAGTGAGGCCTCTGTAACACGGATAAAAAATGTAAGTATTCTTTGCTCTATACTGATCTGGCTAACAT ATATAGTTGGAGGATATTGGTATGTGGTGTATTACGGCATTGACAAAGAAATCATAAAATCCGGGCCATGGCCTTTTGCT CATAATATATTTATGGAAATTAAAGAGCATGTTTTTCTGATGCTTCTTTTGTTAGGCACTTATCTTCCAATTGCCGCAAA CAAAAATATCGCCGTCAGCAAGCCAGCACGCAAGATTCTTCTATGGGTATCAGGCTTCATTATTCCAATCTCCCTGTTTA TGGAAGGTTCCGGTGCCATCATTTCCAGTGCGGTTAAAATCGGGCTGCTATTTAAACTGTCATAA
Upstream 100 bases:
>100_bases TGGGTAGAAGACTGCTTGCTGTTTTTATCTGCTCATATTTTTTTTTGTTACTATACTGTTAAAAACAGCAAACTTATTCA ATTTCCGAAGGAGAAATAAA
Downstream 100 bases:
>100_bases AGAGGTGAATCATGGAAAAAACAGAAATTGGAAAATATACCAGAAGTTTTGGTTTGTCTTTTAGCATTACCAGTGTTTTC AGCGCTGTTCTTGTTACTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MDSNIMLLMHPMTGVLAILCALWVFVDTLNVSEASVTRIKNVSILCSILIWLTYIVGGYWYVVYYGIDKEIIKSGPWPFA HNIFMEIKEHVFLMLLLLGTYLPIAANKNIAVSKPARKILLWVSGFIIPISLFMEGSGAIISSAVKIGLLFKLS
Sequences:
>Translated_154_residues MDSNIMLLMHPMTGVLAILCALWVFVDTLNVSEASVTRIKNVSILCSILIWLTYIVGGYWYVVYYGIDKEIIKSGPWPFA HNIFMEIKEHVFLMLLLLGTYLPIAANKNIAVSKPARKILLWVSGFIIPISLFMEGSGAIISSAVKIGLLFKLS >Mature_154_residues MDSNIMLLMHPMTGVLAILCALWVFVDTLNVSEASVTRIKNVSILCSILIWLTYIVGGYWYVVYYGIDKEIIKSGPWPFA HNIFMEIKEHVFLMLLLLGTYLPIAANKNIAVSKPARKILLWVSGFIIPISLFMEGSGAIISSAVKIGLLFKLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17179; Mature: 17179
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSNIMLLMHPMTGVLAILCALWVFVDTLNVSEASVTRIKNVSILCSILIWLTYIVGGYW CCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEE YVVYYGIDKEIIKSGPWPFAHNIFMEIKEHVFLMLLLLGTYLPIAANKNIAVSKPARKIL EEEEECCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHH LWVSGFIIPISLFMEGSGAIISSAVKIGLLFKLS HHHHHHHHHHHHEECCCCHHHHHHHHHHEEEEEC >Mature Secondary Structure MDSNIMLLMHPMTGVLAILCALWVFVDTLNVSEASVTRIKNVSILCSILIWLTYIVGGYW CCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEE YVVYYGIDKEIIKSGPWPFAHNIFMEIKEHVFLMLLLLGTYLPIAANKNIAVSKPARKIL EEEEECCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHH LWVSGFIIPISLFMEGSGAIISSAVKIGLLFKLS HHHHHHHHHHHHEECCCCHHHHHHHHHHEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA