| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946568
Identifier: 119946568
GI number: 119946568
Start: 3632131
End: 3632796
Strand: Reverse
Name: 119946568
Synonym: Ping_2947
Alternate gene names: NA
Gene position: 3632796-3632131 (Counterclockwise)
Preceding gene: 119946569
Following gene: 119946566
Centisome position: 79.67
GC content: 39.04
Gene sequence:
>666_bases ATGATTGGAACTAACTACACAAACAAGCTTCCTAAAGTGATTAGTGAAGCTATGAAGCAAGTGTCTAGTGATGATTGTTA TCTTATTAAACGTCGCATTAAAGGTGTAACTGGAACGGGCGCAGTGCTGAATTGTCACCAAAACGTACAAGACTTAGTTG ACAGAATTGGTGGTGAGCGAATTGGTGGTTGGCTGTTGATGCGTAGGAAAGAGCTTTACCGTCATGGTATGTACATTTGG ATGTTTCATAGTATTTGGAAAACTCCAGAAGGTGAGTATGTAGATGTTACGCAAAGCGATGTGTATGGAAATGAGAAAAT TGCAACATTCTGGTATGACGCAAAGCGAAATGCGGACTTAATTGAAGGCACAGCTCACAATCACATTATCTCTTTGGAAA ATGAAAAAGCTGTACAATATATCGCTAAAGCAACTAACACACGTTTAACATTGGGTGCGCCGTATTGGACAGAAAGCAGT GTTCGTTACTTCACTCAATTAGATGAACATAACGGAGTGTATCGTATGTTAAATAGTGATTATCCACAGAACACAAAGAT GTTAGAGGAGCAATACAATTGCCGTTCTGAAGGCAATAGATTGGTGCCAAACAGTAAAGATGACAAAGTATCCACACAGA TATTCTTTGACTTCTCTGTTAGCTAA
Upstream 100 bases:
>100_bases GACGTACTATCACTTGAACGATGAAATACGCTTAACCAACGCTGTAGCTGACTACAGACGTAACGCAGATGGCACTATTG AAGTGCTTTAAGGAGTGAGA
Downstream 100 bases:
>100_bases TCAACTCTGCTGCGTTACGTTTCATCTCATCATTAACTGTAACGTAACGCTGCGTTGTTTGAATGCTTCTGTGTCCAGCC ATATCCGCTAGTACAAACAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MIGTNYTNKLPKVISEAMKQVSSDDCYLIKRRIKGVTGTGAVLNCHQNVQDLVDRIGGERIGGWLLMRRKELYRHGMYIW MFHSIWKTPEGEYVDVTQSDVYGNEKIATFWYDAKRNADLIEGTAHNHIISLENEKAVQYIAKATNTRLTLGAPYWTESS VRYFTQLDEHNGVYRMLNSDYPQNTKMLEEQYNCRSEGNRLVPNSKDDKVSTQIFFDFSVS
Sequences:
>Translated_221_residues MIGTNYTNKLPKVISEAMKQVSSDDCYLIKRRIKGVTGTGAVLNCHQNVQDLVDRIGGERIGGWLLMRRKELYRHGMYIW MFHSIWKTPEGEYVDVTQSDVYGNEKIATFWYDAKRNADLIEGTAHNHIISLENEKAVQYIAKATNTRLTLGAPYWTESS VRYFTQLDEHNGVYRMLNSDYPQNTKMLEEQYNCRSEGNRLVPNSKDDKVSTQIFFDFSVS >Mature_221_residues MIGTNYTNKLPKVISEAMKQVSSDDCYLIKRRIKGVTGTGAVLNCHQNVQDLVDRIGGERIGGWLLMRRKELYRHGMYIW MFHSIWKTPEGEYVDVTQSDVYGNEKIATFWYDAKRNADLIEGTAHNHIISLENEKAVQYIAKATNTRLTLGAPYWTESS VRYFTQLDEHNGVYRMLNSDYPQNTKMLEEQYNCRSEGNRLVPNSKDDKVSTQIFFDFSVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25554; Mature: 25554
Theoretical pI: Translated: 7.59; Mature: 7.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGTNYTNKLPKVISEAMKQVSSDDCYLIKRRIKGVTGTGAVLNCHQNVQDLVDRIGGER CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHCCCH IGGWLLMRRKELYRHGMYIWMFHSIWKTPEGEYVDVTQSDVYGNEKIATFWYDAKRNADL HHHHHHHHHHHHHHCCCCEEEEHHHHCCCCCCEEECCCCCCCCCCEEEEEEECCCCCCCC IEGTAHNHIISLENEKAVQYIAKATNTRLTLGAPYWTESSVRYFTQLDEHNGVYRMLNSD CCCCCCCEEEEECCHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEECCCC YPQNTKMLEEQYNCRSEGNRLVPNSKDDKVSTQIFFDFSVS CCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECC >Mature Secondary Structure MIGTNYTNKLPKVISEAMKQVSSDDCYLIKRRIKGVTGTGAVLNCHQNVQDLVDRIGGER CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHCCCH IGGWLLMRRKELYRHGMYIWMFHSIWKTPEGEYVDVTQSDVYGNEKIATFWYDAKRNADL HHHHHHHHHHHHHHCCCCEEEEHHHHCCCCCCEEECCCCCCCCCCEEEEEEECCCCCCCC IEGTAHNHIISLENEKAVQYIAKATNTRLTLGAPYWTESSVRYFTQLDEHNGVYRMLNSD CCCCCCCEEEEECCHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEECCCC YPQNTKMLEEQYNCRSEGNRLVPNSKDDKVSTQIFFDFSVS CCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA