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The map label for this gene is 119946555

Identifier: 119946555

GI number: 119946555

Start: 3618599

End: 3619162

Strand: Direct

Name: 119946555

Synonym: Ping_2934

Alternate gene names: NA

Gene position: 3618599-3619162 (Clockwise)

Preceding gene: 119946554

Following gene: 119946556

Centisome position: 79.36

GC content: 40.96

Gene sequence:

>564_bases
ATGTCTATTAAACACCCCGTACCGGATCATCAACCCCCCGAAGATGAACAACCTAAAAACAAACTGGACGCCACTATTAT
CAATGCAGGCAACTGGCTCAGTTTACTGTTTATCTTTACCGTTTTTATCTCTTTTTATGAGGTTGTGATGCGCTATGCTT
TTGACTCACCTACTATCTGGGTGCATGAGACAGCTTCATTTATTGGTGCTTCTTTATTCGTCATTGGCGGATTATATGCC
TTTGCTGCCGACAAACATGTGCGTGTTGTTCTGATCTATGATCTTGTTTCACAGCGTACCCGTCACTACCTTAACTTAGT
GCATCATATAATAGGCATCACTTTCTCCGCATTCATGACTTATGGTGCTTATACCTTAGCAAAAAATGCCTGGTTTTCCC
CCTCGGGTGAATTACGTCTAAACACCTCCGGCAGCGCCTGGAATCCCCCTTTTCCTGCTCTATTAAAAGCAATTATTGTT
ATTGCCTTTTGTATTCTTACTATTCAATTTTTACTGCATTTGATTGCTGAAATCAAAGTGCTAAGGAAGCATTCTCATGT
TTGA

Upstream 100 bases:

>100_bases
TCAGTGACCAGCTTCTTAGGTGATAACGGTCTACTGTAAGCCGCTGTTTAACTCATTATGCAAGGGTTGATGCAACCCTT
GCCCACTCTGGAAATGCATT

Downstream 100 bases:

>100_bases
TTTATCCGCTATTGGCATAGGCTATGGCAGTTTATTAATGTTAGTGATGATGATAGCCCTGCTGTTAACCGGCATGCAGC
TTGCGTTTGTGACCGGTTTT

Product: tripartite ATP-independent periplasmic transporter DctQ

Products: NA

Alternate protein names: TRAP Transporter DctQ-Like Membrane Protein; Trap Dicarboxylate Family Transporter Dctq Subunit; Trap Dicarboxylate Transporter Dctq Subunit; TRAP Dicarboxylate Transporter DctQ Subunit; TRAP Dicarboxylate Family Transporter DctQ Subunit; TRAP Transporter Small Transmembrane Protein; TRAP Transporter DctM Subunit Subfamily

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MSIKHPVPDHQPPEDEQPKNKLDATIINAGNWLSLLFIFTVFISFYEVVMRYAFDSPTIWVHETASFIGASLFVIGGLYA
FAADKHVRVVLIYDLVSQRTRHYLNLVHHIIGITFSAFMTYGAYTLAKNAWFSPSGELRLNTSGSAWNPPFPALLKAIIV
IAFCILTIQFLLHLIAEIKVLRKHSHV

Sequences:

>Translated_187_residues
MSIKHPVPDHQPPEDEQPKNKLDATIINAGNWLSLLFIFTVFISFYEVVMRYAFDSPTIWVHETASFIGASLFVIGGLYA
FAADKHVRVVLIYDLVSQRTRHYLNLVHHIIGITFSAFMTYGAYTLAKNAWFSPSGELRLNTSGSAWNPPFPALLKAIIV
IAFCILTIQFLLHLIAEIKVLRKHSHV
>Mature_186_residues
SIKHPVPDHQPPEDEQPKNKLDATIINAGNWLSLLFIFTVFISFYEVVMRYAFDSPTIWVHETASFIGASLFVIGGLYAF
AADKHVRVVLIYDLVSQRTRHYLNLVHHIIGITFSAFMTYGAYTLAKNAWFSPSGELRLNTSGSAWNPPFPALLKAIIVI
AFCILTIQFLLHLIAEIKVLRKHSHV

Specific function: Unknown

COG id: COG4665

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21153; Mature: 21022

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKHPVPDHQPPEDEQPKNKLDATIINAGNWLSLLFIFTVFISFYEVVMRYAFDSPTIW
CCCCCCCCCCCCCCCCCCHHHHCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
VHETASFIGASLFVIGGLYAFAADKHVRVVLIYDLVSQRTRHYLNLVHHIIGITFSAFMT
EEHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGAYTLAKNAWFSPSGELRLNTSGSAWNPPFPALLKAIIVIAFCILTIQFLLHLIAEIKV
HHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRKHSHV
HHHHCCC
>Mature Secondary Structure 
SIKHPVPDHQPPEDEQPKNKLDATIINAGNWLSLLFIFTVFISFYEVVMRYAFDSPTIW
CCCCCCCCCCCCCCCCCHHHHCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
VHETASFIGASLFVIGGLYAFAADKHVRVVLIYDLVSQRTRHYLNLVHHIIGITFSAFMT
EEHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGAYTLAKNAWFSPSGELRLNTSGSAWNPPFPALLKAIIVIAFCILTIQFLLHLIAEIKV
HHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRKHSHV
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA