| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946543
Identifier: 119946543
GI number: 119946543
Start: 3604669
End: 3605109
Strand: Reverse
Name: 119946543
Synonym: Ping_2922
Alternate gene names: NA
Gene position: 3605109-3604669 (Counterclockwise)
Preceding gene: 119946544
Following gene: 119946542
Centisome position: 79.07
GC content: 30.84
Gene sequence:
>441_bases GTGGATAAAAATATAGATAAAGCTGTTTCTTTGATTCACACAGTAAAAAAATGGATGTCGTTTATTGTTCTTATTTTGAT GACAATAATTGTCGCTATCTCGATAGTAGAGCTTGGTATAGTGCTTTATGTAGATTTATTTGATCCGACAGATGGTGTGC TTTTTCTTGAAATAGATGAATTGTTTAGAATATTTGGCTTCTTTTTTATTATTCTTATTGGATTCGAGCTTGTAGAGACA GTAGAGATGTATTTCAAAGATAATGTCATACATGCTGAGGTTGTTTTATTAGTAGCAGTTATAGCTGTTTCTCGGAAGGT GATTTTATTAGATCTAGAAAAATATGATCCCTTAGCAATAGTAGGCTTAGGCATTATTATTATCGCTTTAGGAGCTTGTT ATTGGTTTATCAAGTTGAGTTATAGAGGTAAAGATAAATAA
Upstream 100 bases:
>100_bases GTGTTTCGCCTTGTTGCTTTTTTAAAGGCGAGTGAGGTTAGAATTTGGCTGAGAGAGTAATTCTACAGCCTCGTTATACA AATATTGGAGTATGTAATTA
Downstream 100 bases:
>100_bases CAATACCTGAGTAATGGAGAACAGCTATACCTTTTTTATTGAGCTTCTAGTTTTGAGCTTCCAGCCCGTGGCCCGCAACT CTTTGCTCGCAGCTCTTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MDKNIDKAVSLIHTVKKWMSFIVLILMTIIVAISIVELGIVLYVDLFDPTDGVLFLEIDELFRIFGFFFIILIGFELVET VEMYFKDNVIHAEVVLLVAVIAVSRKVILLDLEKYDPLAIVGLGIIIIALGACYWFIKLSYRGKDK
Sequences:
>Translated_146_residues MDKNIDKAVSLIHTVKKWMSFIVLILMTIIVAISIVELGIVLYVDLFDPTDGVLFLEIDELFRIFGFFFIILIGFELVET VEMYFKDNVIHAEVVLLVAVIAVSRKVILLDLEKYDPLAIVGLGIIIIALGACYWFIKLSYRGKDK >Mature_146_residues MDKNIDKAVSLIHTVKKWMSFIVLILMTIIVAISIVELGIVLYVDLFDPTDGVLFLEIDELFRIFGFFFIILIGFELVET VEMYFKDNVIHAEVVLLVAVIAVSRKVILLDLEKYDPLAIVGLGIIIIALGACYWFIKLSYRGKDK
Specific function: Unknown
COG id: COG3431
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16599; Mature: 16599
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKNIDKAVSLIHTVKKWMSFIVLILMTIIVAISIVELGIVLYVDLFDPTDGVLFLEIDE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEHHH LFRIFGFFFIILIGFELVETVEMYFKDNVIHAEVVLLVAVIAVSRKVILLDLEKYDPLAI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHH VGLGIIIIALGACYWFIKLSYRGKDK HHHHHHHHHHHHHHHHHHEECCCCCC >Mature Secondary Structure MDKNIDKAVSLIHTVKKWMSFIVLILMTIIVAISIVELGIVLYVDLFDPTDGVLFLEIDE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEHHH LFRIFGFFFIILIGFELVETVEMYFKDNVIHAEVVLLVAVIAVSRKVILLDLEKYDPLAI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHH VGLGIIIIALGACYWFIKLSYRGKDK HHHHHHHHHHHHHHHHHHEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA