| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is 119946537
Identifier: 119946537
GI number: 119946537
Start: 3597320
End: 3597895
Strand: Reverse
Name: 119946537
Synonym: Ping_2914
Alternate gene names: NA
Gene position: 3597895-3597320 (Counterclockwise)
Preceding gene: 119946539
Following gene: 119946532
Centisome position: 78.91
GC content: 37.67
Gene sequence:
>576_bases ATGAATCCAATAAAAATCACAATAGATTATCTGCGCGAAAGGCAGTCTTTTACCGTTTTAGTTCTCCATATCACAATATT AATCTTAGTGTTAAGCCAGATACTGGTTAGTGATTTTATGGGCTTTAATGAGGCGGGGGAAATTAGTCAAAATACCCTCG ATTTTTACGGGACATGGATACATATCATTACTGGGTTATCTCTTATTCCAATTACCCTGATTTTTATTGCTGTGGAAATA AAAAAACAGGGTGTTAAACACTTCTTTCCTTATCTATTTAGTGATTTTTCACAATTAAAAAGTGATCTATTCGAACTGCG GAAATTTAAAATTCCAGAAGTGAAAACGGGTGGTTTAGGCGCTATCATAGAAGGGCTTGGTTTGGGCGCTTTGTCTTTGG TTCTTTTGTCAGGCTCGGCTTGGTATCTGTCATGGAATTTAAACGGAGCTTGGACTCATAATATAAAAGATATCCACGAA CTTTTCACCGGATTAGTTCAAGCCTATGTTATCGGACACGGCTGCATGGGGCTTATACATATTTTTATGGGCAGATGGAA TCACGGACGCAGTTAA
Upstream 100 bases:
>100_bases TGTGCTAAAAAAAGCGCCAACCATGCTCAGATGTTTGTAGCATTAGCGGGATCGAATCATATAGTGCATCAATAATTCTT AATCAAGGCAAGTGAAGTAT
Downstream 100 bases:
>100_bases GCAAATATTTTTAAGTGGAGAAAAAGCAGCCAGTGCCATTCAGACATGACCTTTATTCTTCTTAATTATCTGGAATAGCT GCTATACATCGTTTTTATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MNPIKITIDYLRERQSFTVLVLHITILILVLSQILVSDFMGFNEAGEISQNTLDFYGTWIHIITGLSLIPITLIFIAVEI KKQGVKHFFPYLFSDFSQLKSDLFELRKFKIPEVKTGGLGAIIEGLGLGALSLVLLSGSAWYLSWNLNGAWTHNIKDIHE LFTGLVQAYVIGHGCMGLIHIFMGRWNHGRS
Sequences:
>Translated_191_residues MNPIKITIDYLRERQSFTVLVLHITILILVLSQILVSDFMGFNEAGEISQNTLDFYGTWIHIITGLSLIPITLIFIAVEI KKQGVKHFFPYLFSDFSQLKSDLFELRKFKIPEVKTGGLGAIIEGLGLGALSLVLLSGSAWYLSWNLNGAWTHNIKDIHE LFTGLVQAYVIGHGCMGLIHIFMGRWNHGRS >Mature_191_residues MNPIKITIDYLRERQSFTVLVLHITILILVLSQILVSDFMGFNEAGEISQNTLDFYGTWIHIITGLSLIPITLIFIAVEI KKQGVKHFFPYLFSDFSQLKSDLFELRKFKIPEVKTGGLGAIIEGLGLGALSLVLLSGSAWYLSWNLNGAWTHNIKDIHE LFTGLVQAYVIGHGCMGLIHIFMGRWNHGRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21505; Mature: 21505
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPIKITIDYLRERQSFTVLVLHITILILVLSQILVSDFMGFNEAGEISQNTLDFYGTWI CCCCEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH HIITGLSLIPITLIFIAVEIKKQGVKHFFPYLFSDFSQLKSDLFELRKFKIPEVKTGGLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH AIIEGLGLGALSLVLLSGSAWYLSWNLNGAWTHNIKDIHELFTGLVQAYVIGHGCMGLIH HHHHHHCHHHHHHHHHCCCEEEEEEECCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHH IFMGRWNHGRS HHHHCCCCCCC >Mature Secondary Structure MNPIKITIDYLRERQSFTVLVLHITILILVLSQILVSDFMGFNEAGEISQNTLDFYGTWI CCCCEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH HIITGLSLIPITLIFIAVEIKKQGVKHFFPYLFSDFSQLKSDLFELRKFKIPEVKTGGLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH AIIEGLGLGALSLVLLSGSAWYLSWNLNGAWTHNIKDIHELFTGLVQAYVIGHGCMGLIH HHHHHHCHHHHHHHHHCCCEEEEEEECCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHH IFMGRWNHGRS HHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA