| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946520
Identifier: 119946520
GI number: 119946520
Start: 3574897
End: 3575268
Strand: Reverse
Name: 119946520
Synonym: Ping_2897
Alternate gene names: NA
Gene position: 3575268-3574897 (Counterclockwise)
Preceding gene: 119946521
Following gene: 119946510
Centisome position: 78.41
GC content: 37.63
Gene sequence:
>372_bases ATGGAATTTGAATTTAGAAAAGATTTTTTTAGTGACCAGGCGACTGTAAAGTTATCGATGGATCATGAAGCTTTTGCCAC TTGGTTAGAGCAGGAGGGGCAGTCTATCCCTTGGGTCGAAGCGCTGTTAGTTAATATTTCAGCGGTGCAAAAGCGCGTGG TGACTGATTTTAAATTAGTCGGCAGCGAGTTTTCGTTGTTACTCAATAATGACGAAGCTCAAGTTATTAATCATAGTTTG TTAAATGATTTTGATGAGGTTGATTTAGAAGGAGACTTATCATTTTATGACTTGGAGATTGAAGCATCCTGTGGATTCGA TGATTTTAAGAACTTCATCGAATCATGGTCAGAATTTTTACACAGCCAATAA
Upstream 100 bases:
>100_bases ACTAAAACATCGTTTTATATCTCACCAGGATGTGTTTTAAGCTGTATAAATAAACAGAAAATGAATGGATTTGGTATAAC CTATAGGTTTGAAATAAAGT
Downstream 100 bases:
>100_bases AATTATACTTTTAATACTATTATGATTTAGATGATTTAGATGATTTAGATGATTTTATGAATTCATTAAAGCAAATTATG GTTATCATTTTTACACAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MEFEFRKDFFSDQATVKLSMDHEAFATWLEQEGQSIPWVEALLVNISAVQKRVVTDFKLVGSEFSLLLNNDEAQVINHSL LNDFDEVDLEGDLSFYDLEIEASCGFDDFKNFIESWSEFLHSQ
Sequences:
>Translated_123_residues MEFEFRKDFFSDQATVKLSMDHEAFATWLEQEGQSIPWVEALLVNISAVQKRVVTDFKLVGSEFSLLLNNDEAQVINHSL LNDFDEVDLEGDLSFYDLEIEASCGFDDFKNFIESWSEFLHSQ >Mature_123_residues MEFEFRKDFFSDQATVKLSMDHEAFATWLEQEGQSIPWVEALLVNISAVQKRVVTDFKLVGSEFSLLLNNDEAQVINHSL LNDFDEVDLEGDLSFYDLEIEASCGFDDFKNFIESWSEFLHSQ
Specific function: Unknown
COG id: COG3112
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0231 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008249 - ProDom: PD020773 [H]
Pfam domain/function: PF06062 UPF0231 [H]
EC number: NA
Molecular weight: Translated: 14239; Mature: 14239
Theoretical pI: Translated: 3.83; Mature: 3.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFEFRKDFFSDQATVKLSMDHEAFATWLEQEGQSIPWVEALLVNISAVQKRVVTDFKLV CCCCHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH GSEFSLLLNNDEAQVINHSLLNDFDEVDLEGDLSFYDLEIEASCGFDDFKNFIESWSEFL CCCEEEEECCCHHHHHHHHHHCCHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHH HSQ CCC >Mature Secondary Structure MEFEFRKDFFSDQATVKLSMDHEAFATWLEQEGQSIPWVEALLVNISAVQKRVVTDFKLV CCCCHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH GSEFSLLLNNDEAQVINHSLLNDFDEVDLEGDLSFYDLEIEASCGFDDFKNFIESWSEFL CCCEEEEECCCHHHHHHHHHHCCHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHH HSQ CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA