Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

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The map label for this gene is 119946520

Identifier: 119946520

GI number: 119946520

Start: 3574897

End: 3575268

Strand: Reverse

Name: 119946520

Synonym: Ping_2897

Alternate gene names: NA

Gene position: 3575268-3574897 (Counterclockwise)

Preceding gene: 119946521

Following gene: 119946510

Centisome position: 78.41

GC content: 37.63

Gene sequence:

>372_bases
ATGGAATTTGAATTTAGAAAAGATTTTTTTAGTGACCAGGCGACTGTAAAGTTATCGATGGATCATGAAGCTTTTGCCAC
TTGGTTAGAGCAGGAGGGGCAGTCTATCCCTTGGGTCGAAGCGCTGTTAGTTAATATTTCAGCGGTGCAAAAGCGCGTGG
TGACTGATTTTAAATTAGTCGGCAGCGAGTTTTCGTTGTTACTCAATAATGACGAAGCTCAAGTTATTAATCATAGTTTG
TTAAATGATTTTGATGAGGTTGATTTAGAAGGAGACTTATCATTTTATGACTTGGAGATTGAAGCATCCTGTGGATTCGA
TGATTTTAAGAACTTCATCGAATCATGGTCAGAATTTTTACACAGCCAATAA

Upstream 100 bases:

>100_bases
ACTAAAACATCGTTTTATATCTCACCAGGATGTGTTTTAAGCTGTATAAATAAACAGAAAATGAATGGATTTGGTATAAC
CTATAGGTTTGAAATAAAGT

Downstream 100 bases:

>100_bases
AATTATACTTTTAATACTATTATGATTTAGATGATTTAGATGATTTAGATGATTTTATGAATTCATTAAAGCAAATTATG
GTTATCATTTTTACACAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MEFEFRKDFFSDQATVKLSMDHEAFATWLEQEGQSIPWVEALLVNISAVQKRVVTDFKLVGSEFSLLLNNDEAQVINHSL
LNDFDEVDLEGDLSFYDLEIEASCGFDDFKNFIESWSEFLHSQ

Sequences:

>Translated_123_residues
MEFEFRKDFFSDQATVKLSMDHEAFATWLEQEGQSIPWVEALLVNISAVQKRVVTDFKLVGSEFSLLLNNDEAQVINHSL
LNDFDEVDLEGDLSFYDLEIEASCGFDDFKNFIESWSEFLHSQ
>Mature_123_residues
MEFEFRKDFFSDQATVKLSMDHEAFATWLEQEGQSIPWVEALLVNISAVQKRVVTDFKLVGSEFSLLLNNDEAQVINHSL
LNDFDEVDLEGDLSFYDLEIEASCGFDDFKNFIESWSEFLHSQ

Specific function: Unknown

COG id: COG3112

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0231 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008249
- ProDom:   PD020773 [H]

Pfam domain/function: PF06062 UPF0231 [H]

EC number: NA

Molecular weight: Translated: 14239; Mature: 14239

Theoretical pI: Translated: 3.83; Mature: 3.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFEFRKDFFSDQATVKLSMDHEAFATWLEQEGQSIPWVEALLVNISAVQKRVVTDFKLV
CCCCHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
GSEFSLLLNNDEAQVINHSLLNDFDEVDLEGDLSFYDLEIEASCGFDDFKNFIESWSEFL
CCCEEEEECCCHHHHHHHHHHCCHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHH
HSQ
CCC
>Mature Secondary Structure
MEFEFRKDFFSDQATVKLSMDHEAFATWLEQEGQSIPWVEALLVNISAVQKRVVTDFKLV
CCCCHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
GSEFSLLLNNDEAQVINHSLLNDFDEVDLEGDLSFYDLEIEASCGFDDFKNFIESWSEFL
CCCEEEEECCCHHHHHHHHHHCCHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHH
HSQ
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA