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The map label for this gene is arbB [H]

Identifier: 119946466

GI number: 119946466

Start: 3491591

End: 3492994

Strand: Direct

Name: arbB [H]

Synonym: Ping_2841

Alternate gene names: 119946466

Gene position: 3491591-3492994 (Clockwise)

Preceding gene: 119946464

Following gene: 119946481

Centisome position: 76.58

GC content: 42.81

Gene sequence:

>1404_bases
ATGTCTTTTCGTTTTCCAAATGATTTTTTATGGGGTGGAGCAACCGCTGCCAACCAGATTGAGGGAGCACATACCATTGA
TGGAAAAGGGTTATCAACTTCTGATGTACAACCTTTTGGCTCCTTCGGTGAACTAAAATCGCGTAAAGAGGGTGATTTTA
ACATTAAAGATATTGCTATCGATTTTTACCATCGTTATCCGCAGGATATTGCATTATTTGCAGAACTTGGATTCACCTGT
TTTCGTTTATCTATCGCCTGGAGCCGAATTTTCCCCAAGGGGGATGAACAAGAGCCTAATGAATTAGGTTTGGCCTATTA
CGATAAAATATTTAATGAATTAGAGAAATATGGCATTGTCCCTATTGTTACCCTCTCCCACTATGAGATGCCTTTATATC
TGGCAGAGCAATACCAGGGCTGGAAAAGCAGAGAATTAATCGGTTTTTTTGAACGTTATGCTCGTACTGTGTTTGCCCGA
TACGGCAACAGCGTAAAACATTGGCTAACCTTTAATGAGATAAATATCTCCCTGCATGAACCTTTCACCGGGGCGGGCAT
TCCGCGCGGCAGTGACGCACAAAGCCTTTATCAAGGCATGCACCATCAACTTGTGGCCAGTGCCAAAGCCGTTAAAGCCT
GCCATGAGCTGTTGCCCGATGCGAAAATAGGCAATATGATGTTAGGCGCAATTCAATATCCTTACACCTGCCACCCCGAT
GATATCTTTGCTGCTATGCAGGAAAATCGCGATTGGTTATTTTTCGGTGATGTGCAATGCCGTGGTTATTATCCAAGTTA
TATGGCACGTAAATTTAAAGAGCTGGGTGTTAAGCTGGATATTAGTGAGGCCGATAAAGAAACCTTAAAAGAGACAGTTG
ATTTTGTCTCTTTTAGCTATTACATGACAGGCTGTGTCAGCACCCATCAAGAGGTGGAAATACTCGATAAAAAAGCATTA
AAAATGGGCAGTAATCCTTATTTAAAAACCACCGACTGGGGATGGCAAATTGATCCTAAAGGTCTGCGGATTGTGCTTAA
TTTACTCTATGATCGTTACCAGAAACCGTTATTTATTGTTGAAAATGGCTTAGGTGCGGTTGATAAGCCCAATGAGAAGG
GCGAGATTGAGGATGATTATCGTATTGCCTATCTTAATGATCACCTCTATCAAGTGGGTGAAGCGCTGCAGGATGGTGTA
GAGGTGATGGGTTATACCTGTTGGGGACCGATTGATTTAGTCAGTGCCTCAACGGCGCAGATGTCGAAACGTTATGGCCT
TATCTATGTTGACAGCGATGATCAGGGCAAAGGCAGCTTAGTGCGCAAACGTAAAAAAAGCTTTTACTGGTATCAGGATC
TGATTAAGTCACAGGGTGAAAATCTCACCCCGCCATCTGCATAA

Upstream 100 bases:

>100_bases
TCCATAACCTATTATAATTGGGTTGTGGAGCGCATTTATTTCCTTTTAAATTAGTGTATCTTATCTTAAGTACAATCCAG
CGCATTTATTAGGAGCTTTT

Downstream 100 bases:

>100_bases
GACTCAGAGTTAAGTTAAAGAAAATACTTTTCCTTTAACTTAACCGGATGACTCACCAGCTTCTTTGGCATAGGTGCTGT
TGTGATCGCTACGAATATAA

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 466

Protein sequence:

>467_residues
MSFRFPNDFLWGGATAANQIEGAHTIDGKGLSTSDVQPFGSFGELKSRKEGDFNIKDIAIDFYHRYPQDIALFAELGFTC
FRLSIAWSRIFPKGDEQEPNELGLAYYDKIFNELEKYGIVPIVTLSHYEMPLYLAEQYQGWKSRELIGFFERYARTVFAR
YGNSVKHWLTFNEINISLHEPFTGAGIPRGSDAQSLYQGMHHQLVASAKAVKACHELLPDAKIGNMMLGAIQYPYTCHPD
DIFAAMQENRDWLFFGDVQCRGYYPSYMARKFKELGVKLDISEADKETLKETVDFVSFSYYMTGCVSTHQEVEILDKKAL
KMGSNPYLKTTDWGWQIDPKGLRIVLNLLYDRYQKPLFIVENGLGAVDKPNEKGEIEDDYRIAYLNDHLYQVGEALQDGV
EVMGYTCWGPIDLVSASTAQMSKRYGLIYVDSDDQGKGSLVRKRKKSFYWYQDLIKSQGENLTPPSA

Sequences:

>Translated_467_residues
MSFRFPNDFLWGGATAANQIEGAHTIDGKGLSTSDVQPFGSFGELKSRKEGDFNIKDIAIDFYHRYPQDIALFAELGFTC
FRLSIAWSRIFPKGDEQEPNELGLAYYDKIFNELEKYGIVPIVTLSHYEMPLYLAEQYQGWKSRELIGFFERYARTVFAR
YGNSVKHWLTFNEINISLHEPFTGAGIPRGSDAQSLYQGMHHQLVASAKAVKACHELLPDAKIGNMMLGAIQYPYTCHPD
DIFAAMQENRDWLFFGDVQCRGYYPSYMARKFKELGVKLDISEADKETLKETVDFVSFSYYMTGCVSTHQEVEILDKKAL
KMGSNPYLKTTDWGWQIDPKGLRIVLNLLYDRYQKPLFIVENGLGAVDKPNEKGEIEDDYRIAYLNDHLYQVGEALQDGV
EVMGYTCWGPIDLVSASTAQMSKRYGLIYVDSDDQGKGSLVRKRKKSFYWYQDLIKSQGENLTPPSA
>Mature_466_residues
SFRFPNDFLWGGATAANQIEGAHTIDGKGLSTSDVQPFGSFGELKSRKEGDFNIKDIAIDFYHRYPQDIALFAELGFTCF
RLSIAWSRIFPKGDEQEPNELGLAYYDKIFNELEKYGIVPIVTLSHYEMPLYLAEQYQGWKSRELIGFFERYARTVFARY
GNSVKHWLTFNEINISLHEPFTGAGIPRGSDAQSLYQGMHHQLVASAKAVKACHELLPDAKIGNMMLGAIQYPYTCHPDD
IFAAMQENRDWLFFGDVQCRGYYPSYMARKFKELGVKLDISEADKETLKETVDFVSFSYYMTGCVSTHQEVEILDKKALK
MGSNPYLKTTDWGWQIDPKGLRIVLNLLYDRYQKPLFIVENGLGAVDKPNEKGEIEDDYRIAYLNDHLYQVGEALQDGVE
VMGYTCWGPIDLVSASTAQMSKRYGLIYVDSDDQGKGSLVRKRKKSFYWYQDLIKSQGENLTPPSA

Specific function: Can Hydrolyze Salicin And Arbutin. [C]

COG id: COG2723

COG function: function code G; Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 1 family [H]

Homologues:

Organism=Homo sapiens, GI32481206, Length=481, Percent_Identity=28.8981288981289, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI13273313, Length=477, Percent_Identity=27.4633123689727, Blast_Score=172, Evalue=6e-43,
Organism=Homo sapiens, GI110681710, Length=496, Percent_Identity=28.4274193548387, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI28376633, Length=468, Percent_Identity=29.9145299145299, Blast_Score=155, Evalue=7e-38,
Organism=Homo sapiens, GI24497614, Length=475, Percent_Identity=29.4736842105263, Blast_Score=142, Evalue=6e-34,
Organism=Escherichia coli, GI2367270, Length=462, Percent_Identity=64.7186147186147, Blast_Score=640, Evalue=0.0,
Organism=Escherichia coli, GI1789070, Length=470, Percent_Identity=54.0425531914894, Blast_Score=521, Evalue=1e-149,
Organism=Escherichia coli, GI2367174, Length=474, Percent_Identity=49.789029535865, Blast_Score=451, Evalue=1e-128,
Organism=Caenorhabditis elegans, GI17552856, Length=479, Percent_Identity=30.062630480167, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI17539390, Length=479, Percent_Identity=30.4801670146138, Blast_Score=181, Evalue=5e-46,
Organism=Drosophila melanogaster, GI21356577, Length=461, Percent_Identity=29.7180043383948, Blast_Score=169, Evalue=4e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001360
- InterPro:   IPR018120
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF00232 Glyco_hydro_1 [H]

EC number: =3.2.1.86 [H]

Molecular weight: Translated: 53308; Mature: 53177

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1 ; PS00653 GLYCOSYL_HYDROL_F1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFRFPNDFLWGGATAANQIEGAHTIDGKGLSTSDVQPFGSFGELKSRKEGDFNIKDIAI
CCCCCCCCCCCCCCCHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHEEE
DFYHRYPQDIALFAELGFTCFRLSIAWSRIFPKGDEQEPNELGLAYYDKIFNELEKYGIV
EHHHHCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHHCCCE
PIVTLSHYEMPLYLAEQYQGWKSRELIGFFERYARTVFARYGNSVKHWLTFNEINISLHE
EEEEECCCCCCEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEEC
PFTGAGIPRGSDAQSLYQGMHHQLVASAKAVKACHELLPDAKIGNMMLGAIQYPYTCHPD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCEECCHH
DIFAAMQENRDWLFFGDVQCRGYYPSYMARKFKELGVKLDISEADKETLKETVDFVSFSY
HHHHHHHCCCCEEEEECEEECCCCHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHH
YMTGCVSTHQEVEILDKKALKMGSNPYLKTTDWGWQIDPKGLRIVLNLLYDRYQKPLFIV
HHHHHHCCHHHHHHHHHHHHHCCCCCCEEECCCCCEECCHHHHHHHHHHHHHHCCCEEEE
ENGLGAVDKPNEKGEIEDDYRIAYLNDHLYQVGEALQDGVEVMGYTCWGPIDLVSASTAQ
ECCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCHHHEEEECCCCHHHHCCCHHH
MSKRYGLIYVDSDDQGKGSLVRKRKKSFYWYQDLIKSQGENLTPPSA
HHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SFRFPNDFLWGGATAANQIEGAHTIDGKGLSTSDVQPFGSFGELKSRKEGDFNIKDIAI
CCCCCCCCCCCCCCHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHEEE
DFYHRYPQDIALFAELGFTCFRLSIAWSRIFPKGDEQEPNELGLAYYDKIFNELEKYGIV
EHHHHCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHHCCCE
PIVTLSHYEMPLYLAEQYQGWKSRELIGFFERYARTVFARYGNSVKHWLTFNEINISLHE
EEEEECCCCCCEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEEC
PFTGAGIPRGSDAQSLYQGMHHQLVASAKAVKACHELLPDAKIGNMMLGAIQYPYTCHPD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCEECCHH
DIFAAMQENRDWLFFGDVQCRGYYPSYMARKFKELGVKLDISEADKETLKETVDFVSFSY
HHHHHHHCCCCEEEEECEEECCCCHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHH
YMTGCVSTHQEVEILDKKALKMGSNPYLKTTDWGWQIDPKGLRIVLNLLYDRYQKPLFIV
HHHHHHCCHHHHHHHHHHHHHCCCCCCEEECCCCCEECCHHHHHHHHHHHHHHCCCEEEE
ENGLGAVDKPNEKGEIEDDYRIAYLNDHLYQVGEALQDGVEVMGYTCWGPIDLVSASTAQ
ECCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCHHHEEEECCCCHHHHCCCHHH
MSKRYGLIYVDSDDQGKGSLVRKRKKSFYWYQDLIKSQGENLTPPSA
HHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1732212 [H]