| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is artJ [H]
Identifier: 119946458
GI number: 119946458
Start: 3481234
End: 3482010
Strand: Reverse
Name: artJ [H]
Synonym: Ping_2833
Alternate gene names: 119946458
Gene position: 3482010-3481234 (Counterclockwise)
Preceding gene: 119946459
Following gene: 119946457
Centisome position: 76.37
GC content: 41.18
Gene sequence:
>777_bases ATGAAAAAAATGAGTATGTTGATTGCTCTCTTTACCTTGTCAGTTAATGTTGCACAGGCGAAACAATGGACACAGATTCG AATTGGTGTTGAAGGTGCTTATCCGCCCTTTAGCCAAACAGAAGCTGATGGTAGCGTGACCGGATTTGATATCGATATAG CGAATGCCTTGTGTGCTGAAATGAAGGCAGACTGTACCTTAATCAAACAAGATTGGGATGGTATTATTCCTGCATTAATG GCACGTAAATTTGATGCGATTGTAGCAACAATGGATATTACCGAAGAGCGCAAAAAACGTGTTGCCTTTACCAATAAATA CCAGCATATTCCGGCTCGATTTGCGGCTTTAAAAGGGACTGAGTATCAAGCATCTCCAGCGTTTATGGCGGGTAAAAAAG TGGGTGTACAGCGTGCAACTTCGATGGATCTTTATATTTCTGATAACTACCCGGAAGCTGAAATCAAACGTTATGGCTCT GCCGATGAAGCCTATCTGGATCTTAAAGCAGGTCGCCTAGACTATATAATGGCCGACTCAGCGGCAATTACCGGTGGCTT ATTAGAAAAAGAAGGCGGTGATAAATTTGAACTTGTGGGTCCTAAACTAAACGATCCTAAATGGTTTGGTGAAGGTGCTG GTATTGCCGTGCGTCAACAAGATAAAGATCTTGTTGACCAATTTAATGCTGCTATTAAAGCGATTCGTGCCGATGGGACT TATCAAACAATTCAAGATAAATACTTTACCTTTGATGTTTATGGTAGTGAAGAATAA
Upstream 100 bases:
>100_bases TATTTTTTCAAACCCTTCATCTGAACGTTTTAAACAATTCATCTCCTCAGTTTACTAACCCTGAAACTTCACTTTACTTT ACTTAAATTAAGGATATAAC
Downstream 100 bases:
>100_bases GCGCTGATTAAATGCTTATCTTCCCCCTTGTTTTGAATCTATAGGTTCAAAACGAGGCAGGACTGAAAGGATGGGAAACC ATCCTTTTTTATTAAAAAAG
Product: ABC amino acid transporter extracellular solute-binding protein, family 3
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MKKMSMLIALFTLSVNVAQAKQWTQIRIGVEGAYPPFSQTEADGSVTGFDIDIANALCAEMKADCTLIKQDWDGIIPALM ARKFDAIVATMDITEERKKRVAFTNKYQHIPARFAALKGTEYQASPAFMAGKKVGVQRATSMDLYISDNYPEAEIKRYGS ADEAYLDLKAGRLDYIMADSAAITGGLLEKEGGDKFELVGPKLNDPKWFGEGAGIAVRQQDKDLVDQFNAAIKAIRADGT YQTIQDKYFTFDVYGSEE
Sequences:
>Translated_258_residues MKKMSMLIALFTLSVNVAQAKQWTQIRIGVEGAYPPFSQTEADGSVTGFDIDIANALCAEMKADCTLIKQDWDGIIPALM ARKFDAIVATMDITEERKKRVAFTNKYQHIPARFAALKGTEYQASPAFMAGKKVGVQRATSMDLYISDNYPEAEIKRYGS ADEAYLDLKAGRLDYIMADSAAITGGLLEKEGGDKFELVGPKLNDPKWFGEGAGIAVRQQDKDLVDQFNAAIKAIRADGT YQTIQDKYFTFDVYGSEE >Mature_258_residues MKKMSMLIALFTLSVNVAQAKQWTQIRIGVEGAYPPFSQTEADGSVTGFDIDIANALCAEMKADCTLIKQDWDGIIPALM ARKFDAIVATMDITEERKKRVAFTNKYQHIPARFAALKGTEYQASPAFMAGKKVGVQRATSMDLYISDNYPEAEIKRYGS ADEAYLDLKAGRLDYIMADSAAITGGLLEKEGGDKFELVGPKLNDPKWFGEGAGIAVRQQDKDLVDQFNAAIKAIRADGT YQTIQDKYFTFDVYGSEE
Specific function: Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Binds L-arginine with high affinity [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787085, Length=251, Percent_Identity=39.8406374501992, Blast_Score=190, Evalue=8e-50, Organism=Escherichia coli, GI1788649, Length=254, Percent_Identity=36.2204724409449, Blast_Score=188, Evalue=3e-49, Organism=Escherichia coli, GI1787088, Length=251, Percent_Identity=41.0358565737052, Blast_Score=184, Evalue=4e-48, Organism=Escherichia coli, GI1788648, Length=233, Percent_Identity=37.7682403433476, Blast_Score=180, Evalue=1e-46, Organism=Escherichia coli, GI1788228, Length=236, Percent_Identity=30.0847457627119, Blast_Score=122, Evalue=3e-29, Organism=Escherichia coli, GI1787031, Length=246, Percent_Identity=28.8617886178862, Blast_Score=103, Evalue=8e-24,
Paralogues:
None
Copy number: 1180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 28506; Mature: 28506
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKMSMLIALFTLSVNVAQAKQWTQIRIGVEGAYPPFSQTEADGSVTGFDIDIANALCAE CCHHHHHHHHHHHHCCHHHCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEHHHHHHHHH MKADCTLIKQDWDGIIPALMARKFDAIVATMDITEERKKRVAFTNKYQHIPARFAALKGT HHCCEEEEECCCCHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHCCHHHCCHHHHHCCCC EYQASPAFMAGKKVGVQRATSMDLYISDNYPEAEIKRYGSADEAYLDLKAGRLDYIMADS CCCCCCCHHCCCHHCCEEECEEEEEEECCCCHHHHHHCCCCCCEEEEEECCCEEEEEECC AAITGGLLEKEGGDKFELVGPKLNDPKWFGEGAGIAVRQQDKDLVDQFNAAIKAIRADGT CHHCCCCEECCCCCEEEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCC YQTIQDKYFTFDVYGSEE CEECCCCEEEEEEECCCC >Mature Secondary Structure MKKMSMLIALFTLSVNVAQAKQWTQIRIGVEGAYPPFSQTEADGSVTGFDIDIANALCAE CCHHHHHHHHHHHHCCHHHCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEHHHHHHHHH MKADCTLIKQDWDGIIPALMARKFDAIVATMDITEERKKRVAFTNKYQHIPARFAALKGT HHCCEEEEECCCCHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHCCHHHCCHHHHHCCCC EYQASPAFMAGKKVGVQRATSMDLYISDNYPEAEIKRYGSADEAYLDLKAGRLDYIMADS CCCCCCCHHCCCHHCCEEECEEEEEEECCCCHHHHHHCCCCCCEEEEEECCCEEEEEECC AAITGGLLEKEGGDKFELVGPKLNDPKWFGEGAGIAVRQQDKDLVDQFNAAIKAIRADGT CHHCCCCEECCCCCEEEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCC YQTIQDKYFTFDVYGSEE CEECCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501075; 8905232; 9278503; 9298646; 9600841 [H]