| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946452
Identifier: 119946452
GI number: 119946452
Start: 3475269
End: 3476294
Strand: Reverse
Name: 119946452
Synonym: Ping_2827
Alternate gene names: NA
Gene position: 3476294-3475269 (Counterclockwise)
Preceding gene: 119946453
Following gene: 119946451
Centisome position: 76.24
GC content: 40.55
Gene sequence:
>1026_bases ATGGCGGTATTACGCATTGGCGATTTTGATATTTTACCTGGAACAGATCAAAAAATAGATCTCCCTGTCGCAAAGTTGTA CACAGATTCGAATGTTTCCTTACCAGTTCATATAATTCGGGCTAAAAAACCTGGTCCAACCATTTTTATAAGCGCGGCTG TACATGGTGACGAGCTTAATGGTATTGAGATAATTAGACGTTTACTCAAGTTGAAAAGCTTTAAGCTGACCCGTGGAACT TTGATTGCAGTGCCGATGGTGAATGTTTACGGTGTGGTCAACCTAAGCCGTTATATGCCGGATCGTCGTGATTTAAACCG CAGTTTTCCAGGTTCGTCAAAGGGCTCTTTAGCGGGGCGAGTCGCGCATATATTCCTTACCCAAATTGTTAAACATTGTG ATTACGGTATAGATTTACACACCGGGGCTATTCACCGCTCTAATTTACCCCAAATTAGAGCAGATTTATCTGATCCTGAA ACGAAAGAACTGGCACTTATTTTTAATGCGCCGGTTATTCTAAATTCAAATCTGGTCGATGGATCCCTAAGAGAAGCTGC TGTTGAAAATAACACTAAAGTATTACTTTATGAAGCGGGTGAAGCATTACGATTTGATGAATTTTCAATTAGATTAGGTA TTAAAGGCATTTTAAATGTATTAGCGCACTTAAACATGGTCAAAAAACAACTTTCAAAACGCAAAAAAATTGAACCCTTT ATCGCTAACAGCAGCAGTTGGTTACGCGCTAATGCAAGTGGCATAGTTAATCATGAACGCCATCTAGGTGACCAGGTTAA GAAAGGTGATCTTTTAGCTGAAATTGGTTCTCCTTACGGAGAGATCATTAATGTTGTGAAAGCCGCTCGTGCGGGCATTA TTATTGGAAAACAAAATATTCCATTAGTGCAGGAGGGGGAGGCGATGTATCACATAGCCTACTTCAGCGAGGATGATGCT TTAATCGCAGGACAAATTGAAAATGTGCAGGGCCAGGTAGAAGCTGACGGGCAAGCAATATTTTAA
Upstream 100 bases:
>100_bases GGCAAAAATATTGCGGGTATGGTATTCGAATTTCTCGAAAAAAATATGAAAGCTGAGCATTCGAATAAAACCCGTGGACG TGGCTGATTAAGGATTGATC
Downstream 100 bases:
>100_bases AGAGTTATAAAATATATAGCCATTCAAGCGAAGATTAATGTGCCGGCATAGGGTACTTATTTGCTTAAAATGATTACGCT ATAATTTAAAAATAGGTGAT
Product: succinylglutamate desuccinylase/aspartoacylase
Products: NA
Alternate protein names: Ectoine Utilization Protein EutE; Deacylase; Succinylglutamate Desuccinylase / Aspartoacylase Family; Succinate Dehydrogenase Subunit Sdh; Succinate Dehydrogenase Subunit; Succinylglutamatedesuccinylase/Aspartoacylase; AstE/AspA Family Protein; N-Acetyl Diamonbutyric Acid Acylase; Deacylase-Like; Succinylglutamate Desuccinylase; Succinylglutamate Desuccinylase/Aspartoacylase Family; Serine Protease; Aminoacylase-2/Carboxypeptidase-Z Family Hydrolase
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MAVLRIGDFDILPGTDQKIDLPVAKLYTDSNVSLPVHIIRAKKPGPTIFISAAVHGDELNGIEIIRRLLKLKSFKLTRGT LIAVPMVNVYGVVNLSRYMPDRRDLNRSFPGSSKGSLAGRVAHIFLTQIVKHCDYGIDLHTGAIHRSNLPQIRADLSDPE TKELALIFNAPVILNSNLVDGSLREAAVENNTKVLLYEAGEALRFDEFSIRLGIKGILNVLAHLNMVKKQLSKRKKIEPF IANSSSWLRANASGIVNHERHLGDQVKKGDLLAEIGSPYGEIINVVKAARAGIIIGKQNIPLVQEGEAMYHIAYFSEDDA LIAGQIENVQGQVEADGQAIF
Sequences:
>Translated_341_residues MAVLRIGDFDILPGTDQKIDLPVAKLYTDSNVSLPVHIIRAKKPGPTIFISAAVHGDELNGIEIIRRLLKLKSFKLTRGT LIAVPMVNVYGVVNLSRYMPDRRDLNRSFPGSSKGSLAGRVAHIFLTQIVKHCDYGIDLHTGAIHRSNLPQIRADLSDPE TKELALIFNAPVILNSNLVDGSLREAAVENNTKVLLYEAGEALRFDEFSIRLGIKGILNVLAHLNMVKKQLSKRKKIEPF IANSSSWLRANASGIVNHERHLGDQVKKGDLLAEIGSPYGEIINVVKAARAGIIIGKQNIPLVQEGEAMYHIAYFSEDDA LIAGQIENVQGQVEADGQAIF >Mature_340_residues AVLRIGDFDILPGTDQKIDLPVAKLYTDSNVSLPVHIIRAKKPGPTIFISAAVHGDELNGIEIIRRLLKLKSFKLTRGTL IAVPMVNVYGVVNLSRYMPDRRDLNRSFPGSSKGSLAGRVAHIFLTQIVKHCDYGIDLHTGAIHRSNLPQIRADLSDPET KELALIFNAPVILNSNLVDGSLREAAVENNTKVLLYEAGEALRFDEFSIRLGIKGILNVLAHLNMVKKQLSKRKKIEPFI ANSSSWLRANASGIVNHERHLGDQVKKGDLLAEIGSPYGEIINVVKAARAGIIIGKQNIPLVQEGEAMYHIAYFSEDDAL IAGQIENVQGQVEADGQAIF
Specific function: Unknown
COG id: COG3608
COG function: function code R; Predicted deacylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37404; Mature: 37273
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVLRIGDFDILPGTDQKIDLPVAKLYTDSNVSLPVHIIRAKKPGPTIFISAAVHGDELN CEEEEECCEECCCCCCCEECCCCEEEEECCCCCEEEEEEEECCCCCEEEEEEEECCCCCC GIEIIRRLLKLKSFKLTRGTLIAVPMVNVYGVVNLSRYMPDRRDLNRSFPGSSKGSLAGR HHHHHHHHHHHHCCEECCCCEEEEEHHHHHHHEEHHHHCCCHHHCCCCCCCCCCCCHHHH VAHIFLTQIVKHCDYGIDLHTGAIHRSNLPQIRADLSDPETKELALIFNAPVILNSNLVD HHHHHHHHHHHHCCCCCEEECCCEECCCCCHHHHCCCCCCCCEEEEEEECCEEEECCCCC GSLREAAVENNTKVLLYEAGEALRFDEFSIRLGIKGILNVLAHLNMVKKQLSKRKKIEPF CHHHHHHHCCCCEEEEEECCCEEEEECEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCE IANSSSWLRANASGIVNHERHLGDQVKKGDLLAEIGSPYGEIINVVKAARAGIIIGKQNI ECCCCCEEEECCCCCCCCHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHCCEEEECCCC PLVQEGEAMYHIAYFSEDDALIAGQIENVQGQVEADGQAIF CEEECCCEEEEEEEECCCCCEEEEEECCCCCEEECCCCCCC >Mature Secondary Structure AVLRIGDFDILPGTDQKIDLPVAKLYTDSNVSLPVHIIRAKKPGPTIFISAAVHGDELN EEEEECCEECCCCCCCEECCCCEEEEECCCCCEEEEEEEECCCCCEEEEEEEECCCCCC GIEIIRRLLKLKSFKLTRGTLIAVPMVNVYGVVNLSRYMPDRRDLNRSFPGSSKGSLAGR HHHHHHHHHHHHCCEECCCCEEEEEHHHHHHHEEHHHHCCCHHHCCCCCCCCCCCCHHHH VAHIFLTQIVKHCDYGIDLHTGAIHRSNLPQIRADLSDPETKELALIFNAPVILNSNLVD HHHHHHHHHHHHCCCCCEEECCCEECCCCCHHHHCCCCCCCCEEEEEEECCEEEECCCCC GSLREAAVENNTKVLLYEAGEALRFDEFSIRLGIKGILNVLAHLNMVKKQLSKRKKIEPF CHHHHHHHCCCCEEEEEECCCEEEEECEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCE IANSSSWLRANASGIVNHERHLGDQVKKGDLLAEIGSPYGEIINVVKAARAGIIIGKQNI ECCCCCEEEECCCCCCCCHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHCCEEEECCCC PLVQEGEAMYHIAYFSEDDALIAGQIENVQGQVEADGQAIF CEEECCCEEEEEEEECCCCCEEEEEECCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA