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The map label for this gene is rimK [H]

Identifier: 119946451

GI number: 119946451

Start: 3474710

End: 3475165

Strand: Reverse

Name: rimK [H]

Synonym: Ping_2826

Alternate gene names: 119946451

Gene position: 3475165-3474710 (Counterclockwise)

Preceding gene: 119946452

Following gene: 119946436

Centisome position: 76.22

GC content: 35.31

Gene sequence:

>456_bases
ATGACACAAAATAATAGAATAATTATTGGCCGACTGGAATCTATTTCACTGCCAGATTTAGCGATTGATGACTTACCGGT
TAGAATCGATACGGGTGCTCAAACCTCATCATTACATGTTGATAATATTAAGAAATTTTATAAAAATGGAAAACCCTGGG
TAAAATTTGATATACACCCTGATATTCATAATGTTGACAGCATTGTTCCCTGTAATGCATTAATCTCCGATATCAGAAGA
ATAAAATCTTCAAATGGCAGCATCGAGCAACGTTATGTTATTAACACTCAGATGATCCTTGGCGATAATAGCTGGCCCAT
TGAAATTACCTTAACAGACCGTTCTGATATGAGCTATTTAATGCTATTGGGAAGGGAAGCGATGGCAAAACGAATATTGG
TTGATCCATCGGGTGTTTTTTTAGTGTCTAAGCATTCAAACAAGAACTTAAAATAA

Upstream 100 bases:

>100_bases
GTTATAAAATATATAGCCATTCAAGCGAAGATTAATGTGCCGGCATAGGGTACTTATTTGCTTAAAATGATTACGCTATA
ATTTAAAAATAGGTGATCTT

Downstream 100 bases:

>100_bases
GTTCATTCGAATTTATGATCGATAAAAGTCAGGGGAGTTTGTAAAAAAAGGTTAAGCGCAAAAGCCGCTTAACCTTTTTT
AGGTGATTTTAAGTGCTTTT

Product: aspartyl protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MTQNNRIIIGRLESISLPDLAIDDLPVRIDTGAQTSSLHVDNIKKFYKNGKPWVKFDIHPDIHNVDSIVPCNALISDIRR
IKSSNGSIEQRYVINTQMILGDNSWPIEITLTDRSDMSYLMLLGREAMAKRILVDPSGVFLVSKHSNKNLK

Sequences:

>Translated_151_residues
MTQNNRIIIGRLESISLPDLAIDDLPVRIDTGAQTSSLHVDNIKKFYKNGKPWVKFDIHPDIHNVDSIVPCNALISDIRR
IKSSNGSIEQRYVINTQMILGDNSWPIEITLTDRSDMSYLMLLGREAMAKRILVDPSGVFLVSKHSNKNLK
>Mature_150_residues
TQNNRIIIGRLESISLPDLAIDDLPVRIDTGAQTSSLHVDNIKKFYKNGKPWVKFDIHPDIHNVDSIVPCNALISDIRRI
KSSNGSIEQRYVINTQMILGDNSWPIEITLTDRSDMSYLMLLGREAMAKRILVDPSGVFLVSKHSNKNLK

Specific function: Responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6 [H]

COG id: COG4067

COG function: function code O; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011761
- InterPro:   IPR013651
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR008503
- InterPro:   IPR009007
- InterPro:   IPR004666 [H]

Pfam domain/function: PF05618 DUF785; PF08443 RimK [H]

EC number: NA

Molecular weight: Translated: 17071; Mature: 16940

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQNNRIIIGRLESISLPDLAIDDLPVRIDTGAQTSSLHVDNIKKFYKNGKPWVKFDIHP
CCCCCEEEEEEECCCCCCCEEECCCCEEEECCCCCCEEEHHHHHHHHHCCCCEEEEECCC
DIHNVDSIVPCNALISDIRRIKSSNGSIEQRYVINTQMILGDNSWPIEITLTDRSDMSYL
CCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCCEEEEEEECCCCCHHH
MLLGREAMAKRILVDPSGVFLVSKHSNKNLK
HHHCHHHHHHEEEECCCCEEEEEECCCCCCC
>Mature Secondary Structure 
TQNNRIIIGRLESISLPDLAIDDLPVRIDTGAQTSSLHVDNIKKFYKNGKPWVKFDIHP
CCCCEEEEEEECCCCCCCEEECCCCEEEECCCCCCEEEHHHHHHHHHCCCCEEEEECCC
DIHNVDSIVPCNALISDIRRIKSSNGSIEQRYVINTQMILGDNSWPIEITLTDRSDMSYL
CCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCCEEEEEEECCCCCHHH
MLLGREAMAKRILVDPSGVFLVSKHSNKNLK
HHHCHHHHHHEEEECCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA