| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946320
Identifier: 119946320
GI number: 119946320
Start: 3294884
End: 3296707
Strand: Reverse
Name: 119946320
Synonym: Ping_2690
Alternate gene names: NA
Gene position: 3296707-3294884 (Counterclockwise)
Preceding gene: 119946321
Following gene: 119946319
Centisome position: 72.3
GC content: 30.76
Gene sequence:
>1824_bases GTGGAAAATTATAATAAAAAAGAAACCCCTGCGTATATTATTTGTTCTACAGCTGAGTTCATAACTTTAACTGTAAATTC TAGTATAGAAATCCCTTTTACAAGAGTAGTTATAGATAACTATCAATCATCTGAAGATTTGAAAGGTGCGATTGAAGCAA GGTTGAATCTATCTTTTTCTTTAATTGATTCGAAAGATTGTATCTTACTCTTCTGTAATGACTTAGATGTTAAATCAATT ACCAAAATTAATATCTTTAATGTAGATAAAGCATATTGTTTAGATGAAGACTCAAAACATTTTTATCAAACTGTAATAAA CCCGCAGCTACACAGCCAAGTTTTTTTACCTTTAATTAATTGTGAGCTTATTGCTCAGGAAAAAAGTATAAGTAACTTGA AGACTAATATATTAAAAGAATTTCATTTTTCTCCATGCAATATTGATGAAATCAAAGAATTAAATGTTAAAAACAATATT AAGCTGAGAAATGTAATTGATTTTAAACGAGAGTGTCGGATATTCGGTGATAGTGATTTTTCTTTTCTAGCTGATATATT TACTATTGCCGTATTAATAAAAATTAGTACTGAGTCTAACCAGAACAACAAAGATGAATCGAAGGCCCCGAATTACAAAA AATATAAAGGAGGGTATAATTTTTTACCTAAAGAACATCTATTAATGATTTATCAAGAGTCTGTTGAAGCCTCTTTTTTG GCTGAATTTAGAAAAAATGAGTTATTGAGTAAACTCAATGAGGGGCTTAGGTTTTCAAATCAAGATAATTTTTCATTCGT ATCTTTTGCTTATATATATTTAAAGGCGAAGAGCTATTTTATGAAATCAAACCAAGCATTAAAAGATATAAAAAACTTTC ATCATAGTTTAAAAGAAAATGCTATTTGTGATAATGAAGCTGATCAAGCTATTTACCTTCTGCTTTGTGAGGTCGGTTAT CAAAGCTTATGTGATGACCTTTATATCGAGACTCCTCCACCTATATATGTAGGAAATGATATTGAAAGTCCATCATTAAA AATAAAAAAATTGAGTAAGCAGTTAGATCAAGCTCAAAGCGATAAAGCTGGAGTTGAAAGCCAATTAGAGCAAGCTAAAA ATGATAAAACTGTAGTTGAAAGCCAGTTAAAGCAAGCTCAAAGTGATAAAGCTAGAGTTGAAAGCCAATTAGAGCAAGCT AAAAATGATAAAACTGTAGTTGAAAGGCAGTTAGAGCAAGCTCAAAATGATAAAGCTATAGTTGAAAGGCAGTTAGAGCA AGCTCAAAGTGATAAAGCTATAGTTGAAAGGCAGTTAGAGCAATCTCAAAGTGATAACGATGGAGTTGAAAGGCAGTTAG AGCAAGCTAAAAATGATAAAACTGTAGTTGAAAGGCAGTTAGAGCAAGCTCAAAGTGATAAAACTGTAGTTGAAAGCCAG TTAGAGCAAGCTCAAAGTGATAAAAATGAAGCTGCAAGCCAATTAGAGCAAGCTCAAAGTTATAAAGCTAGATTTGAAAG GCAGTTAGAGCAAGTTCAAAGTGATAAAGCTGGAGTTGAAAGCCAGTTAGAGCAAGCTATAAAGGATGAAAATGAATTTA AACGTATAGATCCTGTTATTAAGAGTGCTAATGACGATAAATCAAAGCATAAATGGAGTGAAGATGAATTTAGAAAAGAT TATATTTGCATCAGTAAAAAAGACTTAATAAACGCTTATCCCGTAACCACATTGAATGGCATTGCAAAAAAAGAAACAAC AAATATTACACAGAGAAATTTTCTGGATAAATTAATAGAAAATAAAAAACAATTAAAAGCGTAG
Upstream 100 bases:
>100_bases TCCGACTCTGAGTCTTGTCATAAAATTGATTTGGGTAATTCAAATTATAGTAATGTTAGTGAAACATTAGACGACGATTT TGATTTTTAAGGAGGCTAGA
Downstream 100 bases:
>100_bases AAAGAATAAGAATAGTTCTACATGATCAGTAATCGGTATTGTGGTTCTGTTTGAATTAATGCTTTCATTAAGTTGTTGTA ACTGGATCTTCATTATAATT
Product: peptidase
Products: NA
Alternate protein names: Adhesin-Like Protein
Number of amino acids: Translated: 607; Mature: 607
Protein sequence:
>607_residues MENYNKKETPAYIICSTAEFITLTVNSSIEIPFTRVVIDNYQSSEDLKGAIEARLNLSFSLIDSKDCILLFCNDLDVKSI TKINIFNVDKAYCLDEDSKHFYQTVINPQLHSQVFLPLINCELIAQEKSISNLKTNILKEFHFSPCNIDEIKELNVKNNI KLRNVIDFKRECRIFGDSDFSFLADIFTIAVLIKISTESNQNNKDESKAPNYKKYKGGYNFLPKEHLLMIYQESVEASFL AEFRKNELLSKLNEGLRFSNQDNFSFVSFAYIYLKAKSYFMKSNQALKDIKNFHHSLKENAICDNEADQAIYLLLCEVGY QSLCDDLYIETPPPIYVGNDIESPSLKIKKLSKQLDQAQSDKAGVESQLEQAKNDKTVVESQLKQAQSDKARVESQLEQA KNDKTVVERQLEQAQNDKAIVERQLEQAQSDKAIVERQLEQSQSDNDGVERQLEQAKNDKTVVERQLEQAQSDKTVVESQ LEQAQSDKNEAASQLEQAQSYKARFERQLEQVQSDKAGVESQLEQAIKDENEFKRIDPVIKSANDDKSKHKWSEDEFRKD YICISKKDLINAYPVTTLNGIAKKETTNITQRNFLDKLIENKKQLKA
Sequences:
>Translated_607_residues MENYNKKETPAYIICSTAEFITLTVNSSIEIPFTRVVIDNYQSSEDLKGAIEARLNLSFSLIDSKDCILLFCNDLDVKSI TKINIFNVDKAYCLDEDSKHFYQTVINPQLHSQVFLPLINCELIAQEKSISNLKTNILKEFHFSPCNIDEIKELNVKNNI KLRNVIDFKRECRIFGDSDFSFLADIFTIAVLIKISTESNQNNKDESKAPNYKKYKGGYNFLPKEHLLMIYQESVEASFL AEFRKNELLSKLNEGLRFSNQDNFSFVSFAYIYLKAKSYFMKSNQALKDIKNFHHSLKENAICDNEADQAIYLLLCEVGY QSLCDDLYIETPPPIYVGNDIESPSLKIKKLSKQLDQAQSDKAGVESQLEQAKNDKTVVESQLKQAQSDKARVESQLEQA KNDKTVVERQLEQAQNDKAIVERQLEQAQSDKAIVERQLEQSQSDNDGVERQLEQAKNDKTVVERQLEQAQSDKTVVESQ LEQAQSDKNEAASQLEQAQSYKARFERQLEQVQSDKAGVESQLEQAIKDENEFKRIDPVIKSANDDKSKHKWSEDEFRKD YICISKKDLINAYPVTTLNGIAKKETTNITQRNFLDKLIENKKQLKA >Mature_607_residues MENYNKKETPAYIICSTAEFITLTVNSSIEIPFTRVVIDNYQSSEDLKGAIEARLNLSFSLIDSKDCILLFCNDLDVKSI TKINIFNVDKAYCLDEDSKHFYQTVINPQLHSQVFLPLINCELIAQEKSISNLKTNILKEFHFSPCNIDEIKELNVKNNI KLRNVIDFKRECRIFGDSDFSFLADIFTIAVLIKISTESNQNNKDESKAPNYKKYKGGYNFLPKEHLLMIYQESVEASFL AEFRKNELLSKLNEGLRFSNQDNFSFVSFAYIYLKAKSYFMKSNQALKDIKNFHHSLKENAICDNEADQAIYLLLCEVGY QSLCDDLYIETPPPIYVGNDIESPSLKIKKLSKQLDQAQSDKAGVESQLEQAKNDKTVVESQLKQAQSDKARVESQLEQA KNDKTVVERQLEQAQNDKAIVERQLEQAQSDKAIVERQLEQSQSDNDGVERQLEQAKNDKTVVERQLEQAQSDKTVVESQ LEQAQSDKNEAASQLEQAQSYKARFERQLEQVQSDKAGVESQLEQAIKDENEFKRIDPVIKSANDDKSKHKWSEDEFRKD YICISKKDLINAYPVTTLNGIAKKETTNITQRNFLDKLIENKKQLKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69701; Mature: 69701
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENYNKKETPAYIICSTAEFITLTVNSSIEIPFTRVVIDNYQSSEDLKGAIEARLNLSFS CCCCCCCCCCEEEEEECCEEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEE LIDSKDCILLFCNDLDVKSITKINIFNVDKAYCLDEDSKHFYQTVINPQLHSQVFLPLIN EECCCCEEEEEECCCCCCCEEEEEEEECCHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHH CELIAQEKSISNLKTNILKEFHFSPCNIDEIKELNVKNNIKLRNVIDFKRECRIFGDSDF HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCEECCCCCH SFLADIFTIAVLIKISTESNQNNKDESKAPNYKKYKGGYNFLPKEHLLMIYQESVEASFL HHHHHHHHHHHHHEEECCCCCCCCCHHCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHH AEFRKNELLSKLNEGLRFSNQDNFSFVSFAYIYLKAKSYFMKSNQALKDIKNFHHSLKEN HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC AICDNEADQAIYLLLCEVGYQSLCDDLYIETPPPIYVGNDIESPSLKIKKLSKQLDQAQS CCCCCCCHHHHHHHHHHHHHHHHHHHCEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHC DKAGVESQLEQAKNDKTVVESQLKQAQSDKARVESQLEQAKNDKTVVERQLEQAQNDKAI HHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHH VERQLEQAQSDKAIVERQLEQSQSDNDGVERQLEQAKNDKTVVERQLEQAQSDKTVVESQ HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LEQAQSDKNEAASQLEQAQSYKARFERQLEQVQSDKAGVESQLEQAIKDENEFKRIDPVI HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHH KSANDDKSKHKWSEDEFRKDYICISKKDLINAYPVTTLNGIAKKETTNITQRNFLDKLIE HCCCCCHHHCCCCHHHHCCCEEEECHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHH NKKQLKA HHHHHCC >Mature Secondary Structure MENYNKKETPAYIICSTAEFITLTVNSSIEIPFTRVVIDNYQSSEDLKGAIEARLNLSFS CCCCCCCCCCEEEEEECCEEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEE LIDSKDCILLFCNDLDVKSITKINIFNVDKAYCLDEDSKHFYQTVINPQLHSQVFLPLIN EECCCCEEEEEECCCCCCCEEEEEEEECCHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHH CELIAQEKSISNLKTNILKEFHFSPCNIDEIKELNVKNNIKLRNVIDFKRECRIFGDSDF HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCEECCCCCH SFLADIFTIAVLIKISTESNQNNKDESKAPNYKKYKGGYNFLPKEHLLMIYQESVEASFL HHHHHHHHHHHHHEEECCCCCCCCCHHCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHH AEFRKNELLSKLNEGLRFSNQDNFSFVSFAYIYLKAKSYFMKSNQALKDIKNFHHSLKEN HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC AICDNEADQAIYLLLCEVGYQSLCDDLYIETPPPIYVGNDIESPSLKIKKLSKQLDQAQS CCCCCCCHHHHHHHHHHHHHHHHHHHCEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHC DKAGVESQLEQAKNDKTVVESQLKQAQSDKARVESQLEQAKNDKTVVERQLEQAQNDKAI HHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHH VERQLEQAQSDKAIVERQLEQSQSDNDGVERQLEQAKNDKTVVERQLEQAQSDKTVVESQ HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LEQAQSDKNEAASQLEQAQSYKARFERQLEQVQSDKAGVESQLEQAIKDENEFKRIDPVI HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHH KSANDDKSKHKWSEDEFRKDYICISKKDLINAYPVTTLNGIAKKETTNITQRNFLDKLIE HCCCCCHHHCCCCHHHHCCCEEEECHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHH NKKQLKA HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA